Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 16 cluster # 16       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16#0 length = 1401 sequences # 14  
consensus_16#1 length = 266 sequences # 2  

consensusID : consensus_16#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1401
fasta sequence
                              [TCCATTGCTTCGTTACTCGCAGCTTAGAAAAATGACAAGATTGTTTATGCTGGTATGCCTTGGCATAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTGCCGTAAATGCCACTACAGGAAAGGGAAGATTATCATCTCTAGCTGTTCAATCTTTAGATTGCAATACAAATAGCGATACTATGGTGTACATAGCAGACGAGAAAGGTGAAGGTTTAATCGTGTATCATAATTCTGATGATTCCTTCCATCGATTGACTTCCAACACTTTCGATTACGATCCTAAATTTACCAAAATGACGATCGATGGAGAAAGTTACACAGCCCAAGATGGAATTTCTGGAATGGCTCTTAGTCCCATGACTAACAATCTCTATTACAGTCCTGTAGCTTCCACCAGTTTGTATTATGTTAACACGGAACAATTCAGAACATCCGATTATCAACAGAATGACATACATTACGAAGGAGTCCAAAATATTTTGGATACCCAATCGTCCGCTAAAGTAGTATCAAAGAGTGGCGTTCTCTTCTTCGGATTGGTGGGCGATTCAGCTCTTGGCTGCTGGAACGAACATCGAACACTTGAAAGACACAATATCCGTACCGTCGCTCAAAGTGATGAGACTCTTCAAATGATCGCTAGCATGAAGATTAAGGAAGCTCTTCCACACGTGCCTATATTCGATAGGTATATAAACCGTGAATACATATTGGTTTTAAGTAACAAAATGCAAAAAATGGTGAATAATGACTTCAACTTCGACGATGTTAACTTCAGAATTATGAACGCGAATGTAAACGAATTGATATTGAACACTCGTTGCGAAAATCCCGATAATGATCGAACACCTTTCAAAATTTCAATCCATTTGTAAAATCTGAGTTTTTTGTTATATATTAAATATTTCTCGAAATTTCTTTCCATTATGAATGTATAAAATAAATA]

[+] EMBL AF000633             [TCCATTGCTTCGTTACTCGCAGCTTAGAAAAATGACAAGATTGTTTATGCTGGTATGCCTTGGCATAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTGCCGTAAATGCCACTACAGGAAAGGGAAGATTATCATCTCTAGCTGTTCAATCTTTAGATTGCAATACAAATAGCGATACTATGGTGTACATAGCAGACGAGAAAGGTGAAGGTTTAATCGTGTATCATAATTCTGATGATTCCTTCCATCGATTGACTTCCAACACTTTCGATTACGATCCTAAATTTACCAAAATGACGATCGATGGAGAAAGTTACACAGCCCAAGATGGAATTTCTGGAATGGCTCTTAGTCCCATGACTAACAATCTCTATTACAGTCCTGTAGCTTCCACCAGTTTGTATTATGTTAACACGGAACAATTCAGAACATCCGATTATCAACAGAATGACATACATTACGAAGGAGTCCAAAATATTTTGGATACCCAATCGTCCGCTAAAGTAGTATCAAAGAGTGGCGTTCTCTTCTTCGGATTGGTGGGCGATTCAGCTCTTGGCTGCTGGAACGAACATCGAACACTTGAAAGACACAATATCCGTACCGTCGCTCAAAGTGATGAGACTCTTCAAATGATCGCTAGCATGAAGATTAAGGAAGCTCTNCCACACGTGCCTATATTCGATAGGTATATAAACCGTGAATACATATTGGTTTTAAGTAACAAAATGCAAAAAATGGTGAATAATGACTTCAACTTCGACGATGTTAACTTCAGAATTATGAACGCGAATGTAAACGAATTGATATTGAACACTCGTTGCGAAAATCCCGATAATGATCGAACACCTTTCAAAATTTCAATCCATTTGTAAAATCTGAGTTTTTTGTTATATATTAAATATTTCTCGAAATTTCTTTCCATTATGAATGTATAAAATAAATA]
[+] EMBL D79207               [TCCATTGCTTCGTTACTCGCAGCTTAGAAAAATGACAAGATTGTTTATGCTGGTATGCCTTGGCATAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTGCCGTAAATGCCACTACAGGAAAGGGAAGATTATCATCTCTAGCTGTTCAATCTTTAGATTGCAATACAAATAGCGATACTATGGTGTACATAGCAGACGAGAAAGGTGAAGGTTTAATCGTGTATCATAATTCTGATGATTCCTTCCATCGATTGACTTCCAACACTTTCGATTACGATCCTAAATTTACCAAAATGACGATCGATGGAGAAAGTTACACAGCCCAAGATGGAATTTCTGGAATGGCTCTTAGTCCCATGACTAACAATCTCTATTACAGTCCTGTAGCTTCCACCAGTTTGTATTATGTTAACACGGAACAATTCAGAACATCCGATTATCAACAGAATGACATACATTACGAAGGAGTCCAAAATATTTTGGATACCCAATCGTCCGCTAAAGTAGTATCAAAGAGTGGCGTTCTCTTCTTCGGATTGGTGGGCGATTCAGCTCTTGGCTGCTGGAACGAACATCGAACACTTGAAAGACACAATATCCGTACCGTCGCTCAAAGTGATGAGACTCTTCAAATGATCGCTAGCATGAAGATTAAGGAAGCTCTTCCACACGTGCCTATATTCGATAGGTATATAAACCGTGAATACATATTGGTTTTAAGTAACAAAATGCAAAAAATGGTGAATAATGACTTCAACTTCGACGATGTTAACTTCAGAATTATGAACGCGAATGTAAACGAATTGATATTGAACACTCGTTGCGAAAATCCCGATAATGATCGAACACCTTTCAAAATTTCAATCCATTTGTAAAATCTGAGTTTTTTGTTATATATTAAATATTTCTCGAAATTTCTTTCCATTATGAATGTATAAAATAA   ]
[+] EMBL BI512561             [                                          GTTTATGCTGGTATGCCTTGGCATAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI512378             [                                                                     TTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI511390             [                                                                                    AGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTAAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI512304             [                                                                                         ACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI514803             [                                                                                          CATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTGCCGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI513209             [                                                                                          CATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTGCCGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI511164             [                                                                                          CATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BI516885             [                                                                                                  GAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTGCCGTAAATGCCACTACAGGAAAGGGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI512911             [                                                                                                  GAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI515472             [                                                                                                                    AATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTGGTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGACAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTGTTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAATACCACATGATGTTGCCGTAAATGCCACTACAGGAAAGGGAAGATTATCATCTCTAGCTGTTCAATCTTTAGATTGCAATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI516846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CACTACAGGAAAGGGAAGATTATCATCTCTAGCTGTTCAATCTTTAGATTGCAATACAAATAGCGATACTATGGTGTACATAGCAGACGAGAAAGGTGAAGGTTTAATCGTGTATCATAATTCTGATGATTCCTTCCATCGATTGACTTCCAACACTTTCGATTACGATCCTAAATTTACCAAAATGACGATCGATGGAGAAAGTTACACAGCCCAAGATGGAATTTCTGGAATGGCTCTTAGTCCCATGACTAACAATCTCTATTACAGTCCTGTAGCTTCCACCAGTTTGTATTATGTTAACACGGAACAATTCAGAACATCCGATTATCAACAGAATGACATACATTACGAAGGAGTCCAAAATATTTTGGATACCCAATCGTCCGCTAAAGTAGTATCAAAGAGTGGCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI515543             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATAGCAGACGAGAAAGGTGAAGGTTTAATCGTGTATCATAATTCTGATGATTCCTTCCATCGATTGACTTCCAACACTTTCGATTACGATCCTAAATTTACCAAAATGACGATCGATGGAGAAAGTTACACAGCCCAAGATGGAATTTCTGGAATGGCTCTTAGTCCCATGACTAACAATCTCTATTACAGTCCTGTAGCTTCCACCAGTTTGTATTATGTTAACACGGAACAATTCAGAACATCCGATTATCAACAGAATGACATACATTACGAAGGAGTCCAAAATATTTTGGATACCCAATCGTCCGCTAAAGTAGTATCAAAGAGTGGCGTTCTCTTCTTCGGATTGGTGGGCGATTCAGCTCTTGGCTGCTGGAACGAACATCGAACACTTGAAAGACACAATATCCGTACCGTCGCTCAAAGTGATGAGACTCTTCAAATGATCGCTAGCATGAAGATTAAGGAAGCTCTTCCACACGTGCCTATATTCGATAGGTATATAAACCGTGAATACATATTGGTTTTAAGTAACAAAATGCAAAAAATGGTGAATAATGACTTCAACTTCGACGATGTTAACTTC                                                                                                                                                                          ]


>consensus_16#0 TCCATTGCTTCGTTACTCGCAGCTTAGAAAAATGACAAGATTGTTTATGCTGGTATGCCT TGGCATAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATC ATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAG ACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGA CCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTT GAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTG GTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGA CAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTG TTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAAT ACCACATGATGTTGCCGTAAATGCCACTACAGGAAAGGGAAGATTATCATCTCTAGCTGT TCAATCTTTAGATTGCAATACAAATAGCGATACTATGGTGTACATAGCAGACGAGAAAGG TGAAGGTTTAATCGTGTATCATAATTCTGATGATTCCTTCCATCGATTGACTTCCAACAC TTTCGATTACGATCCTAAATTTACCAAAATGACGATCGATGGAGAAAGTTACACAGCCCA AGATGGAATTTCTGGAATGGCTCTTAGTCCCATGACTAACAATCTCTATTACAGTCCTGT AGCTTCCACCAGTTTGTATTATGTTAACACGGAACAATTCAGAACATCCGATTATCAACA GAATGACATACATTACGAAGGAGTCCAAAATATTTTGGATACCCAATCGTCCGCTAAAGT AGTATCAAAGAGTGGCGTTCTCTTCTTCGGATTGGTGGGCGATTCAGCTCTTGGCTGCTG GAACGAACATCGAACACTTGAAAGACACAATATCCGTACCGTCGCTCAAAGTGATGAGAC TCTTCAAATGATCGCTAGCATGAAGATTAAGGAAGCTCTTCCACACGTGCCTATATTCGA TAGGTATATAAACCGTGAATACATATTGGTTTTAAGTAACAAAATGCAAAAAATGGTGAA TAATGACTTCAACTTCGACGATGTTAACTTCAGAATTATGAACGCGAATGTAAACGAATT GATATTGAACACTCGTTGCGAAAATCCCGATAATGATCGAACACCTTTCAAAATTTCAAT CCATTTGTAAAATCTGAGTTTTTTGTTATATATTAAATATTTCTCGAAATTTCTTTCCAT TATGAATGTATAAAATAAATA



consensusID : consensus_16#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 266
fasta sequence
                              [TAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAAAGGAGAACCTTCCTCTTTGAACGTGATATCTAAAAAAAAAAAAAAAAAA]

[+] EMBL BI513633             [TAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTTGAACGTGATATCTAAAAAAAAAAAAAAAAAA]
[+] EMBL BI511743             [                                 GAGGAGAGTCTTTAAACAAATCATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAAAAAAAA                                           ]


>consensus_16#1 TAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATCATTAC CCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAGACAAG ATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGACCAAT GGCATGATAAGATTTTTGTCACCATGCTGAGATACAAAGGAGAACCTTCCTCTTTGAACG TGATATCTAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16#0      TCCATTGCTTCGTTACTCGCAGCTTAGAAAAATGACAAGATTGTTTATGCTGGTATGCCT 60
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TGGCATAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATC 120
consensus_16#1      -----TAGTTTGTCAAGGTACGACAGGCAACATTCTTCGAGGAGAGTCTTTAAACAAATC 55
                         *******************************************************

consensus_16#0      ATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAG 180
consensus_16#1      ATTACCCATCCTTCACGAATGGAAATTCTTTGATTATGATTTCGGTAGCGATGAAAGAAG 115
                    ************************************************************

consensus_16#0      ACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGA 240
consensus_16#1      ACAAGATGCAATTCTATCTGGCGAATACGACTACAAGAATAATTATCCATCCGACATTGA 175
                    ************************************************************

consensus_16#0      CCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAATGGCGTACCTTCCTCTTT 300
consensus_16#1      CCAATGGCATGATAAGATTTTTGTCACCATGCTGAGATACAAAGGAGAACCTTCCTCTTT 235
                    ****************************************** ** * ************

consensus_16#0      GAACGTGATATCTAAAAAGGTCGGTGATGGTGGTCCTCTTCTACAACCTTATCCCGATTG 360
consensus_16#1      GAACGTGATATCTAAAAAAAAAAAAAAAAAA----------------------------- 266
                    ******************        *                                 

consensus_16#0      GTCGTTTGCTAAATATGACGATTGCTCTGGAATCGTGAGCGCCTCAAAACTTGCGATCGA 420
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      CAAATGCGACAGATTGTGGGTTCTGGACTCAGGTCTTGTCAATAATACTCAACCCATGTG 480
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TTCTCCAAAACTGCTCACCTTTGATCTGACTACCTCGCAATTGCTCAAGCAAGTTGAAAT 540
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      ACCACATGATGTTGCCGTAAATGCCACTACAGGAAAGGGAAGATTATCATCTCTAGCTGT 600
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TCAATCTTTAGATTGCAATACAAATAGCGATACTATGGTGTACATAGCAGACGAGAAAGG 660
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TGAAGGTTTAATCGTGTATCATAATTCTGATGATTCCTTCCATCGATTGACTTCCAACAC 720
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TTTCGATTACGATCCTAAATTTACCAAAATGACGATCGATGGAGAAAGTTACACAGCCCA 780
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      AGATGGAATTTCTGGAATGGCTCTTAGTCCCATGACTAACAATCTCTATTACAGTCCTGT 840
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      AGCTTCCACCAGTTTGTATTATGTTAACACGGAACAATTCAGAACATCCGATTATCAACA 900
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      GAATGACATACATTACGAAGGAGTCCAAAATATTTTGGATACCCAATCGTCCGCTAAAGT 960
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      AGTATCAAAGAGTGGCGTTCTCTTCTTCGGATTGGTGGGCGATTCAGCTCTTGGCTGCTG 1020
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      GAACGAACATCGAACACTTGAAAGACACAATATCCGTACCGTCGCTCAAAGTGATGAGAC 1080
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TCTTCAAATGATCGCTAGCATGAAGATTAAGGAAGCTCTTCCACACGTGCCTATATTCGA 1140
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TAGGTATATAAACCGTGAATACATATTGGTTTTAAGTAACAAAATGCAAAAAATGGTGAA 1200
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TAATGACTTCAACTTCGACGATGTTAACTTCAGAATTATGAACGCGAATGTAAACGAATT 1260
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      GATATTGAACACTCGTTGCGAAAATCCCGATAATGATCGAACACCTTTCAAAATTTCAAT 1320
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      CCATTTGTAAAATCTGAGTTTTTTGTTATATATTAAATATTTCTCGAAATTTCTTTCCAT 1380
consensus_16#1      ------------------------------------------------------------
                                                                                

consensus_16#0      TATGAATGTATAAAATAAATA 1401
consensus_16#1      ---------------------
                                         




Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)