These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1634#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 498 fasta sequence [CGTCACAGCACCAGCCTGAGCTCCCACAGCTCGGACAGCGGCGGCACGAATTGCTACCACCACCACCAGCAACCCTCGATGACCGGTTTCTTGACCCACCACGCGAACAAGCTGCACATACTGTCCCCCATCTCCGACAAGTCGTCCCAAGAGCCCGCGTCCGAGACCTCGGACAACAATCGGAACAACAACTCGCAGAAAGCCTCGCCCGAGGAGAACGTGACCACCGAGAACAACGTGACCGCCACGAACAACGTGACCAACACGAACACGAATTCGGTTACCTCGCCGATGGACACGTCGTTCAAGAAGAGGCGGACGCCGCAGAATAAGAATCTGATCAATTTGGTGTTGCAATCCTCGTCGTCGGGCGATGTGGAGATCCAGGGGTCGGACAGCGGGATCTCGATCGAGTCGCGGGCCGGGATCAAGTGCAAACCGTTCGGTTTCCACTTGTTGAAACCGCAATTGGACAATATCAATCTGGTGGACAACGAG] [+] EMBL BI505581 [CGTCACAGCACCAGCCTGAGCTCCCACAGCTCGGACAGCGGCGGCACGAATTGCTACCACCACCACCAGCAACCCTCGATGACCGGTTTCTTGACCCACCACGCGAACAAGCTGCACATACTGTCCCCCATCTCCGACAAGTCGTCCCAAGAGCCCGCGTCCGAGACCTCGGACAACAATCGGAACAACAACTCGCAGAAAGCCTCGCCCGAGGAGAACGTGACCACCGAGAACAACGTGACCGCCACGAACAACGTGACCAACACGAACACGAATTCGGTTACCTCGCCGATGGACACGTCGTTCAAGAAGAGGCGGACGCCGCAGAATAAGAATCTGATCAATTTGGTGTTGCAATCCTCGTCGTCGGGCGATGTGGAGATCCAGGGGTCGGACAGCGGGATCTCGATCGAGTCGCGGGCCGGGATCAAGTGCAAACCGTTCGGTTTCCACTTGTTGAAACCGCAATTGGACAATATCAATCTGGTGGACAACGAG] consensusID : consensus_1634#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 462 fasta sequence [GGACAACAATCGGAACAACAACTCGCAGAAAGCCTCGCCCGAGGAGAACGTGACCACCGAGAACAACGTGACCGCCACGAACAACGTGACCAACACGAACACGACCGGGAACACGAATTCGGTTACCTCGCCGATGGACACGTCGTTCAAGAAGAGGCGGACGCCGCAGAACAAGAATCTGATCAATTTGGCGTTGCAATCCTCGTCGTCGGGCGATGCGGAGATCCAGGGGTCGGACAGCGGGATCTCGATCGAGTCGCGGGCCGGGATCAAGTGCAAACCGTTCGGTTTCCACTTGTTGAAACCGCAATTGGACAATATCAATCTGGTGGACAACGAGCCCGAGCTGTCCGATCTTCCTTTCGACATGCCGAAACTGCGTAGAAGGCGATTGCTTATGCAACAGGACGCGACCACATCTGGGAGCGCGACGAGCGTGGATTTGAGGGACTTGCCGAGACA] [+] EMBL BI516567 [GGACAACAATCGGAACAACAACTCGCAGAAAGCCTCGCCCGAGGAGAACGTGACCACCGAGAACAACGTGACCGCCACGAACAACGTGACCAACACGAACACGACCGGGAACACGAATTCGGTTACCTCGCCGATGGACACGTCGTTCAAGAAGAGGCGGACGCCGCAGAACAAGAATCTGATCAATTTGGCGTTGCAATCCTCGTCGTCGGGCGATGCGGAGATCCAGGGGTCGGACAGCGGGATCTCGATCGAGTCGCGGGCCGGGATCAAGTGCAAACCGTTCGGTTTCCACTTGTTGAAACCGCAATTGGACAATATCAATCTGGTGGACAACGAGCCCGAGCTGTCCGATCTTCCTTTCGACATGCCGAAACTGCGTAGAAGGCGATTGCTTATGCAACAGGACGCGACCACATCTGGGAGCGCGACGAGCGTGGATTTGAGGGACTTGCCGAGACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1634#0 CGTCACAGCACCAGCCTGAGCTCCCACAGCTCGGACAGCGGCGGCACGAATTGCTACCAC 60 consensus_1634#1 ------------------------------------------------------------ consensus_1634#0 CACCACCAGCAACCCTCGATGACCGGTTTCTTGACCCACCACGCGAACAAGCTGCACATA 120 consensus_1634#1 ------------------------------------------------------------ consensus_1634#0 CTGTCCCCCATCTCCGACAAGTCGTCCCAAGAGCCCGCGTCCGAGACCTCGGACAACAAT 180 consensus_1634#1 --------------------------------------------------GGACAACAAT 10 ********** consensus_1634#0 CGGAACAACAACTCGCAGAAAGCCTCGCCCGAGGAGAACGTGACCACCGAGAACAACGTG 240 consensus_1634#1 CGGAACAACAACTCGCAGAAAGCCTCGCCCGAGGAGAACGTGACCACCGAGAACAACGTG 70 ************************************************************ consensus_1634#0 ACCGCCACGAACAACGTGACCAACACGAACACGA------------ATTCGGTTACCTCG 288 consensus_1634#1 ACCGCCACGAACAACGTGACCAACACGAACACGACCGGGAACACGAATTCGGTTACCTCG 130 ********************************** ************** consensus_1634#0 CCGATGGACACGTCGTTCAAGAAGAGGCGGACGCCGCAGAATAAGAATCTGATCAATTTG 348 consensus_1634#1 CCGATGGACACGTCGTTCAAGAAGAGGCGGACGCCGCAGAACAAGAATCTGATCAATTTG 190 ***************************************** ****************** consensus_1634#0 GTGTTGCAATCCTCGTCGTCGGGCGATGTGGAGATCCAGGGGTCGGACAGCGGGATCTCG 408 consensus_1634#1 GCGTTGCAATCCTCGTCGTCGGGCGATGCGGAGATCCAGGGGTCGGACAGCGGGATCTCG 250 * ************************** ******************************* consensus_1634#0 ATCGAGTCGCGGGCCGGGATCAAGTGCAAACCGTTCGGTTTCCACTTGTTGAAACCGCAA 468 consensus_1634#1 ATCGAGTCGCGGGCCGGGATCAAGTGCAAACCGTTCGGTTTCCACTTGTTGAAACCGCAA 310 ************************************************************ consensus_1634#0 TTGGACAATATCAATCTGGTGGACAACGAG------------------------------ 498 consensus_1634#1 TTGGACAATATCAATCTGGTGGACAACGAGCCCGAGCTGTCCGATCTTCCTTTCGACATG 370 ****************************** consensus_1634#0 ------------------------------------------------------------ consensus_1634#1 CCGAAACTGCGTAGAAGGCGATTGCTTATGCAACAGGACGCGACCACATCTGGGAGCGCG 430 consensus_1634#0 -------------------------------- consensus_1634#1 ACGAGCGTGGATTTGAGGGACTTGCCGAGACA 462 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |