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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_164#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 571 fasta sequence
[ATTGGACAAGTGGAATATCGGGATACTCGACGAGTTAATGAAACATCGATGATTAGACAGGAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGGCGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCGTCCTCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGAGATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGATAGTCACAACCGATGTCCGAATTTCATTCGCTAAAACAGTCACGTGTTGTTAAGTCAGGGGAGAGAGGATTGTTCGGTCACGTAAGATAAATACTCGATGGCATACGAAATAAAGAGAATACGTTTCATCTGTTTTACAGAAAAAAAAAAA]
[+] EMBL BI508300 [ATTGGACAAGTGGAATATCGGGATACTCGACGAGTTAATGAAACATCGATGATTAGACAGGAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGGCGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCGTCCTCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGAGATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGATAGTCACAACCGATGTCCGAATTTCATTCGCTAAAACAGTCACGTGTTGTTAAGTCAGGGGAGAGAGGATTGTTCGGTCACGTAAGATAAATACTCGATGGCATACGAAATAAAGAGAATACGTTTCATCTGTTTTACAGAAAAAAAAAAA]
[+] EMBL BI503682 [ATTGGACAAGTGGAATATCGGGATACTCGACGAGTTAATGAAACATCGATGATTAGACAGGAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGGCGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCGTCCTCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGAGATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGATAGTCACAACCGATGTCCGAATTTCATTCGCTAAAACAGTCACGTGTTGTTAAGTCAGGGGAGAGAGGATTGTTCGGTCACGTAAGATAAATACTCGATGGCATACGAAATAAAGAGAATACGTTTCATCTGTTTTACAGAAAAAAAAAA ]
[+] EMBL BI515170 [ CTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGGCGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCATCCTCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGAGATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGATAGTCACAACCGATGTCCGAATTTCATTCGCTAAAAAAGTCACGTGTTGTTAAGTCA GGAGAGAGGATTGTTCGGTCACGTAAGATAAATACTCGATGGCATACGAAATAAAGAGAATACGTTTCATCTGTTTTACAGAAACGAgtgcc]
consensusID : consensus_164#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 557 fasta sequence
[ATTGGACAAGTGGAATATCGGGATACTCGACGAGTTAATGAAACATCGATGATTAGACAGGAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGGCGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCGTCCTCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGAGATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGATAGTCACAACCGATGTCCGAATTTCATTCGCTAAAACAGTCACGTGTTGTTAAGTCAGGGGAGAGAGGATTGTTCGGTCACGTAAGATAAATACTCGATGGCATACGAAATAAAGAGAATACGTTTCAAAAAAAAAA]
[+] EMBL BI510015 [ATTGGACAAGTGGAATATCGGGATACTCGACGAGTTAATGAAACATCGATGATTAGACAGGAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGGCGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCGTCCTCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGAGATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGATAGTCACAACCGATGTCCGAATTTCATTCGCTAAAACAGTCACGTGTTGTTAAGTCAGGGGAGAGAGGATTGTTCGGTCACGTAAGATAAATACTCGATGGCATACGAAATAAAGAGAATACGTTTCAAAAAAAAAA]
[+] EMBL BI509501 [ GTGGAATATCGGGATACTCGACGAGTTAATGAAACATCGATGATTAGACAGGAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGGCGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCGTCCTCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGAGATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGATAGTCACAACCGATG ]
consensusID : consensus_164#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 210 fasta sequence
[GTTAATGAAACGTCGATGATTAGACAGGAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGAACTCCGTNNNAAAAAAAAAAAAAAAAA]
[+] EMBL BI503146 [GTTAATGAAACGTCGATGATTAGACAGGAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTCTTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAGACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGAACTCCGTNNNAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_164#0 ATTGGACAAGTGGAATATCGGGATACTCGACGAGTTAATGAAACATCGATGATTAGACAG 60
consensus_164#1 ATTGGACAAGTGGAATATCGGGATACTCGACGAGTTAATGAAACATCGATGATTAGACAG 60
consensus_164#2 ---------------------------------GTTAATGAAACGTCGATGATTAGACAG 27
*********** ***************
consensus_164#0 GAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTC 120
consensus_164#1 GAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTC 120
consensus_164#2 GAACTCGATGCTTGATGGAGTGTATCGGATCGTGATGGGTTCTCGTTCGATTGTCCGTTC 87
************************************************************
consensus_164#0 TTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAG 180
consensus_164#1 TTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAG 180
consensus_164#2 TTTTTCTACCTGCAGATTTTTATAACGGAGTTCGGCCACGTTCGCGAGTAAAACGAAGAG 147
************************************************************
consensus_164#0 ACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGG 240
consensus_164#1 ACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGATAAGAGAGAGGTCCAATTTGACGG 240
consensus_164#2 ACCGGGTTTCGAAGAGGATGGAAACCGAGTGCCCGAACTCCGTNNNAAAAAAAAAAAAAA 207
************************************ * ** *
consensus_164#0 CGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCGTCC 300
consensus_164#1 CGGATCGTCGTCGAATCGCCCGACACGTGGTAACGTGGAGGAATATCGAATGTCCCGTCC 300
consensus_164#2 AAA--------------------------------------------------------- 210
consensus_164#0 TCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGA 360
consensus_164#1 TCGTTCTCGGCTCATGTACCGAGAACCCAGGATCATCCGTACATTTTACTGTTTATATGA 360
consensus_164#2 ------------------------------------------------------------
consensus_164#0 GATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGA 420
consensus_164#1 GATTAGTTTTTGTACAAAGATTCTATTGTAAATAGGCGAGATAGCCTGGCCCTAGTTGGA 420
consensus_164#2 ------------------------------------------------------------
consensus_164#0 TAGTCACAACCGATGTCCGAATTTCATTCGCTAAAACAGTCACGTGTTGTTAAGTCAGGG 480
consensus_164#1 TAGTCACAACCGATGTCCGAATTTCATTCGCTAAAACAGTCACGTGTTGTTAAGTCAGGG 480
consensus_164#2 ------------------------------------------------------------
consensus_164#0 GAGAGAGGATTGTTCGGTCACGTAAGATAAATACTCGATGGCATACGAAATAAAGAGAAT 540
consensus_164#1 GAGAGAGGATTGTTCGGTCACGTAAGATAAATACTCGATGGCATACGAAATAAAGAGAAT 540
consensus_164#2 ------------------------------------------------------------
consensus_164#0 ACGTTTCATCTGTTTTACAGAAAAAAAAAAA 571
consensus_164#1 ACGTTTCA----------AAAAAAAAA---- 557
consensus_164#2 -------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |