These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1758#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence [TGGCCGCGAAACGAAGCTATAATCAGCCTTTAAACGTGTCGTGTATAGTTTCCGCCTCGATCAAACCGGAAATTCGTGACTCTATGTGTTCTATATGATGACCAGAAATTCAATTGTGTCAATCAATGACTGTAAATATATTACGTCGTGAACAAAAACAGTCTTAGCGGAAGGCGAATAATATTCGCCATATTGCATTTTATTGTTACTAATAATTGGACGCGAGAAAATATTTAAGGAGAAAAATAAGAAATGGAAATAGCATGTACCTCGTTTTCCCTTCTTTGAACAAATTTCTTTTCGTTGCGCGATGCTATTTAGCGATACTGATCGTTGTATCGAATCGTTGTATCAGCAATCAGTAACAATATATATGTATATATATAAACATATGTATATATATATATATGTATATATAGGGTATTGCTTCGATGGATGAATTTAAAATAAAAAGAAATAAAAAATGTAAACATACGTCAATATTTTCTTTGAATTTTTTTTTAATATATTTCATCTTATCTTCATAAAAGATGTTCCAAAAATAATATATCCGAAATTTGAAAATGTTTCATCATTG] [+] EMBL BI509216 [TGGCCGCGAAACGAAGCTATAATCAGCCTTTAAACGTGTCGTGTATAGTTTCCGCCTCGATCAAACCGGAAATTCGTGACTCTATGTGTTCTATATGATGACCAGAAATTCAATTGTGTCAATCAATGACTGTAAATATATTACGTCGTGAACAAAAACAGTCTTAGCGGAAGGCGAATAATATTCGCCATATTGCATTTTATTGTTACTAATAATTGGACGCGAGAAAATATTTAAGGAGAAAAATAAGAAATGGAAATAGCATGTACCTCGTTTTCCCTTCTTTGAACAAATTTCTTTTCGTTGCGCGATGCTATTTAGCGATACTGATCGTTGTATCGAATCGTTGTATCAGCAATCAGTAACAATATATATGTATATATATAAACATATGTATATATATATATATGTATATATAGGGTATTGCTTCGATGGATGAATTTAAAATAAAAAGAAATAAAAAATGTAAACATACGTCAATATTTTCTTTGAATTTTTTTTTAATATATTTCATCTTATCTTCATAAAAGATGTTCCAAAAATAATATATCCGAAATTTGAAAATGTTTCATCATTG] consensusID : consensus_1758#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence [TGGCCGCGAAACGAAGCTATAATCAGCCTTTAAACGTGTCGTGTATAGTTTCCGCCTCGATCAAACCGAAAATTCGTGACTCTATATTCTATATGATGACCAGAAATTCAATTGTGTCAACCAATGACTGTAAATATATTACGTCGTGAACAAAAACAGTCTTAGCGGAAGGCGAATAATATTCGCCATATTGCATTTTATTGTTACTAATAATTGGACGCGAGAAAATATTTAAGGAGAAAAATAAGAAATGGAAATAGCATGTACCTCGTTTTCCCTTCTTTGAACAAATTTCTTTTCGTTGCGCGATGCTATTTAACGATACTGATCGTTGTATCGAATCGTTGTATCAGCAATCAGTAACAATATATATGTATATATATAAACATATGTATATATATATATTTATATACAGGGTATCGCTTCGATGGATGAATTTAAAATAAAAGAAATAAAAAATGTAAACATACGTCAATATTTTCTTTGAATTTGACAAATTTTTTTTTTAATATAT] [+] EMBL BI516078 [TGGCCGCGAAACGAAGCTATAATCAGCCTTTAAACGTGTCGTGTATAGTTTCCGCCTCGATCAAACCGAAAATTCGTGACTCTATATTCTATATGATGACCAGAAATTCAATTGTGTCAACCAATGACTGTAAATATATTACGTCGTGAACAAAAACAGTCTTAGCGGAAGGCGAATAATATTCGCCATATTGCATTTTATTGTTACTAATAATTGGACGCGAGAAAATATTTAAGGAGAAAAATAAGAAATGGAAATAGCATGTACCTCGTTTTCCCTTCTTTGAACAAATTTCTTTTCGTTGCGCGATGCTATTTAACGATACTGATCGTTGTATCGAATCGTTGTATCAGCAATCAGTAACAATATATATGTATATATATAAACATATGTATATATATATATTTATATACAGGGTATCGCTTCGATGGATGAATTTAAAATAAAAGAAATAAAAAATGTAAACATACGTCAATATTTTCTTTGAATTTGACAAATTTTTTTTTTAATATAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1758#0 TGGCCGCGAAACGAAGCTATAATCAGCCTTTAAACGTGTCGTGTATAGTTTCCGCCTCGA 60 consensus_1758#1 TGGCCGCGAAACGAAGCTATAATCAGCCTTTAAACGTGTCGTGTATAGTTTCCGCCTCGA 60 ************************************************************ consensus_1758#0 TCAAACCGGAAATTCGTGACTCTATGTGTTCTATATGATGACCAGAAATTCAATTGTGTC 120 consensus_1758#1 TCAAACCGAAAATTCGTGACTCTATAT--TCTATATGATGACCAGAAATTCAATTGTGTC 118 ******** **************** * ******************************* consensus_1758#0 AATCAATGACTGTAAATATATTACGTCGTGAACAAAAACAGTCTTAGCGGAAGGCGAATA 180 consensus_1758#1 AACCAATGACTGTAAATATATTACGTCGTGAACAAAAACAGTCTTAGCGGAAGGCGAATA 178 ** ********************************************************* consensus_1758#0 ATATTCGCCATATTGCATTTTATTGTTACTAATAATTGGACGCGAGAAAATATTTAAGGA 240 consensus_1758#1 ATATTCGCCATATTGCATTTTATTGTTACTAATAATTGGACGCGAGAAAATATTTAAGGA 238 ************************************************************ consensus_1758#0 GAAAAATAAGAAATGGAAATAGCATGTACCTCGTTTTCCCTTCTTTGAACAAATTTCTTT 300 consensus_1758#1 GAAAAATAAGAAATGGAAATAGCATGTACCTCGTTTTCCCTTCTTTGAACAAATTTCTTT 298 ************************************************************ consensus_1758#0 TCGTTGCGCGATGCTATTTAGCGATACTGATCGTTGTATCGAATCGTTGTATCAGCAATC 360 consensus_1758#1 TCGTTGCGCGATGCTATTTAACGATACTGATCGTTGTATCGAATCGTTGTATCAGCAATC 358 ******************** *************************************** consensus_1758#0 AGTAACAATATATATGTATATATATAAACATATGTATATATATATATATGTATATATAGG 420 consensus_1758#1 AGTAACAATATATATGTATATATATAAACATATGTATATATATATATTT--ATATACAGG 416 *********************************************** * ***** *** consensus_1758#0 GTATTGCTTCGATGGATGAATTTAAAATAAAAAGAAATAAAAAATGTAAACATACGTCAA 480 consensus_1758#1 GTATCGCTTCGATGGATGAATTTAAAATAAAA-GAAATAAAAAATGTAAACATACGTCAA 475 **** *************************** *************************** consensus_1758#0 TATTTTCTTTGAATTTTTTTTTAATATATTTCATCTTATCTTCATAAAAGATGTTCCAAA 540 consensus_1758#1 TATTTTCTTTGAATTT------GACAAATTTTTTTTTTAATATAT--------------- 514 **************** * * **** * ** * ** consensus_1758#0 AATAATATATCCGAAATTTGAAAATGTTTCATCATTG 577 consensus_1758#1 ------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |