These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1803#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 512 fasta sequence [AGATAGAATATGCTTTAGCTGCTGTCGCTGCTGGAGCAGCAAGTGTTGGCATTAAAGCTTCAAATGGAGTTGTTCTTTCCACGGAAAATAAACACAAATCTATATTGTACGATGAACATAGTGTAAAGAAAGTAGAAATAATTACAAAACACATTGGTATGGTATATAGTGGTATGGGTCCAGATTATAGATTATTAGTGAAGCAAGCACGTAAAATTGCACAACAATATCAGCTTATTTATCAAGAACCAATACCTACTGCACAATTGGTACAAAGAGTTGCAATGCTTATGCAAGAATATACACAATCTGGAGGAGTCAGGCCTTTTGGAGTCTCTTTGTTAATTTGTGGCTGGGATAATGGAAAGCCATGTTTATATCAATGTGATCCTTCCGGTGCATATTTTGCATGGAAGGCTACAGCAATGGGTAAAAATTTTGTCAATGGAAAAGTATTTCTGGAGAAAAGATATAGTGAAGATTTGGAATTGGACGATGCTGTTCATACTGCC] [+] EMBL BI515163 [AGATAGAATATGCTTTAGCTGCTGTCGCTGCTGGAGCAGCAAGTGTTGGCATTAAAGCTTCAAATGGAGTTGTTCTTTCCACGGAAAATAAACACAAATCTATATTGTACGATGAACATAGTGTAAAGAAAGTAGAAATAATTACAAAACACATTGGTATGGTATATAGTGGTATGGGTCCAGATTATAGATTATTAGTGAAGCAAGCACGTAAAATTGCACAACAATATCAGCTTATTTATCAAGAACCAATACCTACTGCACAATTGGTACAAAGAGTTGCAATGCTTATGCAAGAATATACACAATCTGGAGGAGTCAGGCCTTTTGGAGTCTCTTTGTTAATTTGTGGCTGGGATAATGGAAAGCCATGTTTATATCAATGTGATCCTTCCGGTGCATATTTTGCATGGAAGGCTACAGCAATGGGTAAAAATTTTGTCAATGGAAAAGTATTTCTGGAGAAAAGATATAGTGAAGATTTGGAATTGGACGATGCTGTTCATACTGCC] consensusID : consensus_1803#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 425 fasta sequence [GGAAGGCTACAGCAATGGGTAAAAATTTTGTCAATGGAAAAGTATTTCTGGAGAAAAGATATAGTGAAGATTTGGAATTGGACGATGCTGTTCATACTGCCATTTTAACTTTAAAGGAAGGATTTGAAGGACAGATGACAGCTGATAATATAGAAATTGGTATTTGTGATGCAAACGGTTTTAGAAGATTGGAACCTTCCAATGTAAAAGATTATCTTGCTAATATTCCTTAAATTTTTATTATTTTTATATTACATTATTACAGTAATCTTTACACAATCAAGAATAAATTAGATTCTTATAATAAAATGTTTTGTTGAAAGTAACATTATTATTCCTTTACTTGTAATATATAATAAGAAAATTTATCTTTAAAATACGAATTTTATCTTTATTCAGATTTCGTTTATAAAAATTTATTCAGA] [-] EMBL BI511886 [GGAAGGCTACAGCAATGGGTAAAAATTTTGTCAATGGAAAAGTATTTCTGGAGAAAAGATATAGTGAAGATTTGGAATTGGACGATGCTGTTCATACTGCCATTTTAACTTTAAAGGAAGGATTTGAAGGACAGATGACAGCTGATAATATAGAAATTGGTATTTGTGATGCAAACGGTTTTAGAAGATTGGAACCTTCCAATGTAAAAGATTATCTTGCTAATATTCCTTAAATTTTTATTATTTTTATATTACATTATTACAGTAATCTTTACACAATCAAGAATAAATTAGATTCTTATAATAAAATGTTTTGTTGAAAGTAACATTATTATTCCTTTACTTGTAATATATAATAAGAAAATTTATCTTTAAAATACGAATTTTATCTTTATTCAGATTTCGTTTATAAAAATTTATTCAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1803#0 AGATAGAATATGCTTTAGCTGCTGTCGCTGCTGGAGCAGCAAGTGTTGGCATTAAAGCTT 60 consensus_1803#1 ------------------------------------------------------------ consensus_1803#0 CAAATGGAGTTGTTCTTTCCACGGAAAATAAACACAAATCTATATTGTACGATGAACATA 120 consensus_1803#1 ---------------------------------GGAAGGCTACAGCAATGGGTAAAAATT 27 ** *** * * * ** ** consensus_1803#0 GTGTAAAGAAAGTAGAAATAATT-ACAAAACACATTGGTATGGTATATAGTGGTATGGGT 179 consensus_1803#1 TTGTCAATGGAAAAGTATTTCTGGAGAAAAGATATAGTGAAGATTTGGAATTGGACGA-T 86 *** ** * ** * * * * **** * ** * * * * * * * * * * * consensus_1803#0 CCAGATTATAGATTATTAGTGAAGCAAGCACGTAAAATTGCACAACA-ATATCAGCTTAT 238 consensus_1803#1 GCTGTTCATACTGCCATTTTAACTTTAAAGGAAGGATTTGAAGGACAGATGACAGCTGAT 146 * * * *** * * * * * *** * *** ** ***** ** consensus_1803#0 TTATCAAGAACCAATACCTACTGCACAATTGGTACAAAGAG-TTGCAATGCTT--ATGCA 295 consensus_1803#1 AATATAGAAATTGGTATTTGTGATGCAAACGGTTTTAGAAGATTGGAACCTTCCAATGTA 206 * ** ** * *** *** * ** *** ** * *** * consensus_1803#0 AGAATATACACAATCTGGAGGAGTCAGGCCTTTTGGAGTCTCTTTGTTAATTTGTGGCTG 355 consensus_1803#1 AAAGATTATCTTGCTAATATTCCTTAAAT-TTTTATTATTTTTATATTACATTATTACAG 265 * * ** * * * **** * * * * *** ** * * * consensus_1803#0 GGATAATGGAA-AGCCATGTTTATATCAATGTGATCCTTCCGGTGCATATTTTGCATGGA 414 consensus_1803#1 TAATCTTTACACAATCAAGAATAAATTA----GATTCTTATAATA-AAATGTTTTGTTGA 320 ** * * * ** * ** ** * *** *** * * ** ** * ** consensus_1803#0 AGGCTACAGCAATGGGTAAAAATTT----TGT-CAATGGAAAAGT--ATTTCTGGAGAAA 467 consensus_1803#1 AAGTAACATTATTATTCCTTTACTTGTAATATATAATAAGAAAATTTATCTTTAAAATAC 380 * * *** * * * ** * * *** *** * ** * * * * consensus_1803#0 AGATATAGTGAAGATTTGGAATTGGACGATGCTG-TTCATACTGCC 512 consensus_1803#1 GAATTTTATCTTTATTCAGATTTCGTTTATAAAAATTTATTCAGA- 425 ** * * *** ** ** * ** ** ** * * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |