These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1847#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 500 fasta sequence [CGTTTACGTGGGCGCCCTCGCTGCTTTCGCTATGTTCTTCACCCTGCTAGAGGGACACTATACCACTGAGCAACAGAACATGTGTCAAATAATGGCCAGCCAGCAGAACTCTTTCCTATACACGGTTTCAAGATTAGTGTCTTCTCGAGACATTCGTCGACGAGGATCAGAGGAGGAGGGAGGTAGACTGCTTCATGTGACCGATCCTGACCCTACCGTGAAACCAAAACACATTCCAAAGCCTCCAATACTTGAGACGCTCTTCTACATTCATCTGATCGCCTTGTTCGCCATTCTGTCAATGTGTTGGATTGATACGTTACCAGGAATAGGCAGGGGATTGTCTCCAGTAGAGCTATACCATACCGTAGAGCATGGATTCACGTGCCATTTCAACAACAGCGAAGCTTGTTCGAATATTTCTACCCACGGTTGGATCTTCTTGATCGCTTACATAGTATTCTCGATTTCCGCGCTCAACTTTCTTTCAATGTGTGAGA] [+] EMBL BI506988 [CGTTTACGTGGGCGCCCTCGCTGCTTTCGCTATGTTCTTCACCCTGCTAGAGGGACACTATACCACTGAGCAACAGAACATGTGTCAAATAATGGCCAGCCAGCAGAACTCTTTCCTATACACGGTTTCAAGATTAGTGTCTTCTCGAGACATTCGTCGACGAGGATCAGAGGAGGAGGGAGGTAGACTGCTTCATGTGACCGATCCTGACCCTACCGTGAAACCAAAACACATTCCAAAGCCTCCAATACTTGAGACGCTCTTCTACATTCATCTGATCGCCTTGTTCGCCATTCTGTCAATGTGTTGGATTGATACGTTACCAGGAATAGGCAGGGGATTGTCTCCAGTAGAGCTATACCATACCGTAGAGCATGGATTCACGTGCCATTTCAACAACAGCGAAGCTTGTTCGAATATTTCTACCCACGGTTGGATCTTCTTGATCGCTTACATAGTATTCTCGATTTCCGCGCTCAACTTTCTTTCAATGTGTGAGA] consensusID : consensus_1847#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 498 fasta sequence [TTCTCTGCCTTCATCCTGGGCATTGTGTGCTTCATCTGGGGAAGAATATATCCACCACCGGCTCTGATACCAAACAGCTTGCGAATCAAAATACCCCGTTGCGCCCTTCTAAAAATTAGCCTGATCTACGCGTTCTCTGGTATAGTGATCACCCTTTCCATGGACCGGGACAGAGTTCTCTGCCACCTACAGGATCCCATAAAGGGCATCACGTTGGTCTTCTCCCTTGTCTATTACTTCTTCTTCTGTCGCAAAATGATGAGCTTGCAGAGGATCTTTTCAAGCACCACGATAATAGTGGGTCTTTTCATAAGCGTGGATTATGGCCTCTGCGATGAATTTCGATGCAGGGGGCGGGAGGTTTCAGCGCACGTCACAACTGTAAAGGGAAGTTGGGGTGTGAAAGCCATTTGGACGTTCGTTTACGTGGGCGCCCTCGCTGCTTTCGCTATGTTCTTCACCCTGCTAGAGGGACACTATACCACTGAGCAACAGAAC] [+] EMBL BI504841 [TTCTCTGCCTTCATCCTGGGCATTGTGTGCTTCATCTGGGGAAGAATATATCCACCACCGGCTCTGATACCAAACAGCTTGCGAATCAAAATACCCCGTTGCGCCCTTCTAAAAATTAGCCTGATCTACGCGTTCTCTGGTATAGTGATCACCCTTTCCATGGACCGGGACAGAGTTCTCTGCCACCTACAGGATCCCATAAAGGGCATCACGTTGGTCTTCTCCCTTGTCTATTACTTCTTCTTCTGTCGCAAAATGATGAGCTTGCAGAGGATCTTTTCAAGCACCACGATAATAGTGGGTCTTTTCATAAGCGTGGATTATGGCCTCTGCGATGAATTTCGATGCAGGGGGCGGGAGGTTTCAGCGCACGTCACAACTGTAAAGGGAAGTTGGGGTGTGAAAGCCATTTGGACGTTCGTTTACGTGGGCGCCCTCGCTGCTTTCGCTATGTTCTTCACCCTGCTAGAGGGACACTATACCACTGAGCAACAGAAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1847#0 CGTTTACGTGGGCGCCCTCGCTGCTTTCGCTATGTTCTTCACCCTGCTAGAGGGACACTA 60 consensus_1847#1 -------TTCTCTGCCTTCATCCTGGGCATTGTGTGCTTCATCT-----GGGGAAGAATA 48 * *** ** * * *** ***** * * ** * * ** consensus_1847#0 TACCACTGAGCAACAGAACATGTGTCAAATAATGGCCAGCCAGCAGAACTCTTTCCTATA 120 consensus_1847#1 TATCC---ACCACCGGCTCTGATACCAAACAGCTTGCGA--ATCAAAATACCCCGTTGCG 103 ** * * ** * * * * **** * * * ** ** * * consensus_1847#0 CACGGTTTCAAGATTAGTGTCTTCTCGAGACATTCGTCGACGAGGATCAGAG-----GAG 175 consensus_1847#1 CCCT-TCTAAAAATTAGCCTGATCTACGCGTTCTCTGGTATAGTGATCACCCTTTCCATG 162 * * * * ** ***** * *** ** * ***** * consensus_1847#0 GAGGGAGGTAGACTGCTTCATGTGACCGATCCTGACCCTACCGTGAAACCAAAACACATT 235 consensus_1847#1 GACCGGGACAGA--GTTCTCTGCCACCTA-CAGGATCCCAT----AAAGGGCATCACGTT 215 ** * * *** * * ** *** * * ** ** * *** * *** ** consensus_1847#0 CCAAAGCCTCCAATACTTGAGACGC--TCTTCTACATTCATCTGATCGCCTTGTTCGCCA 293 consensus_1847#1 G-GTCTTCTCCCTTGTCTATTACTTCTTCTTCTGTCGCAAAATGATGAGCTTGCAGAGGA 274 **** * * ** ****** * **** **** * consensus_1847#0 TTCTGTCAATGTGTTGGATTGATA-CGTTACCAGGAATAGGCAGGGGAT-TGTCTCCAGT 351 consensus_1847#1 TCTTTTCAA-GCACCACGATAATAGTGGGTCTTTTCATAAGCGTGGATTATGGCCTCTGC 333 * * **** * * *** * * *** ** ** * ** * * * consensus_1847#0 AGAGCTATACCATACCGTAGAGCATGGATTCACGTGC-CATTTCAACAACA--GCGAAGC 408 consensus_1847#1 GATGAATTTCGATGCAGGGGGCGGGAGGTTTCAGCGCACGTCACAACTGTAAAGGGAAGT 393 * * * ** * * * * ** * ** * * **** * * **** consensus_1847#0 TTG--TTCGAA---TATTTCTACCCACGGTTGGAT---CTTCTTGATCGCTTACATAGTA 460 consensus_1847#1 TGGGGTGTGAAAGCCATTTGGACGTTCGTTTACGTGGGCGCCCTCGCTGCTTTCGCTATG 453 * * * *** **** ** ** ** * * * * **** * * consensus_1847#0 TTCTCGATTTC-CGCGCTCAACTTTCTTTCAATGTGTGAGA---- 500 consensus_1847#1 TTCTTCACCCTGCTAGAGGGACACTATACCACTGAGCAACAGAAC 498 **** * * * ** * * ** ** * * * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |