These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1943#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 511 fasta sequence [CATGCACAACTCGAACATATCGAAGATACTCGTAGCTCGATGGAAAGCGATGTCGAATTCCGAGAAACAGCCGTACTACGAGGAGCAATCACGGCTGTCGAAGCTGCACATGGAGAAGCATCCCGACTACAGGTACAGGCCGCGGCCGAAACGCACCTGCATCGTGGACGGGAAGAAGATGCGCATATCCGAGTACAAGTCGTTGATGCGGCAACGGAGGCAGGAGATGAGGCAACTGTGGTGCCGTGACAGCGGGCCAGAGATGAGCTTCCTGTCCCCGGTCGGCTCTGAACTGGGCACGCAACACCATCCGGGGACCGGTGCCGGGCCGTCGGCGAGGCCTAGCGTGTCCCCTCCGGCGACCATGTTGAACGGAGGCGCGGCCGGCCCCAGTTCCGACCATCCGTCCTTCTATTATCCCCAGGACAGCCTTTCGCCGACGGATATGATGAACTTCTCGCCAGAGAACTCGGGATCGATCGGCGGTTACGACGCGAGCCCCCGCCACCAC] [+] EMBL BI504567 [CATGCACAACTCGAACATATCGAAGATACTCGTAGCTCGATGGAAAGCGATGTCGAATTCCGAGAAACAGCCGTACTACGAGGAGCAATCACGGCTGTCGAAGCTGCACATGGAGAAGCATCCCGACTACAGGTACAGGCCGCGGCCGAAACGCACCTGCATCGTGGACGGGAAGAAGATGCGCATATCCGAGTACAAGTCGTTGATGCGGCAACGGAGGCAGGAGATGAGGCAACTGTGGTGCCGTGACAGCGGGCCAGAGATGAGCTTCCTGTCCCCGGTCGGCTCTGAACTGGGCACGCAACACCATCCGGGGACCGGTGCCGGGCCGTCGGCGAGGCCTAGCGTGTCCCCTCCGGCGACCATGTTGAACGGAGGCGCGGCCGGCCCCAGTTCCGACCATCCGTCCTTCTATTATCCCCAGGACAGCCTTTCGCCGACGGATATGATGAACTTCTCGCCAGAGAACTCGGGATCGATCGGCGGTTACGACGCGAGCCCCCGCCACCAC] consensusID : consensus_1943#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 415 fasta sequence [TATGTCGCGCGAGGAGGCCGGAACAGGGGATGAAAGAAAGATGTGAAATCTCATATTCCGTCACACGCGATTTGCACCCGCTCGAGTCACAGGGATAGTGTGGCCACTTCGTTTCTTCGCGTCTCTGCATCGTGGACGGGAAGAAGATGCGCATATCCGAGTACAAGTCGTTGATGCGGCAACGGAGGCAGGAGATGAGGCAACTGTGGTGCCGTGACAGCGGGCCAGAGATGAGCTTCCTGTCCCCGGTCGGCTCTGAACTGGGCACGCAACACCATCCGGGGACCGGTGCCGGGCCGTCGGCGAGGCCTAGCGTGTCCCCTCCGGCGACCATGTTGAACGGAGGCGCGGCCGGCCCCAGTTCCGACCATCCGTCCTTCTATTACCCCCAGGACAGCCTTTCGCCGACGGATAT] [+] EMBL BI515699 [TATGTCGCGCGAGGAGGCCGGAACAGGGGATGAAAGAAAGATGTGAAATCTCATATTCCGTCACACGCGATTTGCACCCGCTCGAGTCACAGGGATAGTGTGGCCACTTCGTTTCTTCGCGTCTCTGCATCGTGGACGGGAAGAAGATGCGCATATCCGAGTACAAGTCGTTGATGCGGCAACGGAGGCAGGAGATGAGGCAACTGTGGTGCCGTGACAGCGGGCCAGAGATGAGCTTCCTGTCCCCGGTCGGCTCTGAACTGGGCACGCAACACCATCCGGGGACCGGTGCCGGGCCGTCGGCGAGGCCTAGCGTGTCCCCTCCGGCGACCATGTTGAACGGAGGCGCGGCCGGCCCCAGTTCCGACCATCCGTCCTTCTATTACCCCCAGGACAGCCTTTCGCCGACGGATAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1943#0 CATGCACAACTCGAACATATCGAAGATACTCGTAGCTCGATGGAAAGCGATGTCGAATTC 60 consensus_1943#1 ----------------------------TATGTCGCGCGAGGAGGCCGGAACAGGGGATG 32 ** ** *** * ** * * consensus_1943#0 CGAGAAACAGCCGTACTACGAGGAGCAATCACGGCTGTCGAAGCTGCACATGGAGAAGCA 120 consensus_1943#1 AAAGAAAGATGTGAAATCTCATATTCCGTCACACGCG----ATTTGCACCCGCTCGAGTC 88 ***** * * * * * * **** * * ***** * ** consensus_1943#0 TCCCGACTACAGGTACAGGCCGCGGCCGAAACGCACCTGCATCGTGGACGGGAAGAAGAT 180 consensus_1943#1 ACAGGGATAGTGTGGCCACTTCGTTTCTTCGCGTCTCTGCATCGTGGACGGGAAGAAGAT 148 * * ** * * * ** ************************ consensus_1943#0 GCGCATATCCGAGTACAAGTCGTTGATGCGGCAACGGAGGCAGGAGATGAGGCAACTGTG 240 consensus_1943#1 GCGCATATCCGAGTACAAGTCGTTGATGCGGCAACGGAGGCAGGAGATGAGGCAACTGTG 208 ************************************************************ consensus_1943#0 GTGCCGTGACAGCGGGCCAGAGATGAGCTTCCTGTCCCCGGTCGGCTCTGAACTGGGCAC 300 consensus_1943#1 GTGCCGTGACAGCGGGCCAGAGATGAGCTTCCTGTCCCCGGTCGGCTCTGAACTGGGCAC 268 ************************************************************ consensus_1943#0 GCAACACCATCCGGGGACCGGTGCCGGGCCGTCGGCGAGGCCTAGCGTGTCCCCTCCGGC 360 consensus_1943#1 GCAACACCATCCGGGGACCGGTGCCGGGCCGTCGGCGAGGCCTAGCGTGTCCCCTCCGGC 328 ************************************************************ consensus_1943#0 GACCATGTTGAACGGAGGCGCGGCCGGCCCCAGTTCCGACCATCCGTCCTTCTATTATCC 420 consensus_1943#1 GACCATGTTGAACGGAGGCGCGGCCGGCCCCAGTTCCGACCATCCGTCCTTCTATTACCC 388 ********************************************************* ** consensus_1943#0 CCAGGACAGCCTTTCGCCGACGGATATGATGAACTTCTCGCCAGAGAACTCGGGATCGAT 480 consensus_1943#1 CCAGGACAGCCTTTCGCCGACGGATAT--------------------------------- 415 *************************** consensus_1943#0 CGGCGGTTACGACGCGAGCCCCCGCCACCAC 511 consensus_1943#1 ------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |