These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1954#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence [CTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGGAAATATGCGTGGCAGAGGAAGAGGTCGTGGTGGTTTTAGAAATCAACCCGGTAACGCTGGTGCCAAACCCAAGAATACGCTGAAATTCGATAATGATTATGATTTTGAACAAGCTAATACTGAGTTCGAAGAATTAAGATCTCAATTAGCAAAAACAAAAATTGATTCTGGTGCTGATAATGAAAAGAAGGATGATAGTGGTAATGAAACTGGAGCAGGTGAAGGTGAACCAGAAGAAGAACCAGAGATAGTTCATTATGACAAATCAAAATCGTTCTTTGATAACATCAGTTGCGAAGCAGTGGAGAGAAGTAAAGGACGATTNNAACGTACAGACTGGAGGACAGAGCGCAAATTGAACTCTGAAACATTTGGTGTAGCGTCAACGAGACGCGGT] [+] EMBL BI504838 [CTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGGAAATATGCGTGGCAGAGGAAGAGGTCGTGGTGGTTTTAGAAATCAACCCGGTAACGCTGGTGCCAAACCCAAGAATACGCTGAAATTCGATAATGATTATGATTTTGAACAAGCTAATACTGAGTTCGAAGAATTAAGATCTCAATTAGCAAAAACAAAAATTGATTCTGGTGCTGATAATGAAAAGAAGGATGATAGTGGTAATGAAACTGGAGCAGGTGAAGGTGAACCAGAAGAAGAACCAGAGATAGTTCATTATGACAAATCAAAATCGTTCTTTGATAACATCAGTTGCGAAGCAGTGGAGAGAAGTAAAGGACGATTNNAACGTACAGACTGGAGGACAGAGCGCAAATTGAACTCTGAAACATTTGGTGTAGCGTCAACGAGACGCGGT] consensusID : consensus_1954#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 363 fasta sequence [CCAATCTCTGGAAGATGGTGTATTAGATCTCATTAGTGGAGGTTCACGATCAACAACTCCAACTTCATCTTTATTGACACGAAAAAGTCCAACTATGGATCAAAGTATTCAGGTAGGCCATCAACAACAACAACAACAACAGCAGAGTGGAAATGTTGGCAAGCTTGGTGAAAAGACGAATATAAGAACTATTCAACCTGCTCGACGTGATCACGATAGCCATAGTGGTAATAAAACAGGAGGTACTGTATCACAATATAATGTTGGAAAACGTGATACAATGAAACAAGATGGTCAACTTCAAGGTCAAGGTACTCATGCTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGG] [+] EMBL BI504524 [CCAATCTCTGGAAGATGGTGTATTAGATCTCATTAGTGGAGGTTCACGATCAACAACTCCAACTTCATCTTTATTGACACGAAAAAGTCCAACTATGGATCAAAGTATTCAGGTAGGCCATCAACAACAACAACAACAACAGCAGAGTGGAAATGTTGGCAAGCTTGGTGAAAAGACGAATATAAGAACTATTCAACCTGCTCGACGTGATCACGATAGCCATAGTGGTAATAAAACAGGAGGTACTGTATCACAATATAATGTTGGAAAACGTGATACAATGAAACAAGATGGTCAACTTCAAGGTCAAGGTACTCATGCTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1954#0 CTCAAGGTGGTCGTGGAAATCGTGGAGGATGGATGAATCGTGGAAATATGCGTGGCAGAG 60 consensus_1954#1 ---------------------------------CCAATCTCTGGAAGATG-GTGTATTAG 26 **** * ** *** *** ** consensus_1954#0 GAAGAGGTCGTGGTGGTTTTAGAAATCAACCCGGTAACGCTGGTGCCAAACCCAAGAATA 120 consensus_1954#1 ATCTCATTAGTGGAGGTTCACGA--TCAAC-----AACTCCAACTTCATCTTTATTGACA 79 * **** **** ** ***** *** * ** * * * consensus_1954#0 CGCTGAAATTCGATAATGATTATGATTTTGAACAAGCTAATACTGAGTTCGAAGAATTAA 180 consensus_1954#1 CGAAAAAGTCCAACTATG-----------GATCAA---AGTATTCAGGTAGGCCA-TCAA 124 ** ** * * * *** ** *** * ** * ** * * * * ** consensus_1954#0 GATCTCAATTAGCAAAAACAAAA-ATTGATTCTGGTGCTGATAATGAAAAGAAGGATGAT 239 consensus_1954#1 CAACAACAACAACAACAGCAGAGTGGAAATGTTGGCAAGCTTGGTGAAAAGACGAATATA 184 * * * * *** * ** * ** *** * ******** * ** consensus_1954#0 AGTGGTAATGAAACTGGAGCAGGTGAAGGTGA--ACCAGAAGAAGAACCAGAGATAGTTC 297 consensus_1954#1 AGAACTATTCAACCTGCTCGACGTGATCACGATAGCCATAGTGGTAATAAAACAGGAGGT 244 ** ** * ** *** * **** ** *** * ** * * * consensus_1954#0 ATTATGACAAATCAAAATCGTTCTTTGATAACATCAGTTGCGAAGCAGTGGAGAGAAGTA 357 consensus_1954#1 ACTGTATCACAATATAATG----TTGGAAAACGT-------GATACAATGAAACAAGAT- 292 * * * ** * * *** ** ** *** * ** ** ** * * * consensus_1954#0 AAGGACGATTNNAACGTACAGACTGGAGGACAGAGCGCAAATTGAACTCTGAAACATTTG 417 consensus_1954#1 --GGTCAACTTCAAGGTCAAGGT-----ACTCATGCTCAAGGTGGTCGTGGAAA----TC 341 ** * * * ** ** ** ** *** ** * **** * consensus_1954#0 GTGTAGCGTCAACGAGACGCGGT 440 consensus_1954#1 GTGGAGGATGGATGAATCGTGG- 363 *** ** * * ** ** ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |