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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1963#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 592 fasta sequence
[ATCCAAAATGTCAAATATCTCAACCAGCTTCTCAATTAAGAGAAGAACTACATCTCAAAGCAGCAGATCAAGATGATAATATATCAAGTGATGACAGTGGTAGTGAACAAGAACCAATGGAAGTGGATGAATTAGATATGAAAAAGGATAAGAAATCAGAAAATAGATCAAGACATAAATCAGCAGATATTAAAAGAAATCAAAGGTTAGAAAGATCCGAGAGTAAAGAAAAAAAAGACAGGACTTTGGATCCTATGGATCCAGCATCATATAGTGATATTCCACGAGGAAAATGGTCTGATGGTTTAGCAAGACACAATGAAGCTAAAACAGGAGCAGATACAACTGCTTCAGGACCACTTTATCAAATGAGACCATATCCTAGTCCAGGTGCAGTTCTTCGATCAAATAGAGCTAATAAAACAGAATCAGAATCATCTAATAAACCTAAAGTATCATGTCCTGAAAAACCAGAATAAATATTTTTGTTTTTATATTTTCATTATACTTATTGTGAACATTTATTGTAAATATATCATAATAAATAAAAAATTCATGGATAATTTTATTATTTTTAAAAAACAAAAAAAAA]
[+] EMBL BI505636 [ATCCAAAATGTCAAATATCTCAACCAGCTTCTCAATTAAGAGAAGAACTACATCTCAAAGCAGCAGATCAAGATGATAATATATCAAGTGATGACAGTGGTAGTGAACAAGAACCAATGGAAGTGGATGAATTAGATATGAAAAAGGATAAGAAATCAGAAAATAGATCAAGACATAAATCAGCAGATATTAAAAGAAATCAAAGGTTAGAAAGATCCGAGAGTAAAGAAAAAAAAGACAGGACTTTGGATCCTATGGATCCAGCATCATATAGTGATATTCCACGAGGAAAATGGTCTGATGGTTTAGCAAGACACAATGAAGCTAAAACAGGAGCAGATACAACTGCTTCAGGACCACTTTATCAAATGAGACCATATCCTAGTCCAGGTGCAGTTCTTCGATCAAATAGAGCTAATAAAACAGAATCAGAATCATCTAATAAACCTAAAGTATCATGTCCTGAAAAACCAGAATAAATATTTTTGTTTTTATATTTTCATTATACTTATTGTGAACATTTATTGTAAATATATCATAATAAATAAAAAATTCATGGATAATTTTATTATTTTTAAAAAACAAAAAAAAA]
consensusID : consensus_1963#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 270 fasta sequence
[TTTTTTTTTTTATTTAAGCATAAAACATTGAATTTAAAATTTTCTTTTTTTATAGAGGAAAATGGTCTGATGGTTTAGCAAGACACAATGAAGCTAAAACAGGAGCAGATACAACTGCTTCAGGACCACTTTATCAAATGAGACCATATCCTAGTCCAGGTGCAGTTCTTCGATCAAATAGAGCTAATAAAACAGAATCAGAATCATCTAATAAACCTAAAGTATCATGTCCTGAAAAACCAGAATAAATATTTTTGTTTTTATATTTTC]
[-] EMBL BI504491 [TTTTTTTTTTTATTTAAGCATAAAACATTGAATTTAAAATTTTCTTTTTTTATAGAGGAAAATGGTCTGATGGTTTAGCAAGACACAATGAAGCTAAAACAGGAGCAGATACAACTGCTTCAGGACCACTTTATCAAATGAGACCATATCCTAGTCCAGGTGCAGTTCTTCGATCAAATAGAGCTAATAAAACAGAATCAGAATCATCTAATAAACCTAAAGTATCATGTCCTGAAAAACCAGAATAAATATTTTTGTTTTTATATTTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1963#0 ATCCAAAATGTCAAATATCTCAACCAGCTTCTCAATTAAGAGAAGAACTACATCTCAAAG 60
consensus_1963#1 ------------------------------------------------------------
consensus_1963#0 CAGCAGATCAAGATGATAATATATCAAGTGATGACAGTGGTAGTGAACAAGAACCAATGG 120
consensus_1963#1 ------------------------------------------------------------
consensus_1963#0 AAGTGGATGAATTAGATATGAAAAAGGATAAGAAATCAGAAAATAGATCAAGACATAAAT 180
consensus_1963#1 ------------------------------------------------------------
consensus_1963#0 CAGCAGATATTAAAAGAAATCAAAGGTTAGAAAGATCCGAGAGTAAAGAAAAAAAAGACA 240
consensus_1963#1 ----------------------------------------------------TTTTTTTT 8
consensus_1963#0 GGACTTTGGATCCTATGGATCCAGCATCATATAGTGATATTCCAC-GAGGAAAATGGTCT 299
consensus_1963#1 TTTATTTAAGCATAAAACATTGAATTTAAAATTTTCTTTTTTTATAGAGGAAAATGGTCT 68
*** * ** * * * ** * * ** * **************
consensus_1963#0 GATGGTTTAGCAAGACACAATGAAGCTAAAACAGGAGCAGATACAACTGCTTCAGGACCA 359
consensus_1963#1 GATGGTTTAGCAAGACACAATGAAGCTAAAACAGGAGCAGATACAACTGCTTCAGGACCA 128
************************************************************
consensus_1963#0 CTTTATCAAATGAGACCATATCCTAGTCCAGGTGCAGTTCTTCGATCAAATAGAGCTAAT 419
consensus_1963#1 CTTTATCAAATGAGACCATATCCTAGTCCAGGTGCAGTTCTTCGATCAAATAGAGCTAAT 188
************************************************************
consensus_1963#0 AAAACAGAATCAGAATCATCTAATAAACCTAAAGTATCATGTCCTGAAAAACCAGAATAA 479
consensus_1963#1 AAAACAGAATCAGAATCATCTAATAAACCTAAAGTATCATGTCCTGAAAAACCAGAATAA 248
************************************************************
consensus_1963#0 ATATTTTTGTTTTTATATTTTCATTATACTTATTGTGAACATTTATTGTAAATATATCAT 539
consensus_1963#1 ATATTTTTGTTTTTATATTTTC-------------------------------------- 270
**********************
consensus_1963#0 AATAAATAAAAAATTCATGGATAATTTTATTATTTTTAAAAAACAAAAAAAAA 592
consensus_1963#1 -----------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |