These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1973#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 483 fasta sequence [AACAGCAGCGGTGACCTTGCCGGCGACATTCCGCCCGCCAGATATTCCAACGAAGGCACCTCGAGCAGGCTCAATTACACCCCCTCGTCCGACCAGGATTACGGGACGCTGGCCTGTTGGGCGAGTAACGCGGTTGGCCCCTCCAAACAGCCCTGCCTCTACCAAGTGATCGCAGCAGGCAGGCCGTACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGGATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGACAAGCAACGGTTAGAATCGTCGAACCCNNNTGGGAGTTGGAGCTTCGGAAACCGGCAACTGTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTANNNTGGAAGGGGAAGCGTTAAAAGGAGTGGCCAAGTTCACCGGGGAATCGGGATCCTCGGTGGACATGTCACCGATCC] [+] EMBL BI510036 [AACAGCAGCGGTGACCTTGCCGGCGACATTCCGCCCGCCAGATATTCCAACGAAGGCACCTCGAGCAGGCTCAATTACACCCCCTCGTCCGACCAGGATTACGGGACGCTGGCCTGTTGGGCGAGTAACGCGGTTGGCCCCTCCAAACAGCCCTGCCTCTACCAAGTGATCGCAGCAGGCAGGCCGTACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGGATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGACAAGCAACGGTTAGAATCGTCGAACCCNNNTGGGAGTTGGAGCTTCGGAAACCGGCAACTGTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTANNNTGGAAGGGGAAGCGTTAAAAGGAGTGGCCAAGTTCACCGGGGAATCGGGATCCTCGGTGGACATGTCACCGATCC] consensusID : consensus_1973#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 475 fasta sequence [ACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGGATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGACAAGCAACGGTTAGAATCGTCGAACCCGTACTGGGAGTTGGAGCTTCGGAAACCGGCAACTGTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTATCATGGAAGGGGAAGCGTTAAAAGGAGTGGACATGTCACCGATCCTGATCGGGCTGGGCGGAACCGCGACTGGATTAGGCTTGATCGTGACAGGTGTATTGATGGCGCTTTGGAGGAAACACGCGGCAACCCCGGCGAAAGCGAAATCGCCCCCCCAACAGCCGAGCATCGCGACATTCGCCGGGAAGGGCGAGGAGGAAGACGGGAATCCTGATCTAATACCCACCACAGCCTTGACCAATCACCTCACAGATAG] [+] EMBL BI511478 [ACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGGATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGACAAGCAACGGTTAGAATCGTCGAACCCGTACTGGGAGTTGGAGCTTCGGAAACCGGCAACTGTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTATCATGGAAGGGGAAGCGTTAAAAGGAGTGGACATGTCACCGATCCTGATCGGGCTGGGCGGAACCGCGACTGGATTAGGCTTGATCGTGACAGGTGTATTGATGGCGCTTTGGAGGAAACACGCGGCAACCCCGGCGAAAGCGAAATCGCCCCCCCAACAGCCGAGCATCGCGACATTCGCCGGGAAGGGCGAGGAGGAAGACGGGAATCCTGATCTAATACCCACCACAGCCTTGACCAATCACCTCACAGATAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1973#0 AACAGCAGCGGTGACCTTGCCGGCGACATTCCGCCCGCCAGATATTCCAACGAAGGCACC 60 consensus_1973#1 ------------------------------------------------------------ consensus_1973#0 TCGAGCAGGCTCAATTACACCCCCTCGTCCGACCAGGATTACGGGACGCTGGCCTGTTGG 120 consensus_1973#1 ------------------------------------------------------------ consensus_1973#0 GCGAGTAACGCGGTTGGCCCCTCCAAACAGCCCTGCCTCTACCAAGTGATCGCAGCAGGC 180 consensus_1973#1 ------------------------------------------------------------ consensus_1973#0 AGGCCGTACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGG 240 consensus_1973#1 -------ACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGG 53 ***************************************************** consensus_1973#0 ATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGAC 300 consensus_1973#1 ATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGAC 113 ************************************************************ consensus_1973#0 AAGCAACGGTTAGAATCGTCGAACCCNNN-TGGGAGTTGGAGCTTCGGAAACCGGCAACT 359 consensus_1973#1 AAGCAACGGTTAGAATCGTCGAACCCGTACTGGGAGTTGGAGCTTCGGAAACCGGCAACT 173 ************************** ****************************** consensus_1973#0 GTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTANNNTGGAAGGGGAA 419 consensus_1973#1 GTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTATCATGGAAGGGGAA 233 ********************************************** *********** consensus_1973#0 GCGTTAAAAGGAGTGGCCAAGTTCACCGGGG--AATCGGGATCCTCGGTGGACATGTCAC 477 consensus_1973#1 GCGTTAAAAGGAGTGGACATGT-CACCGATCCTGATCGGG---CTGGGCGGAACCGCGAC 289 **************** ** ** ***** ****** ** ** *** * ** consensus_1973#0 CGATCC------------------------------------------------------ 483 consensus_1973#1 TGGATTAGGCTTGATCGTGACAGGTGTATTGATGGCGCTTTGGAGGAAACACGCGGCAAC 349 * consensus_1973#0 ------------------------------------------------------------ consensus_1973#1 CCCGGCGAAAGCGAAATCGCCCCCCCAACAGCCGAGCATCGCGACATTCGCCGGGAAGGG 409 consensus_1973#0 ------------------------------------------------------------ consensus_1973#1 CGAGGAGGAAGACGGGAATCCTGATCTAATACCCACCACAGCCTTGACCAATCACCTCAC 469 consensus_1973#0 ------ consensus_1973#1 AGATAG 475 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |