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Apis mellifera
cluster # 20 cluster # 20       Sequences # 15       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_20#0 length = 990 sequences # 12  
consensus_20#1 length = 663 sequences # 2  
consensus_20#2 length = 524 sequences # 1  

consensusID : consensus_20#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 990
fasta sequence
                              [TTTTCTTTCTACATTTTTACAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTTTCCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGAGACGGGGTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCGTCCACCGCCGTGGTCTGGCCGTGGCCGGCTTTGGCCGGCTGATCCTGGAGCTCGAGCCAGCGGCCGACGAGGGGCGGGGGCGGCGGCCTGTAGGGGGGCGGCCTCCACTCGGCCACCGTGCTGCCGCTCCTCGAGCTCTGGTTCTGCTGCGACGTGTTCTTGCTGCCGAAGCCCGAGCTGCTCGACCTGCTCTCGGGCGAGGTCTCGAGGTCGGGCGAGGCGGCCAACTCGGGGGCGGACCTCGCGTGCCTCGCGTGCCTCGGCGGCAGCCTCGCCCTCGACCTGCCCGCCGGCTGGGGCGGCGAGGAGGTGGCCAGCGGCTGGACCGGCACGAACCGCCTCGACTCGGCGTGTATCGCCTTGAGGGAGGGCAGCTCCTGGCTGTAGCGCTGGTGCACGCTGCGCAGCTGCAGGTAGTCGGGCGGCGTCGGGAACGACCGCTCCCCGCCCGAGGACGGCTGCCTGACCGAGCTCAGGTCGCTGAAGTACAGCGGCGTCCACGGCACCTGGGGCCCGCTCGGCGAGCTCGCCAGAAA]

[+] EMBL BI512047             [TTTTCTTTCTACATTTTTACAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTTTCCTACACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGCGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI511432             [                 TACAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTTTCCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BI510906             [                 TACAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTTTCCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCNNNCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGAGACGGGGTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI511745             [                   CAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTTTCCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTCCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI514433             [                                       GATAGAATTGACTTGAAGTTTTCCTACACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGAGACGGGGTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCGTCCACCGCCGTGGTCTGGCCGTGGCCGGCTTTGGCCGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI515916             [                                       GATAGAATTGACTTGAAGTTTTCCTACACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGNTCGGGGTGGAGGCGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI516082             [                                                 ACTTGAAGTTTTCCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGC TTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGAGACGGGGTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCGTCCACCGCCGTGGTCTGGCCGTGGCCGGCTTTGGCCGGCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BI513588             [                                                 ACTTGAAGTTTTCCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTCCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGAGACGGGGTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCGTCCACCGCCGTGGTCTGGCCGTGGCCGGCTTTGGCCGGCTGATCCTGGAGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI515760             [                                                             CCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGC TTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGNNACGGGGTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI516381             [                                                                     GGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCCGTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCTGGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCTCGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGATGTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGAGACGGGGTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCGTCCACCGCCGTGGTCTGGCCGTGGCCGGCTTTGGCCGGCTGATCCTGAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL BI513651             [                                                                                                                                                                                                                                                                                                                         TACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGGCGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGAGACGGGGTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCGTCCACCGCCGTGGTCTGGCCGTGGCCGGCTTTGGCCGGCTGATCCTGGAGCTCGAGCCAGCGGCCGACGAGGGGCGGGGGCGGCGGCCTGTAGGGGGGCGGCCTCCACTCGGCCACCGTGCTGCCGCTCCTCGAGCTCTGGTTCTGCTGCGACGTGTTCTTGCTGCCGAAGCCCGAGCTGCTCGACCTGCTCTCGGGCGAGGTCTCGAGGTCGGGCGAGGCGGCCAACTCGGGGGCGGACCTCGCGTGCCTCGCGTGCCTCGGC                                                                                                                                                                                                                                                                                ]
[-] EMBL BI513798             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCTGCCGCTCCTCGAGCTCTGGTTCTGCTGCGACGTGTTCTTGCTGCCGAAGCCCGAGCTGCTCGACCTGCTCTCGGGCGAGGTCTCGAGGTCGGGCGAGGCGGCCAACTCGGGGGCGGACCTCGCGTGCCTCGCGTGCCTCGGCGGCAGCCTCGCCCTCGACCTGCCCGCCGGCTGGGGCGGCGAGGAGGTGGCCAGCGGCTGGACCGGCACGAACCGCCTCGACTCGGCGTGTATCGCCTTGAGGGAGGGCAGCTCCTGGCTGTAGCGCTGGTGCACGCTGCGCAGCTGCAGGTAGTCGGGCGGCGTCGGGAACGACCGCTCCCCGCCCGAGGACGGCTGCCTGACCGAGCTCAGGTCGCTGAAGTACAGCGGCGTCCACGGCACCTGGGGCCCGCTCGGCGAGCTCGCCAGAAA]


>consensus_20#0 TTTTCTTTCTACATTTTTACAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTT TCCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCC GTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCT GGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCT CGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGAT GTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGG CGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGGAGGTGGGGGTGGGCGTGCAGGAGACGGG GTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCGTCCACCGCCGTGGTCTGGCCGTGGCC GGCTTTGGCCGGCTGATCCTGGAGCTCGAGCCAGCGGCCGACGAGGGGCGGGGGCGGCGG CCTGTAGGGGGGCGGCCTCCACTCGGCCACCGTGCTGCCGCTCCTCGAGCTCTGGTTCTG CTGCGACGTGTTCTTGCTGCCGAAGCCCGAGCTGCTCGACCTGCTCTCGGGCGAGGTCTC GAGGTCGGGCGAGGCGGCCAACTCGGGGGCGGACCTCGCGTGCCTCGCGTGCCTCGGCGG CAGCCTCGCCCTCGACCTGCCCGCCGGCTGGGGCGGCGAGGAGGTGGCCAGCGGCTGGAC CGGCACGAACCGCCTCGACTCGGCGTGTATCGCCTTGAGGGAGGGCAGCTCCTGGCTGTA GCGCTGGTGCACGCTGCGCAGCTGCAGGTAGTCGGGCGGCGTCGGGAACGACCGCTCCCC GCCCGAGGACGGCTGCCTGACCGAGCTCAGGTCGCTGAAGTACAGCGGCGTCCACGGCAC CTGGGGCCCGCTCGGCGAGCTCGCCAGAAA



consensusID : consensus_20#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 663
fasta sequence
                              [TACGTGTCGTTTTTTTAAAAGGTATAGTATCGGAGCATGGTACAGATTCTTTGGAGCATCGTGCCATCTCTCGTTTCTTTTTTTTTTTTTCTTTTTTTCTTNNNTCAACGTTCCTCCTCTAAAGTAAAACCTCCTCACGCGTATTCAATATTTTGCCGATCGTATGCCGCGCAGTCTGTCGGTCGGAATAATAATTTCAGTGCTTGGAAAACTTTCATTTCCTCGCATTCCCCGACTCTCTATTAATATTTAGTAACGCTAAAAATCGCGGTCCTTCGAATTGGACGTAGGCG-CG--GGTACCACGCGGGATATGACCAATAATAAATGATCGTCGAATTCGAATCGTCTCTCGC--CCTCTTCTTTTCCTCTTCCTTCTTCATTCTCCTTCTCCTTCTGCTGTGCTTCTTCCTTCGAACGTAAGAGAGGAAGGAAGTTGGGAGAAAGACTGGCTGGCTGGTCTCCTCTCGGATTAACAACGATCGAACTCGAACGATAGACAGGTTCTTAACAAAACGCATTCGTTCTACTACGTTTTTGTCGTTCGTTCATCGATGAAAATTTAATAATGTCCTGAGCTGATGTTTGTCGTTAACAGCCTATTCTCGTTTTCGATATTAGTCGCGTCTCAACATCAGCAGCCACAGCAGACGAATACTCAGCGTC]

[-] EMBL BI509624             [TACGTGTCGTTTTTTTAAAAGGTATAGTATCGGAGCATGGTACAGATTCTTTGGAGCATCGTGCCATCTCTCGTTTCTTTTTTTTTTTTTCTTTTTTTCTTNNNTCAACGTTCCTCCTCTAAAGTAAAACCTCCTCACGCGTATTCAATATTTTGCCGATCGTATGCCGCGCAGTCTGTCGGTCGGAATAATAATTTCAGTGCTTGGAAAACTTTCATTTCCTCGCATTCCCCGACTCTCTATTAATATTTAGTAACGCTAAAAATCGCGGTCCTTCGAATTGGACGTAGGCGTCGTTGGTACCACGCGGGATATGACCAATAATAAATGATCGTCGAATTCGAATCGTCTCTCGCTTCCTCTTCTTTTCCTCTTCCTTCTT ATTCTCCTTCTTCTTCTGTTATGCTTCTTCCTTCGAACGTAAGAGAGGAAGGAAGTTGGGAGAAAGACTGGCTCGCTGGT                                                                                                                                                                                                             ]
[+] EMBL BI504822             [                                                                                                                                                                             GTCTGTCGGTCGGAATAATAATTTCAGTGCTTGGAAAACTTTCATTTCCTCGCATTCCCCGACTCTCTATTAATATTTAGTAACGCTAAAAATCGCGGTCCTTCGAATTGGACGTAGG   C    GTACCACGCGGGATATGACCAATAATAAATGATCGTCGAATTCGAATCGTCTCT      CTCTTCTTTTCCTCTTCCTTTTTCCTTCTCCTTCTCCTTCTGCTGTGCTTCTTCCTTCGAACGTAAGAGAGGAAGGAAGTTGGGAGAAAGACTGGCTGGCTGGTCTCCTCTCGGATTAACAACGATCGAACTCGAACGATAGACAGGTTCTTAACAAAACGCATTCGTTCTACTACGTTTTTGTCGTTCGTTCATCGATGAAAATTTAATAATGTCCTGAGCTGATGTTTGTCGTTAACAGCCTATTCTCGTTTTCGATATTAGTCGCGTCTCAACATCAGCAGCCACAGCAGACGAATACTCAGCGTC]


>consensus_20#1 TACGTGTCGTTTTTTTAAAAGGTATAGTATCGGAGCATGGTACAGATTCTTTGGAGCATC GTGCCATCTCTCGTTTCTTTTTTTTTTTTTCTTTTTTTCTTNNNTCAACGTTCCTCCTCT AAAGTAAAACCTCCTCACGCGTATTCAATATTTTGCCGATCGTATGCCGCGCAGTCTGTC GGTCGGAATAATAATTTCAGTGCTTGGAAAACTTTCATTTCCTCGCATTCCCCGACTCTC TATTAATATTTAGTAACGCTAAAAATCGCGGTCCTTCGAATTGGACGTAGGCGCGGGTAC CACGCGGGATATGACCAATAATAAATGATCGTCGAATTCGAATCGTCTCTCGCCCTCTTC TTTTCCTCTTCCTTCTTCATTCTCCTTCTCCTTCTGCTGTGCTTCTTCCTTCGAACGTAA GAGAGGAAGGAAGTTGGGAGAAAGACTGGCTGGCTGGTCTCCTCTCGGATTAACAACGAT CGAACTCGAACGATAGACAGGTTCTTAACAAAACGCATTCGTTCTACTACGTTTTTGTCG TTCGTTCATCGATGAAAATTTAATAATGTCCTGAGCTGATGTTTGTCGTTAACAGCCTAT TCTCGTTTTCGATATTAGTCGCGTCTCAACATCAGCAGCCACAGCAGACGAATACTCAGC GTC



consensusID : consensus_20#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 524
fasta sequence
                              [GTCTGTCGGTCGGAATAATAATTTCAGNNCTTGGAAAACTTTCATTTCCTCGCATTCCCCGACTCTCTATTAATATTTAGTAACGCTAAAAATCGCGGTCCTTCGAATTGGACGTAGGCGTACCACGCGGGATATGACCAATAATAAATGATCGTCGAATTCGAATCGTCTCTCTCTTCTTTTCCTCTTCCTTTTTCCTTCTCCTTCTCCTTCTGCTGTGCTTCTTCCTTCGAACGTAAGAGAGGAAGGAAGTTGGGAGAAAGACTGGCTGGCTGGTCTCCTCTCGGATTAACAACGATCGAACTCGAACGATAGACAGGTTCTTAACAAAACGCATTCGTTCTACTACGTTTTTGTCGTTCGTTCATCGATGAAAATTTAATAATGTCCTGAGCTGATGTTTGTCGTTAACAGCCTTTTCTCTTTTTTTTTTCGATTTTTTTTTNNNTCTTTTCTTTCTACATTTTTACAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTTTCCTACACTGGAAT]

[+] EMBL BI517163             [GTCTGTCGGTCGGAATAATAATTTCAGNNCTTGGAAAACTTTCATTTCCTCGCATTCCCCGACTCTCTATTAATATTTAGTAACGCTAAAAATCGCGGTCCTTCGAATTGGACGTAGGCGTACCACGCGGGATATGACCAATAATAAATGATCGTCGAATTCGAATCGTCTCTCTCTTCTTTTCCTCTTCCTTTTTCCTTCTCCTTCTCCTTCTGCTGTGCTTCTTCCTTCGAACGTAAGAGAGGAAGGAAGTTGGGAGAAAGACTGGCTGGCTGGTCTCCTCTCGGATTAACAACGATCGAACTCGAACGATAGACAGGTTCTTAACAAAACGCATTCGTTCTACTACGTTTTTGTCGTTCGTTCATCGATGAAAATTTAATAATGTCCTGAGCTGATGTTTGTCGTTAACAGCCTTTTCTCTTTTTTTTTTCGATTTTTTTTTNNNTCTTTTCTTTCTACATTTTTACAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTTTCCTACACTGGAAT]


>consensus_20#2 GTCTGTCGGTCGGAATAATAATTTCAGNNCTTGGAAAACTTTCATTTCCTCGCATTCCCC GACTCTCTATTAATATTTAGTAACGCTAAAAATCGCGGTCCTTCGAATTGGACGTAGGCG TACCACGCGGGATATGACCAATAATAAATGATCGTCGAATTCGAATCGTCTCTCTCTTCT TTTCCTCTTCCTTTTTCCTTCTCCTTCTCCTTCTGCTGTGCTTCTTCCTTCGAACGTAAG AGAGGAAGGAAGTTGGGAGAAAGACTGGCTGGCTGGTCTCCTCTCGGATTAACAACGATC GAACTCGAACGATAGACAGGTTCTTAACAAAACGCATTCGTTCTACTACGTTTTTGTCGT TCGTTCATCGATGAAAATTTAATAATGTCCTGAGCTGATGTTTGTCGTTAACAGCCTTTT CTCTTTTTTTTTTCGATTTTTTTTTNNNTCTTTTCTTTCTACATTTTTACAGAGATGATT TGCCCAGCTGATAGAATTGACTTGAAGTTTTCCTACACTGGAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_20#1      ------------------------------------------------------------
consensus_20#2      ------------------------------------------------------------
consensus_20#0      TTTTCTTTCTACATTTTTACAGAGATGATTTGCCCAGCTGATAGAATTGACTTGAAGTTT 60
                                                                                

consensus_20#1      -----------------------TACGTGTCGTTTTTTTAAAAGGTATAGTATCGGAGCA 37
consensus_20#2      ------------------------------------------------------------
consensus_20#0      TCCTATACTGGAATCGCGTGCGATGATCCTCGTTGTGCTTTTTTCTAACGGTTGGTCTCC 120
                                                                                

consensus_20#1      TGGTACAGATTCTTTGGAGCATCGTGCCATCTCTCGTTTCTTTTTTTTTTTTTCTTTTTT 97
consensus_20#2      ------------------------------------------------------------
consensus_20#0      GTGAACGAATACGAATTCTCGTCACAGCCGGGATCCCATTCGATGATGCGACGTGTATCT 180
                                                                                

consensus_20#1      TCTTNNNTCAACGTTCCTCCTCTAAAGTAAAACCTCCTCACGCGTATTCAATATTTTGCC 157
consensus_20#2      ------------------------------------------------------------
consensus_20#0      GGAACAGTGCTCTTCTCTCGTTCAACAAGCGCTCTCCAAATGAGCGCTCTGCCTTCTCCT 240
                                                                                

consensus_20#1      GATCGTATGCCGCGCAGTCTGTCGG---TCGGAATA-ATAATTTCAGTGCTTGGAAAACT 213
consensus_20#2      ----------------GTCTGTCGG---TCGGAATA-ATAATTTCAGNNCTTGGAAAACT 40
consensus_20#0      CGCTTGCCGCTGTCGAAATTGATGGAACTCGGCCTTCATCGCTTGCACCCTCGCCTCGAT 300
                                       **  **   ****  *  **   **     ** *      *

consensus_20#1      TTCATTTCCTC-GCATTCCC-CGACTCTCTATTAATATT-TAGTAACGCTAAAAATCG-- 268
consensus_20#2      TTCATTTCCTC-GCATTCCC-CGACTCTCTATTAATATT-TAGTAACGCTAAAAATCG-- 95
consensus_20#0      GTTGTCCCTGCTGTACCTCGGCGGCTGGTGATGAAGCTGGTGGTGGATCTGGTGGACGGG 360
                     *  *  *  * * *   *  ** **    ** **  *  * **    **      **  

consensus_20#1      CGGTCCTTCGAATTGGACGTAGGCGCGGGTACCACGCGGGATATGACCAATAATAAATGA 328
consensus_20#2      CGGTCCTTCGAATTGGACGTAGGCG----TACCACGCGGGATATGACCAATAATAAATGA 151
consensus_20#0      CGGCCTCTCCTCCCTGGTCGGGGTGGAGGCGG-AGGTGGGGGTGGGCGTGCAGGAGACGG 419
                    *** *  **      *     ** *        * * ***    * *    *  * * * 

consensus_20#1      TCGTCGAATTCG-AATCGTCTCTCGCCCTCTTCTTTTCCTCTTCCTTCTTCATTCTCCTT 387
consensus_20#2      TCGTCGAATTCG-AATCGTCTCTC----TCTTCTTTTCCTCTTCCTTTTTCCTTCTCCTT 206
consensus_20#0      G-GTCGAACTCGTAGTGGCCGTCCACGCTGCCGGCGTCCACCGCCGTGGTCTGGCCGTGG 478
                      ****** *** * * * *   *    *       *** *  ** *  **   *     

consensus_20#1      CTCCTTCTGCTGTGCTTCTTCC----TTCGAACGTAAGAGAGGAAGGAAGTTGGGAGAAA 443
consensus_20#2      CTCCTTCTGCTGTGCTTCTTCC----TTCGAACGTAAGAGAGGAAGGAAGTTGGGAGAAA 262
consensus_20#0      CCGGCTTTGGCCGGCTGATCCTGGAGCTCGAGCCAGCGGCCGACGAGGGGCGGGGGCGGC 538
                    *    * **    ***  * *      **** *    *   *    *  *  ***     

consensus_20#1      GACTGGCTGGCTGGTCTCCTCTCGGATTAACAACGATCGAACTCGAACGATAGACAGGTT 503
consensus_20#2      GACTGGCTGGCTGGTCTCCTCTCGGATTAACAACGATCGAACTCGAACGATAGACAGGTT 322
consensus_20#0      GGCCTGTAGGGGGGCGGCCTCC--ACTCGGCCACCGTGCTGCCGCTCCTCGAGCTCTGGT 596
                    * *  *  **  **   ****     *   * **  *    *     *   **    * *

consensus_20#1      CTTAACAAAACGCATTCGTTCTACT-ACGTTTTTGTCGTTCG-----TTCATCGATGAAA 557
consensus_20#2      CTTAACAAAACGCATTCGTTCTACT-ACGTTTTTGTCGTTCG-----TTCATCGATGAAA 376
consensus_20#0      TCTGCTGCGACGTGTTCTTGCTGCCGAAGCCCGAGCTGCTCGACCTGCTCTCGGGCGAGG 656
                      *      ***  *** * ** *  * *     *  * ***      **   *  **  

consensus_20#1      ATTTAATAATGTCCTGAGCTGATG-TTTGTCGTTAACAGCCTATTCTCGTTTT-----CG 611
consensus_20#2      ATTTAATAATGTCCTGAGCTGATG-TTTGTCGTTAACAGCCTTTTCTCTTTTTTTTTTCG 435
consensus_20#0      TCTCGAGGTCGGGCGAGGCGGCCAACTCGGGGGCGGACCTCGCGTGCCTCGCGTGCCTCG 716
                      *  *    *  *   ** *     * *  *        *   *  *          **

consensus_20#1      ATATTAGTC-GCGTCTCAACAT--CAGC--AGCCACA-GCAGACGAAT-ACTCAGCGTC- 663
consensus_20#2      ATTTTTTTTTNNNTCTTTTCTTT-CTAC--ATTTTTACAGAGATGATTTGCCCAGCTGAT 492
consensus_20#0      GCGGCAGCCTCGCCCTCGACCTGCCCGCCGGCTGGGGCGGCGAGGAGGTGGCCAGCGGCT 776
                                  **   * *  *  *             ** **      ****    

consensus_20#1      ------------------------------------------------------------
consensus_20#2      AGAATTGACTTGAAGTTTTCCTACACTGGAAT---------------------------- 524
consensus_20#0      GGA-CCGGCACGAACCGCCTCGACTCGGCGTGTATCGCCTTGAGGGAGGGCAGCTCCTGG 835
                                                                                

consensus_20#1      ------------------------------------------------------------
consensus_20#2      ------------------------------------------------------------
consensus_20#0      CTGTAGCGCTGGTGCACGCTGCGCAGCTGCAGGTAGTCGGGCGGCGTCGGGAACGACCGC 895
                                                                                

consensus_20#1      ------------------------------------------------------------
consensus_20#2      ------------------------------------------------------------
consensus_20#0      TCCCCGCCCGAGGACGGCTGCCTGACCGAGCTCAGGTCGCTGAAGTACAGCGGCGTCCAC 955
                                                                                

consensus_20#1      -----------------------------------
consensus_20#2      -----------------------------------
consensus_20#0      GGCACCTGGGGCCCGCTCGGCGAGCTCGCCAGAAA 990
                                                       




Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)