These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2220#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 444 fasta sequence [CGTTAATTCGCACGATAATATACAAACTGAGCTGATATATCGCGGGATAAAAACTTGACTAGAAATCTATTTTAAAAAAGCGGTCAGACTTTTAACAGACTTCAACTGTGCATCGCGTTTAAATCCTGACAAATCGATTTACGGCAAAAGAAAGGTAAAAGTACATGAAATGTATGAAAGACTGAATTTCCATTTTAATAATTTGAATAAAATACACGGGTAAAAATTTCACGAGAAATAATATTCACCAGGGAAAAACAAGCACATACGAAATCCCAAATTTTTCCATAAATTGTGCAAGATACGAGTTCTTCCTCCTACTCCTCCTAGCTCGTTCCAAGCTCTTCCGGCTATAAACCGTCTATAGACCGTCTATAGACCGTCTATAGATAACAGCTTATACCCTGTTCATCTGTTTGATCGAGCAAGAGAAGCTTTCAACGT] [+] EMBL BI508842 [CGTTAATTCGCACGATAATATACAAACTGAGCTGATATATCGCGGGATAAAAACTTGACTAGAAATCTATTTTAAAAAAGCGGTCAGACTTTTAACAGACTTCAACTGTGCATCGCGTTTAAATCCTGACAAATCGATTTACGGCAAAAGAAAGGTAAAAGTACATGAAATGTATGAAAGACTGAATTTCCATTTTAATAATTTGAATAAAATACACGGGTAAAAATTTCACGAGAAATAATATTCACCAGGGAAAAACAAGCACATACGAAATCCCAAATTTTTCCATAAATTGTGCAAGATACGAGTTCTTCCTCCTACTCCTCCTAGCTCGTTCCAAGCTCTTCCGGCTATAAACCGTCTATAGACCGTCTATAGACCGTCTATAGATAACAGCTTATACCCTGTTCATCTGTTTGATCGAGCAAGAGAAGCTTTCAACGT] consensusID : consensus_2220#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 419 fasta sequence [CAATTGTCGATCTATAAAAATTTTATGCCATTTTAGAGAAAGAAGCTTGCCATTTTTAAATATTATCGATTAATTCGAAAATAATTTCGAAGAAGAAAAACTCGTATACGTATACAACGAACTCTCTCCCCTCGTTGAACTGAATTTCCAATGATGAATAGTGTATGCTCCCAAAGTACAAGAGAAAAAAAAGTCTCTGAATTGAAAGATTACCCTTCATGATAAAAAGAAGGAAAAAAACAGATTCGATAGAATATATAACTAACATTTACTAGTACTAACTATAAAATAACAAACTTCTCAGACAACAGAAGCATTAAACGAGAAACTTTCCCTCGCTGAATCCTACCTTTCGTTAATTCGCACGATAATATACAAACTGAGCTGATATATCGCGGGATAAAAACTTGACTAGAAAT] [+] EMBL BI517188 [CAATTGTCGATCTATAAAAATTTTATGCCATTTTAGAGAAAGAAGCTTGCCATTTTTAAATATTATCGATTAATTCGAAAATAATTTCGAAGAAGAAAAACTCGTATACGTATACAACGAACTCTCTCCCCTCGTTGAACTGAATTTCCAATGATGAATAGTGTATGCTCCCAAAGTACAAGAGAAAAAAAAGTCTCTGAATTGAAAGATTACCCTTCATGATAAAAAGAAGGAAAAAAACAGATTCGATAGAATATATAACTAACATTTACTAGTACTAACTATAAAATAACAAACTTCTCAGACAACAGAAGCATTAAACGAGAAACTTTCCCTCGCTGAATCCTACCTTTCGTTAATTCGCACGATAATATACAAACTGAGCTGATATATCGCGGGATAAAAACTTGACTAGAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2220#0 ---------------CGTTAATTCGCACGATAATATACAAACTGAGCTGATATATCGCGG 45 consensus_2220#1 CAATTGTCGATCTATAAAAATTTTATGCCATTTTAGAGAAAGAAGCTTGCCATTTTTAAA 60 * ** * ** ** * *** ** ** * consensus_2220#0 GATAAAAACTTGACTAGAAATCTATTTTAAAAAAG-------CGGTCAGACTTTTAACAG 98 consensus_2220#1 TATTATCGATTAATTCGAAAATAATTTCGAAGAAGAAAAACTCGTATACGTATACAACGA 120 ** * ** * * **** **** ** *** ** * * *** consensus_2220#0 ACTTCAACTGTGCATCGCGTTTAAATCCTGACAA--ATCGATTTACGGCAAAAGAAAGGT 156 consensus_2220#1 ACTCTCTCCCCTCGTTGAACTGAATTTCCAATGATGAATAGTGTATG-CTCCCAAAGTAC 179 *** * * * * * ** * * * * * * ** * * ** consensus_2220#0 AAAAGTACATGAAATGTATGAAAGACTGAATTTCCATTT-TAATAATTTGAATAAAATAC 215 consensus_2220#1 AAGAGAAAAAAAAGTCTCTGAATTGAAAGATTACCCTTCATGATAAAAAGAAGGAAAAAA 239 ** ** * * ** * * **** *** ** ** * **** *** *** * consensus_2220#0 ACGGGTAAAAATTTCACGAGAAATAATATTCACCAGGGAAAAACAAGCACATACGAAATC 275 consensus_2220#1 ACAGATTCGATAGAATATATAACTAACATTTACTAG-----TACTAAC---TATAAAATA 291 ** * * * * ** *** *** ** ** ** * * ** **** consensus_2220#0 CCAAATTTTTCCATAAATTGT-GCAAGATACGAGTT-CTTCCTCCTACTCCTCCTAGCTC 333 consensus_2220#1 ACAAACTTCTCAGACAACAGAAGCATTAAACGAGAAACTTTCCCTCGCTGAATCCTACCT 351 **** ** ** ** * *** * ***** *** * * ** * * consensus_2220#0 GTTCCAAGCTCTTCCGGCTATAAACCGTCTATAGACCGTCTATAGACCGTCTATAGATAA 393 consensus_2220#1 TTCGTTAATTCGCACGATAATATACAAACTGA-----GCTGATATATCGCG---GGATAA 403 * * ** ** *** ** ** * *** * ** ***** consensus_2220#0 CAGCTTATACCCTGTTCATCTGTTTGATCGAGCAAGAGAAGCTTTCAACGT 444 consensus_2220#1 AAACTTGACTAGAAAT----------------------------------- 419 * *** * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |