These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2250#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [CGAATATTCTAATTTCATTAATTGACGCACGCATTACACGGTCGATCATTAGTTTTGTTTTTTTTTTTCTTGTTTGTTCATTTCGTCAGAATATATATTAAAAAGAGGAAACGGTAAACAAAAAAAAAAATAGCGAGCGAAATTGTATTTTTAATATATATCTGTATAATCTGAATATATATATATATATATATATATATATATATATATATATATATATATATATATCTATACATATATATATATACATATATATATTCAGAATATATATATATTTTCTGGAGTTTCGCCACTAAAAAGGATATTGCGATTCAGCTTCGCNNNGAATTTTATATATAATTATCGAGAAGNNNATTATCATTATTATAATTATTATAATTATTATCATTATTATGAAAAATATAGCGTGTTCTCTTAAAGTGAAAATTTATATATGTGTGTGTGTGTGTGCGTGTGTGTGTATGTATATATA] [+] EMBL BI503732 [CGAATATTCTAATTTCATTAATTGACGCACGCATTACACGGTCGATCATTAGTTTTGTTTTTTTTTTTCTTGTTTGTTCATTTCGTCAGAATATATATTAAAAAGAGGAAACGGTAAACAAAAAAAAAAATAGCGAGCGAAATTGTATTTTTAATATATATCTGTATAATCTGAATATATATATATATATATATATATATATATATATATATATATATATATATATATCTATACATATATATATATACATATATATATTCAGAATATATATATATTTTCTGGAGTTTCGCCACTAAAAAGGATATTGCGATTCAGCTTCGCNNNGAATTTTATATATAATTATCGAGAAGNNNATTATCATTATTATAATTATTATAATTATTATCATTATTATGAAAAATATAGCGTGTTCTCTTAAAGTGAAAATTTATATATGTGTGTGTGTGTGTGCGTGTGTGTGTATGTATATATA] consensusID : consensus_2250#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [CGTTNNGCTTTACCTTTTTAAGGATCGTATCCGAATTACGATACCGGTTACATTAGATGAAATAAAATAGCATTATCTTCCACAAAATATTTCGAATTTCAAGAGCAGCTGGCTGCGAAAAAGGTACCATAGAGAGATTCGTTCGTCATTGATGGAACACGATCACAAGTATTGTACCTTACATTCCTTTGGCTATAAAATATAATAGTAAGAACATGACGACCGTGTGCATCGTGCGCTTTATGAATCATGCAATTATCATACCGCAAAAAAAAAAGAATAGAAAGAAGAGAGACAGAAAAAAAAAAAGAAATAGAGAAAAATATAGAAAATTGGGGAATTCATGCGATTAATTCATTAATTATAATCGGAAAAAGATATTTTTCAATTCGATTTGTGAATATGATATACGAATATTCTAATTTCATTAATTGACGCACGCATTACAC] [+] EMBL BI511109 [CGTTNNGCTTTACCTTTTTAAGGATCGTATCCGAATTACGATACCGGTTACATTAGATGAAATAAAATAGCATTATCTTCCACAAAATATTTCGAATTTCAAGAGCAGCTGGCTGCGAAAAAGGTACCATAGAGAGATTCGTTCGTCATTGATGGAACACGATCACAAGTATTGTACCTTACATTCCTTTGGCTATAAAATATAATAGTAAGAACATGACGACCGTGTGCATCGTGCGCTTTATGAATCATGCAATTATCATACCGCAAAAAAAAAAGAATAGAAAGAAGAGAGACAGAAAAAAAAAAAGAAATAGAGAAAAATATAGAAAATTGGGGAATTCATGCGATTAATTCATTAATTATAATCGGAAAAAGATATTTTTCAATTCGATTTGTGAATATGATATACGAATATTCTAATTTCATTAATTGACGCACGCATTACAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2250#0 CGAATATTCTAATTTCATTAATTGACGCACGCATTACACGGTCGATCATTAGTTTTGTTT 60 consensus_2250#1 ----CGTTNNGCTTTACCTTTTTAAGGATCGTATCCGAATTACGAT-ACCGGTTACATTA 55 ** *** * ** * * ** ** * **** * *** ** consensus_2250#0 TTTTTTTTCTTGTTTGTTCATTTCGTCAGAATATATATTAAAAAGAGGAAACGGTAAACA 120 consensus_2250#1 GATGAAATAAAATAGCATTATCTT-CCACAAAATATTTCGAATTTCAAGAGCAGCTGGCT 114 * * * * ** * ** ** **** * ** * * * * consensus_2250#0 AAAAAAAAAATAGCGAGCGAAATTGTATTTTTAATATATATCTGTATAATCTGAATATAT 180 consensus_2250#1 GCGAAAAAGGTACCATAGAGAGATTCGTTCGTCATTGATGGA-ACACGATCACAAGTATT 173 ***** ** * * * ** * ** ** * *** ** * consensus_2250#0 ATATATATATATATATATATATATATATATATATATATATATATATATCTATACATATAT 240 consensus_2250#1 GTACCT-TACATTCCTTTGGCTATA-AAATATAATAGTAAGAACATGACGAC-CGTGTGC 230 ** * ** ** * * **** * ***** ** * ** * * * * * consensus_2250#0 ATATATACATATATATATTCAGAATATATATAT-ATTTTCTGGAGTTTCGCCACTAAAAA 299 consensus_2250#1 AT-CGTGCGC---TTTATGAATCATGCAATTATCATACCGCAAAAAAAAAAGAATAGAAA 286 ** * * * *** * ** * *** ** * * ** *** consensus_2250#0 GGATATTGCGATTCAGCTTCGCNNNGAATTTTATATATAATTATCGAGAAGNNNATTATC 359 consensus_2250#1 GAAGA----GAGACAGAAAAAAAAAAAGAAATAGAGAAAAATATAGAAAATTGGGGAATT 342 * * * ** *** * ** * * ** *** ** ** ** consensus_2250#0 ATTATTATAATTATTATAATTATTATCATTATTATGAAAAATATAGCGTGTTCTCTTAAA 419 consensus_2250#1 CATGCGATTAATTCATTAATTATAATCG-------GAAAAAGATA-TTTTTCAATTCGAT 394 * ** * * ******* *** ****** *** * * * * consensus_2250#0 GTGAAAATTT-ATATATGTGTGTGTGTGTGTGCGTGTGTG-TGTATGTATATATA- 472 consensus_2250#1 TTGTGAATATGATATACGAATATTCTAATTTCATTAATTGACGCACGCAT-TACAC 449 ** *** * ***** * * * * * * ** * * * ** ** * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |