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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2264#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence
[TTCTTCTTCATCAATCTGTTGAAACAAAAAGTTATTTTCACCATGTCCCTCTGTGACTGTGACGATGAACTGGAATACAAACTACTCACCAGAGATAAGGTAGAGGATGCTCTGGCTATACAGGCGGAGACTATGAAACAGGAAAACCTGGCAATAGGTTTGGGGATGTTCGAAGAGGATGGAGCCCCGGAAGAAATGAACCTGCTCTTCAGGGAAGTTATCAAAGATGGCATGACGTTGATTGCCGTTGACAAGAGGACCGATGAAGTGGCAGCAGTGGCTTTTAACAAGCTTCGCGCGAAACCGAGGAAGGGCGAGAAGGACGAGCTGGACTCCTTCATAGAGGAGAATCTGAAACATCAGACGTGTAGAAAATTGATCAAGTTTCTCGATGACATCGACAATGTGGATATTTTTGAGAGGTACGATACGAACGGAGCGATGGAGGTGTTCTATCTTGGAACCGATCCACGGTACCAAGGTCGCGGGATCGGCCGTCGAATGATGCAGGAGTGTATCGGGTTCGGTCGAGGGCTGCTCAATGGCACGAGGAGAAGGACATCGATCGACGGGGTTATTCTTGAGCAGAGC]
[+] EMBL BI505423 [TTCTTCTTCATCAATCTGTTGAAACAAAAAGTTATTTTCACCATGTCCCTCTGTGACTGTGACGATGAACTGGAATACAAACTACTCACCAGAGATAAGGTAGAGGATGCTCTGGCTATACAGGCGGAGACTATGAAACAGGAAAACCTGGCAATAGGTTTGGGGATGTTCGAAGAGGATGGAGCCCCGGAAGAAATGAACCTGCTCTTCAGGGAAGTTATCAAAGATGGCATGACGTTGATTGCCGTTGACAAGAGGACCGATGAAGTGGCAGCAGTGGCTTTTAACAAGCTTCGCGCGAAACCGAGGAAGGGCGAGAAGGACGAGCTGGACTCCTTCATAGAGGAGAATCTGAAACATCAGACGTGTAGAAAATTGATCAAGTTTCTCGATGACATCGACAATGTGGATATTTTTGAGAGGTACGATACGAACGGAGCGATGGAGGTGTTCTATCTTGGAACCGATCCACGGTACCAAGGTCGCGGGATCGGCCGTCGAATGATGCAGGAGTGTATCGGGTTCGGTCGAGGGCTGCTCAATGGCACGAGGAGAAGGACATCGATCGACGGGGTTATTCTTGAGCAGAGC]
consensusID : consensus_2264#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 513 fasta sequence
[CGATGAACTGGAATACAAACTACTCACCAGAGATAAGGTAGAGGATGCTCTGGNNNACAGGCGGAGACTATGAAACAGGAAAACCTGGCAATAGGTTTGGGGATGTTCGAAGAGGATGGAGCCCCGGAAGAAATGAACCTGCTCTTCAGGGAAGTTATCAAAGATGGCATGACGTTGATTGCCGTTGACAAGAGGACCGATGAAGTGGCAGCAGTGGCTTTTAACAAGCTTCGCGTAACTTTTCACTCCATCTCCATTAGAAATTAAACCTTAATGTTTCCTTTTTCACAAGACTTACTTTTGTATCTTTGCAAGGCGAAACCGAGGAAGGGCGAGAAGGACGAGCTGGACTCCTTCATAGAGGAGAATCTGAAACATCAGACGTGTAGAAAATTGATCAAGTTTCTCGATGACATCGACAATGTGGATATTTTTGAGAGGTACGATACGAACGGAGCGATGGAGGTGTTCTATCTTGGAACCGATCCACGGTACCAAGGTCGCGGGATCGGC]
[+] EMBL BI503705 [CGATGAACTGGAATACAAACTACTCACCAGAGATAAGGTAGAGGATGCTCTGGNNNACAGGCGGAGACTATGAAACAGGAAAACCTGGCAATAGGTTTGGGGATGTTCGAAGAGGATGGAGCCCCGGAAGAAATGAACCTGCTCTTCAGGGAAGTTATCAAAGATGGCATGACGTTGATTGCCGTTGACAAGAGGACCGATGAAGTGGCAGCAGTGGCTTTTAACAAGCTTCGCGTAACTTTTCACTCCATCTCCATTAGAAATTAAACCTTAATGTTTCCTTTTTCACAAGACTTACTTTTGTATCTTTGCAAGGCGAAACCGAGGAAGGGCGAGAAGGACGAGCTGGACTCCTTCATAGAGGAGAATCTGAAACATCAGACGTGTAGAAAATTGATCAAGTTTCTCGATGACATCGACAATGTGGATATTTTTGAGAGGTACGATACGAACGGAGCGATGGAGGTGTTCTATCTTGGAACCGATCCACGGTACCAAGGTCGCGGGATCGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2264#0 TTCTTCTTCATCAATCTGTTGAAACAAAAAGTTATTTTCACCATGTCCCTCTGTGACTGT 60
consensus_2264#1 ------------------------------------------------------------
consensus_2264#0 GACGATGAACTGGAATACAAACTACTCACCAGAGATAAGGTAGAGGATGCTCTGGCTATA 120
consensus_2264#1 --CGATGAACTGGAATACAAACTACTCACCAGAGATAAGGTAGAGGATGCTCTGGNNN-A 57
***************************************************** *
consensus_2264#0 CAGGCGGAGACTATGAAACAGGAAAACCTGGCAATAGGTTTGGGGATGTTCGAAGAGGAT 180
consensus_2264#1 CAGGCGGAGACTATGAAACAGGAAAACCTGGCAATAGGTTTGGGGATGTTCGAAGAGGAT 117
************************************************************
consensus_2264#0 GGAGCCCCGGAAGAAATGAACCTGCTCTTCAGGGAAGTTATCAAAGATGGCATGACGTTG 240
consensus_2264#1 GGAGCCCCGGAAGAAATGAACCTGCTCTTCAGGGAAGTTATCAAAGATGGCATGACGTTG 177
************************************************************
consensus_2264#0 ATTGCCGTTGACAAGAGGACCGATGAAGTGGCAGCAGTGGCTTTTAACAAGCTTCGCG-- 298
consensus_2264#1 ATTGCCGTTGACAAGAGGACCGATGAAGTGGCAGCAGTGGCTTTTAACAAGCTTCGCGTA 237
**********************************************************
consensus_2264#0 ------------------------------------------------------------
consensus_2264#1 ACTTTTCACTCCATCTCCATTAGAAATTAAACCTTAATGTTTCCTTTTTCACAAGACTTA 297
consensus_2264#0 -------------------CGAAACCGAGGAAGGGCGAGAAGGACGAGCTGGACTCCTTC 339
consensus_2264#1 CTTTTGTATCTTTGCAAGGCGAAACCGAGGAAGGGCGAGAAGGACGAGCTGGACTCCTTC 357
*****************************************
consensus_2264#0 ATAGAGGAGAATCTGAAACATCAGACGTGTAGAAAATTGATCAAGTTTCTCGATGACATC 399
consensus_2264#1 ATAGAGGAGAATCTGAAACATCAGACGTGTAGAAAATTGATCAAGTTTCTCGATGACATC 417
************************************************************
consensus_2264#0 GACAATGTGGATATTTTTGAGAGGTACGATACGAACGGAGCGATGGAGGTGTTCTATCTT 459
consensus_2264#1 GACAATGTGGATATTTTTGAGAGGTACGATACGAACGGAGCGATGGAGGTGTTCTATCTT 477
************************************************************
consensus_2264#0 GGAACCGATCCACGGTACCAAGGTCGCGGGATCGGCCGTCGAATGATGCAGGAGTGTATC 519
consensus_2264#1 GGAACCGATCCACGGTACCAAGGTCGCGGGATCGGC------------------------ 513
************************************
consensus_2264#0 GGGTTCGGTCGAGGGCTGCTCAATGGCACGAGGAGAAGGACATCGATCGACGGGGTTATT 579
consensus_2264#1 ------------------------------------------------------------
consensus_2264#0 CTTGAGCAGAGC 591
consensus_2264#1 ------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |