These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2368#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 208 fasta sequence [TGTGAAAATGGTGCGAGAGTGATCGAGATCGTACTTTTCGAGAAAGTACGATCCGAAACTCGATCCGGGAGAGAGGGAGAGAATGAGAGGGAGAGAGAGAGAGAGAGAGTGGGAGAAGAAGAAAAGAAGCCGAGGATGATCGAGACGAGCAAAGAGTTACAAGAGAACGAGAGAAAGAAGGCGGTCGTTTTTGCAGGGGGTCGGGTTG] [+] EMBL BI514990 [TGTGAAAATGGTGCGAGAGTGATCGAGATCGTACTTTTCGAGAAAGTACGATCCGAAACTCGATCCGGGAGAGAGGGAGAGAATGAGAGGGAGAGAGAGAGAGAGAGAGTGGGAGAAGAAGAAAAGAAGCCGAGGATGATCGAGACGAGCAAAGAGTTACAAGAGAACGAGAGAAAGAAGGCGGTCGTTTTTGCAGGGGGTCGGGTTG] consensusID : consensus_2368#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 181 fasta sequence [CTCGAGCGTGGGACGGGGGAGGGGAGGGGAGAGTGGAGGGGAAAGGAAACGGATTCGAGGAGAGAGAGTGGGAGAAGAAGAAAAGAAGCCGAGGATGATCGAGACGAGCAAAGAGTTACAAGAGAACGAGAGAAAGAAGGCGGTCGTTTTTGCAGGGGGTCGGGTTGTCGTTTCACCAACC] [+] EMBL BI514012 [CTCGAGCGTGGGACGGGGGAGGGGAGGGGAGAGTGGAGGGGAAAGGAAACGGATTCGAGGAGAGAGAGTGGGAGAAGAAGAAAAGAAGCCGAGGATGATCGAGACGAGCAAAGAGTTACAAGAGAACGAGAGAAAGAAGGCGGTCGTTTTTGCAGGGGGTCGGGTTGTCGTTTCACCAACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2368#0 TGTGAAAATGGTGCGAGAGTGATCGAGATCGTACTTTTCGAGAAAGTACGATCCGAAACT 60 consensus_2368#1 --------------------------------------CTCGAGCGTGGGACGGGGGAGG 22 * ** ** ** * * consensus_2368#0 CGATCCGGGAGAGAGGGAGAGAATGAGAGGGAGAGAGAGAGAGAGAGAGTGGGAGAAGAA 120 consensus_2368#1 GGA--GGGGAGAGTGGAGGGGAAAGGAAACGGATTCGAG-GAGAGAGAGTGGGAGAAGAA 79 ** ******* ** * *** * * * *** ******************** consensus_2368#0 GAAAAGAAGCCGAGGATGATCGAGACGAGCAAAGAGTTACAAGAGAACGAGAGAAAGAAG 180 consensus_2368#1 GAAAAGAAGCCGAGGATGATCGAGACGAGCAAAGAGTTACAAGAGAACGAGAGAAAGAAG 139 ************************************************************ consensus_2368#0 GCGGTCGTTTTTGCAGGGGGTCGGGTTG-------------- 208 consensus_2368#1 GCGGTCGTTTTTGCAGGGGGTCGGGTTGTCGTTTCACCAACC 181 **************************** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |