These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2400#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 428 fasta sequence [ATGGAACGGCTTTCGAGAGTGGCATGTTATTTTCGATGGATGAGAAACGCGACATCTCATGATGCAAGTGAGGTTGAGGACGAACAGAAAACTATTAAAGTTGAACGATATCGAAATGTCGGATGTAATTTTGAAGCTTCGAGGCGACTTTGTGGTATTTTGGAAAGTATCCTTCTTTGGGAGAATTCTGTGAATAGTATTTCTGTCGTCATCGTATTTAATATACTGTTTTGGGTATTATTGTATTAGAGGTTTGAGGCTTTGCTGCAGCCAGCAGTGCTGCACTGGTCGTTGTTCTCTGTTATAGTACCTTAGAAACTCAAGTTCAAAAAGAAAATAAAGCATTGGATTTAGCTGCCTCTTATGCAAAAACAGAACAAATTGAGAAAATAGGAAAAAAAATAAAAACAGCAATTCATAATTTAAAG] [+] EMBL BI504796 [ATGGAACGGCTTTCGAGAGTGGCATGTTATTTTCGATGGATGAGAAACGCGACATCTCATGATGCAAGTGAGGTTGAGGACGAACAGAAAACTATTAAAGTTGAACGATATCGAAATGTCGGATGTAATTTTGAAGCTTCGAGGCGACTTTGTGGTATTTTGGAAAGTATCCTTCTTTGGGAGAATTCTGTGAATAGTATTTCTGTCGTCATCGTATTTAATATACTGTTTTGGGTATTATTGTATTAGAGGTTTGAGGCTTTGCTGCAGCCAGCAGTGCTGCACTGGTCGTTGTTCTCTGTTATAGTACCTTAGAAACTCAAGTTCAAAAAGAAAATAAAGCATTGGATTTAGCTGCCTCTTATGCAAAAACAGAACAAATTGAGAAAATAGGAAAAAAAATAAAAACAGCAATTCATAATTTAAAG] consensusID : consensus_2400#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence [TTCATTTGTTCTTTGTCAGTCGTTTAAGTCTTAATCCAGCCTTTCGTTTATATTCATTTCTATCTTTCTCACTTTTTGTTCTTTCTTCTCTGTCGTGTCAGCCTATCTCTTTCTTTCTCGATCTTTCTTTCCTTCTCACTCTATTCTCCGATGCAAAGCAGAAGAAACCCCCGCGGTTGCTCGTTCGTTCTCAAAAGTCTTACTCTCGTTGTCACGCGCTAAAAATACTCCCGCACAGTCTTCCGAGGGTGTACCATGCCAAAGGAGTACGGGAATTAGGACGACAAAAGCAGTCAACGTCGACCTGGAACTGTCATGGAACGGCTTTCGAGAGTGGCATGTTATTTT] [+] EMBL BI503392 [TTCATTTGTTCTTTGTCAGTCGTTTAAGTCTTAATCCAGCCTTTCGTTTATATTCATTTCTATCTTTCTCACTTTTTGTTCTTTCTTCTCTGTCGTGTCAGCCTATCTCTTTCTTTCTCGATCTTTCTTTCCTTCTCACTCTATTCTCCGATGCAAAGCAGAAGAAACCCCCGCGGTTGCTCGTTCGTTCTCAAAAGTCTTACTCTCGTTGTCACGCGCTAAAAATACTCCCGCACAGTCTTCCGAGGGTGTACCATGCCAAAGGAGTACGGGAATTAGGACGACAAAAGCAGTCAACGTCGACCTGGAACTGTCATGGAACGGCTTTCGAGAGTGGCATGTTATTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2400#0 ATGGAACGGCTTTCGAGAGTGGCATGTTATTTTCGATGGATGAGAAACGCGACATCTCAT 60 consensus_2400#1 ------------------------------------------------------------ consensus_2400#0 GATGCAAGTGAGGTTGAGGACGAACAGAAAACTATTAAAGTTGAACGATATCGAAATGTC 120 consensus_2400#1 --TTCATTTGTTCTTT--GTCAGTCGTTTAAGTCTTAATCCAGCCTTTCGTTTATAT-TC 55 * ** ** ** * * * ** * **** * * * ** ** consensus_2400#0 GGATGTAATTTTGAAGCTTCGAGGCGACTTTGTGGTATTTTGGAAAG-TATCCTTCTTTG 179 consensus_2400#1 ATTTCTATCTTTCTCACTTTTTGTTCTTTCTTCTCTGTCGTGTCAGCCTATCTCTTTCT- 114 * ** *** *** * * * * * ** * **** * * * consensus_2400#0 GGAGAATTCTGTGAATAGTATTTCTGTCGTCATCGTATTTAATATACTGTTTTGGGTATT 239 consensus_2400#1 ------TTCT-----CGATCTTTCTTTCCTTCTCAC-TCTATTCTCCGATGCAAAGCAGA 162 **** * ***** ** * ** * ** * * * * * * consensus_2400#0 ATTGTATTAGAGGTTTGAGGCTTTGCTGCAGCCAGCAGTGCTGCACTGGTCGTTGTTCTC 299 consensus_2400#1 AGAAACCCCCGCGGTTGCTCGTTCGTTC---TCAAAAGTCTTACTCTCGTTGTCACGCGC 219 * * *** ** * * ** *** * * ** ** ** * * consensus_2400#0 TGTTA-TAGTACCTTAGAAACTC----AAGTTCAAAAAGAAAATAAAGCATTGGATTTAG 354 consensus_2400#1 TAAAAATACTCCCGCACAGTCTTCCGAGGGTGTACCATGCCAAAGGAGTACGGGAATTAG 279 * * ** * ** * * ** ** * * * ** ** * *** **** consensus_2400#0 CTGCCTCTTATGCAAAAACAGAACAAATTGAGAAAATAGGAAAAAAAATAAAAACAGCAA 414 consensus_2400#1 G-ACGACAAAAGCAGTCA-ACGTCGACCTGGAACTGTCATGGAACGGCTTTCGAGAGTGG 337 * * * *** * * * * ** * * ** * * ** consensus_2400#0 TTCATAATTTAAAG 428 consensus_2400#1 CATGTTATTTT--- 348 * **** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |