These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2425#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 470 fasta sequence [ACTGCTTATTAATATTTATAAGCGGTTGGTTAACGCTTCAAAGTGAATTCATAGTTTGTGAAGATCAGGCTACAGAAGATTTGCGTCTGAACAAATGCCGACATCGAATTTCCTCGTTATTTCTTGTGTTTTGCCAATTTTTTAAACAATCGCGAGTGCCGGAACGCGCATTGAACTTACTGAATTAGATATATACGTACAGATAGTAGTATTACTGTATATTATATCGGTGAAATTTTGGAAAAGAAGAAAAAGATGGTGCGTGGTCTGTCGCAGTGGACGAAAACCTTGAGCTTCCCTGCGAGGGTGTCCCCCCAGAGGCCTGCCAAGGAGTCGAAAGGGTTTCATGTGAGCCCCAGTGCTAGTCCCACATCGCCACCCAGCCCTATCAACGACAACATGGACAAGGCGCCGATTATTACCGATGAGATAACGGTCTGTTGCTATACGCTTCAAGCAACCATGGTTTA] [+] EMBL BI503340 [ACTGCTTATTAATATTTATAAGCGGTTGGTTAACGCTTCAAAGTGAATTCATAGTTTGTGAAGATCAGGCTACAGAAGATTTGCGTCTGAACAAATGCCGACATCGAATTTCCTCGTTATTTCTTGTGTTTTGCCAATTTTTTAAACAATCGCGAGTGCCGGAACGCGCATTGAACTTACTGAATTAGATATATACGTACAGATAGTAGTATTACTGTATATTATATCGGTGAAATTTTGGAAAAGAAGAAAAAGATGGTGCGTGGTCTGTCGCAGTGGACGAAAACCTTGAGCTTCCCTGCGAGGGTGTCCCCCCAGAGGCCTGCCAAGGAGTCGAAAGGGTTTCATGTGAGCCCCAGTGCTAGTCCCACATCGCCACCCAGCCCTATCAACGACAACATGGACAAGGCGCCGATTATTACCGATGAGATAACGGTCTGTTGCTATACGCTTCAAGCAACCATGGTTTA] consensusID : consensus_2425#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 395 fasta sequence [CACCGATATATACGTACAGATAGTAGTATTACTGTATATTATATCGGTGAAATTTTGGAAAAGAAGAAAAAGATGGTGCGTGGTCTGTCGCAGTGGACGAAAACCTTGAGCTTCCCTGCGAGGGTGTCCCCCCAGAGGCCTGCCAAGGAGTCGAAAGGGTTTCATGTGAGCCCCAGTGCTAGTCCCACANCGCCACCCAGCCCTATCAACGACAACATGGACAAGGCGCCGATTATTACCGATGAGGTTAGAATCTCACTTTTTTTATTCTAACATATTTATCGTGGTTAATGGTAATGCTTTTTGGAAATTTAATCTATATTATATTAATGATGATTGATTTCATAAGAGAGAAAAATAATGGTAGATTGTGTAATTCTTTGTATATGTAAAAA] [+] EMBL BI508871 [CACCGATATATACGTACAGATAGTAGTATTACTGTATATTATATCGGTGAAATTTTGGAAAAGAAGAAAAAGATGGTGCGTGGTCTGTCGCAGTGGACGAAAACCTTGAGCTTCCCTGCGAGGGTGTCCCCCCAGAGGCCTGCCAAGGAGTCGAAAGGGTTTCATGTGAGCCCCAGTGCTAGTCCCACANCGCCACCCAGCCCTATCAACGACAACATGGACAAGGCGCCGATTATTACCGATGAGGTTAGAATCTCACTTTTTTTATTCTAACATATTTATCGTGGTTAATGGTAATGCTTTTTGGAAATTTAATCTATATTATATTAATGATGATTGATTTCATAAGAGAGAAAAATAATGGTAGATTGTGTAATTCTTTGTATATGTAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2425#0 ACTGCTTATTAATATTTATAAGCGGTTGGTTAACGCTTCAAAGTGAATTCATAGTTTGTG 60 consensus_2425#1 ------------------------------------------------------------ consensus_2425#0 AAGATCAGGCTACAGAAGATTTGCGTCTGAACAAATGCCGACATCGAATTTCCTCGTTAT 120 consensus_2425#1 ------------------------------------------------------------ consensus_2425#0 TTCTTGTGTTTTGCCAATTTTTTAAACAATCGCGAGTGCCGGAACGCGCATTGAACTTAC 180 consensus_2425#1 ------------------------------------------------------------ consensus_2425#0 TGAATTAGATATATACGTACAGATAGTAGTATTACTGTATATTATATCGGTGAAATTTTG 240 consensus_2425#1 ---CACCGATATATACGTACAGATAGTAGTATTACTGTATATTATATCGGTGAAATTTTG 57 ***************************************************** consensus_2425#0 GAAAAGAAGAAAAAGATGGTGCGTGGTCTGTCGCAGTGGACGAAAACCTTGAGCTTCCCT 300 consensus_2425#1 GAAAAGAAGAAAAAGATGGTGCGTGGTCTGTCGCAGTGGACGAAAACCTTGAGCTTCCCT 117 ************************************************************ consensus_2425#0 GCGAGGGTGTCCCCCCAGAGGCCTGCCAAGGAGTCGAAAGGGTTTCATGTGAGCCCCAGT 360 consensus_2425#1 GCGAGGGTGTCCCCCCAGAGGCCTGCCAAGGAGTCGAAAGGGTTTCATGTGAGCCCCAGT 177 ************************************************************ consensus_2425#0 GCTAGTCCCACATCGCCACCCAGCCCTATCAACGACAACATGGACAAGGCGCCGATTATT 420 consensus_2425#1 GCTAGTCCCACANCGCCACCCAGCCCTATCAACGACAACATGGACAAGGCGCCGATTATT 237 ************ *********************************************** consensus_2425#0 ACCGATGAGATAACGGTCTGTTGCTATACGCTTCAAG----CAACCATGGTTTA------ 470 consensus_2425#1 ACCGATGAGGTTAGAATCTCACTTTTTTTATTCTAACATATTTATCGTGGTTAATGGTAA 297 ********* * * *** * * * ** * * ***** * consensus_2425#0 ------------------------------------------------------------ consensus_2425#1 TGCTTTTTGGAAATTTAATCTATATTATATTAATGATGATTGATTTCATAAGAGAGAAAA 357 consensus_2425#0 -------------------------------------- consensus_2425#1 ATAATGGTAGATTGTGTAATTCTTTGTATATGTAAAAA 395 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |