These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2498#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 358 fasta sequence [GGTACGAGAGTGAACGACGGCGGACGGTTGTTGTTGGTGTTGAGCCTGGTGGTGATCGGCACGCTGTTCAGCCACAGGATCGCGACCCGCGCGTACGACGAGGTACCGGAGATATTCGATCCGAAAGGGTTCGTCTAGCTCGTCGAGCGACGGCCGAGTCTCCGGACCACCGTCGAGGGAAGCCGCGGGGGAAGCCAATGGAACGCAGAAGCCACGGGCCGGAGAAGAAACGATCCACGACCGCGCGTCACCGGCGAGTCGTCGCCGACAAGCGAAACAAACATATCATCAACGATGGGATGACGGAGAACAGTCGATCGATCTGACGAGTCGGTCGCGCTTCGGCAGTGAGAGAGAG] [+] EMBL BI514418 [GGTACGAGAGTGAACGACGGCGGACGGTTGTTGTTGGTGTTGAGCCTGGTGGTGATCGGCACGCTGTTCAGCCACAGGATCGCGACCCGCGCGTACGACGAGGTACCGGAGATATTCGATCCGAAAGGGTTCGTCTAGCTCGTCGAGCGACGGCCGAGTCTCCGGACCACCGTCGAGGGAAGCCGCGGGGGAAGCCAATGGAACGCAGAAGCCACGGGCCGGAGAAGAAACGATCCACGACCGCGCGTCACCGGCGAGTCGTCGCCGACAAGCGAAACAAACATATCATCAACGATGGGATGACGGAGAACAGTCGATCGATCTGACGAGTCGGTCGCGCTTCGGCAGTGAGAGAGAG] consensusID : consensus_2498#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 183 fasta sequence [GTCGCGCTTCGGCAGTGAGAGAGAGAAAAAAAGAAAATTGCAATTGACGGATTGCGTTCGGTGACGGAGGGGGGGGGGGGGGTATAGGCTGGATGTGGACGAAGAACCAAAAACCATTCCAAAAATAGTTTCCTTGAAATCGAAGTTTTTTTCTTTCGTTTCTTCCTTTCCAATTATTTTTAT] [+] EMBL BI512506 [GTCGCGCTTCGGCAGTGAGAGAGAGAAAAAAAGAAAATTGCAATTGACGGATTGCGTTCGGTGACGGAGGGGGGGGGGGGGGTATAGGCTGGATGTGGACGAAGAACCAAAAACCATTCCAAAAATAGTTTCCTTGAAATCGAAGTTTTTTTCTTTCGTTTCTTCCTTTCCAATTATTTTTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2498#0 GGTACGAGAGTGAACGACGGCGGACGGTTGTTGTTGGTGTTGAGCCTGGTGGTGATCGGC 60 consensus_2498#1 ------------------------------------------------------------ consensus_2498#0 ACGCTGTTCAGCCACAGGATCGCGACCCGCGCGTACGACGAGGTACCGGAGATATTCGAT 120 consensus_2498#1 ------------------GTCGCGCTTCGGCAGTGAGAGAGAGAAAAAAAGAAAATTGCA 42 ***** ** ** ** * * *** * * * consensus_2498#0 CCGAAAGGGTTCGTCTAGCTCGTCGAGCGACGGCCGAGTCTCCGGACCACCGTCGAGGGA 180 consensus_2498#1 ATTGACGGATTGCGTTCGGTGACGGAGGGGGGGGGGGGGGTATAGGCTGGATGTGGACGA 102 * ** ** * * * *** * ** * * * * * * ** consensus_2498#0 AGCCGCGGGGGAAGCCAATGGAACGCAGAAGCCACGGGCCGGAGAAGAAACGATCCACGA 240 consensus_2498#1 AGAACCA---AAAACCATTCCAAA--AATAGTTTC--CTTGAAATCGAAGTTTTTTTCTT 155 ** * ** *** * ** * ** * * * *** * * consensus_2498#0 CCGCGCGTCACCGGCGAGTCGTCGCCGACAAGCGAAACAAACATATCATCAACGATGGGA 300 consensus_2498#1 TCGTTTCTTCCTTTCCAATTATTTTTAT-------------------------------- 183 ** * * * * * * consensus_2498#0 TGACGGAGAACAGTCGATCGATCTGACGAGTCGGTCGCGCTTCGGCAGTGAGAGAGAG 358 consensus_2498#1 ---------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |