These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2526#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [GGAAAAAAAATAGTCTTCTCAGTTCCCGCCGCGTCTGGCAGGATTCGAAATTCTTAAAAACGGTTCGCGTCCACGTTGAACGAGGACAAGGTCGAGGGTGGTGCACAAGCGAATTCGCCGCGATTAGGGTGCGACGTGGACGCGAAACCTGTCTTTCAAAGTCCCTCCTTGAACGCAGGATGGTCGGTCGGTGCGTTATAATAGGGGAGAAAAAAGAAAAAGATGGTTTCGAAAACGATTTGGACTATTTTCAAGGTGATAGGATCAAAGATTGAACGATTGTAAAGAATAATCTAATATTTAAACTAACTATACAGTATAATAACTATATTCCTAATTTTAGAAATTCGAAACGTTTCTCTGTGATCAGAAATGATCATATTTGAAACGGGATAAAAATAATAATTTCGATTGCACAAGTCACGATACGCCATGTGATTCAAATAAAATTCATCGTCAAATTTTTCATAAAGAGAGAGCATTATAAATATTTTGCGAAATGAAATTTCATTAAAAAAAAAA] [+] EMBL BI505545 [GGAAAAAAAATAGTCTTCTCAGTTCCCGCCGCGTCTGGCAGGATTCGAAATTCTTAAAAACGGTTCGCGTCCACGTTGAACGAGGACAAGGTCGAGGGTGGTGCACAAGCGAATTCGCCGCGATTAGGGTGCGACGTGGACGCGAAACCTGTCTTTCAAAGTCCCTCCTTGAACGCAGGATGGTCGGTCGGTGCGTTATAATAGGGGAGAAAAAAGAAAAAGATGGTTTCGAAAACGATTTGGACTATTTTCAAGGTGATAGGATCAAAGATTGAACGATTGTAAAGAATAATCTAATATTTAAACTAACTATACAGTATAATAACTATATTCCTAATTTTAGAAATTCGAAACGTTTCTCTGTGATCAGAAATGATCATATTTGAAACGGGATAAAAATAATAATTTCGATTGCACAAGTCACGATACGCCATGTGATTCAAATAAAATTCATCGTCAAATTTTTCATAAAGAGAGAGCATTATAAATATTTTGCGAAATGAAATTTCATTAAAAAAAAAA] consensusID : consensus_2526#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 211 fasta sequence [CGTCCACGTTGAACGAGGACAAGGTCGAGGGTGGTGCACAAGCGAATTCGCCGCGATTAGGGTGCGACGTGGACGCGAAACCTGTCTTTCAAAGTCCCTCCTTGAACGCAGGATGGTCGGTCGGTCGGTCGGTCGTCTCGCGGCCCGAAAACAACCCCTGCTCCAGCAAACCCACCCCGCGACATTTGTCCCTCCACCCACCCCCAAAACT] [+] EMBL BI503141 [CGTCCACGTTGAACGAGGACAAGGTCGAGGGTGGTGCACAAGCGAATTCGCCGCGATTAGGGTGCGACGTGGACGCGAAACCTGTCTTTCAAAGTCCCTCCTTGAACGCAGGATGGTCGGTCGGTCGGTCGGTCGTCTCGCGGCCCGAAAACAACCCCTGCTCCAGCAAACCCACCCCGCGACATTTGTCCCTCCACCCACCCCCAAAACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2526#0 GGAAAAAAAATAGTCTTCTCAGTTCCCGCCGCGTCTGGCAGGATTCGAAATTCTTAAAAA 60 consensus_2526#1 ------------------------------------------------------------ consensus_2526#0 CGGTTCGCGTCCACGTTGAACGAGGACAAGGTCGAGGGTGGTGCACAAGCGAATTCGCCG 120 consensus_2526#1 -------CGTCCACGTTGAACGAGGACAAGGTCGAGGGTGGTGCACAAGCGAATTCGCCG 53 ***************************************************** consensus_2526#0 CGATTAGGGTGCGACGTGGACGCGAAACCTGTCTTTCAAAGTCCCTCCTTGAACGCAGGA 180 consensus_2526#1 CGATTAGGGTGCGACGTGGACGCGAAACCTGTCTTTCAAAGTCCCTCCTTGAACGCAGGA 113 ************************************************************ consensus_2526#0 TGGTCGGTCGGTGCGTTA-TAATAGGGGAGAAAAAAGAAAAAGATGGTTTCGAAAA---C 236 consensus_2526#1 TGGTCGGTCGGTCGGTCGGTCGTCTCGCGGCCCGAAAACAACCCCTGCTCCAGCAAACCC 173 ************ ** * * * * ** * ** * * * ** * consensus_2526#0 GATTTGGACTATTT-TCAAGGTGATAGGATCAAAGATTGAACGATTGTAAAGAATAATCT 295 consensus_2526#1 ACCCCGCGACATTTGTCCCTCCACCCACCCCCAAAACT---------------------- 211 * **** ** * ** * * consensus_2526#0 AATATTTAAACTAACTATACAGTATAATAACTATATTCCTAATTTTAGAAATTCGAAACG 355 consensus_2526#1 ------------------------------------------------------------ consensus_2526#0 TTTCTCTGTGATCAGAAATGATCATATTTGAAACGGGATAAAAATAATAATTTCGATTGC 415 consensus_2526#1 ------------------------------------------------------------ consensus_2526#0 ACAAGTCACGATACGCCATGTGATTCAAATAAAATTCATCGTCAAATTTTTCATAAAGAG 475 consensus_2526#1 ------------------------------------------------------------ consensus_2526#0 AGAGCATTATAAATATTTTGCGAAATGAAATTTCATTAAAAAAAAAA 522 consensus_2526#1 ----------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |