These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2546#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence [TTCTGTTGCATTACGATATGTTGAAAACAAATTTAACGATAGACATATCAGCACATTGCAGGCTTCCTTTTTAAATAAAAAATTGACTATACATGAAAAGAAAGTAAACTTGGCAATATGGGATACTGCTGGTCAAGAAAAATTTCATGCATTGGGACCAATTTATTATAGAATGTCAAATGGTGCCATTATAGTTTATGATGTTACTGATTACGATACATTCTTAAGGGTTATAAATTGGGTTACAGAACTTAGGAAAATGTTAGGCAGTGGAATTTGTTTAGCAATAGCTGGAAATAAAATAGATCTTGAAAAGGATAGACGTGTTTATATCGAAGAAGCAGAAGAGTTTGCTAATAAAGCAGGAGCTATGCATTTTCATATTTCTGCCAAATTAAATGAAAATATTGAAGAAATGTTTTTTCAATTAACAGTACGAATGATAGAACATGCAGATCTAATGGAACAAAAATCTACATTATCAAGAACAA] [+] EMBL BI513740 [TTCTGTTGCATTACGATATGTTGAAAACAAATTTAACGATAGACATATCAGCACATTGCAGGCTTCCTTTTTAAATAAAAAATTGACTATACATGAAAAGAAAGTAAACTTGGCAATATGGGATACTGCTGGTCAAGAAAAATTTCATGCATTGGGACCAATTTATTATAGAATGTCAAATGGTGCCATTATAGTTTATGATGTTACTGATTACGATACATTCTTAAGGGTTATAAATTGGGTTACAGAACTTAGGAAAATGTTAGGCAGTGGAATTTGTTTAGCAATAGCTGGAAATAAAATAGATCTTGAAAAGGATAGACGTGTTTATATCGAAGAAGCAGAAGAGTTTGCTAATAAAGCAGGAGCTATGCATTTTCATATTTCTGCCAAATTAAATGAAAATATTGAAGAAATGTTTTTTCAATTAACAGTACGAATGATAGAACATGCAGATCTAATGGAACAAAAATCTACATTATCAAGAACAA] consensusID : consensus_2546#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence [CTATAATTTCAAAGTTGTGTTGCTTGGCGAAGGATGTGTTGGAAAAACTTCTGTTGCATTACGATATGTTGAAAACAAATTTAACGATAGACATATCAGCACATTGCAGGCTTCCTTTTTAAATAAAAAATTGACTATACATGAAAAGAAAGTAAACTTGGCAATATGGGATACTGCTGGTCAAGAAAAATTTCATGCATTGGGACCAATTTATTATAGAATGTCAAATGNNNCCATTATAGTTTATGATGTTACTGATTACGATACATTCTTAAGGAACTTAGGAAAATGTTAGGCAGTGGAATTTGTTTAGCAATAGCTGGAAATAAAATAGATCTTGAAAAGGATAGAC] [+] EMBL BI516117 [CTATAATTTCAAAGTTGTGTTGCTTGGCGAAGGATGTGTTGGAAAAACTTCTGTTGCATTACGATATGTTGAAAACAAATTTAACGATAGACATATCAGCACATTGCAGGCTTCCTTTTTAAATAAAAAATTGACTATACATGAAAAGAAAGTAAACTTGGCAATATGGGATACTGCTGGTCAAGAAAAATTTCATGCATTGGGACCAATTTATTATAGAATGTCAAATGNNNCCATTATAGTTTATGATGTTACTGATTACGATACATTCTTAAGGAACTTAGGAAAATGTTAGGCAGTGGAATTTGTTTAGCAATAGCTGGAAATAAAATAGATCTTGAAAAGGATAGAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2546#0 ------------------------------------------------TTCTGTTGCATT 12 consensus_2546#1 CTATAATTTCAAAGTTGTGTTGCTTGGCGAAGGATGTGTTGGAAAAACTTCTGTTGCATT 60 ************ consensus_2546#0 ACGATATGTTGAAAACAAATTTAACGATAGACATATCAGCACATTGCAGGCTTCCTTTTT 72 consensus_2546#1 ACGATATGTTGAAAACAAATTTAACGATAGACATATCAGCACATTGCAGGCTTCCTTTTT 120 ************************************************************ consensus_2546#0 AAATAAAAAATTGACTATACATGAAAAGAAAGTAAACTTGGCAATATGGGATACTGCTGG 132 consensus_2546#1 AAATAAAAAATTGACTATACATGAAAAGAAAGTAAACTTGGCAATATGGGATACTGCTGG 180 ************************************************************ consensus_2546#0 TCAAGAAAAATTTCATGCATTGGGACCAATTTATTATAGAATGTCAAATGGTGCCATTAT 192 consensus_2546#1 TCAAGAAAAATTTCATGCATTGGGACCAATTTATTATAGAATGTCAAATGNNNCCATTAT 240 ************************************************** ******* consensus_2546#0 AGTTTATGATGTTACTGATTACGATACATTCTTAAGGGTTATAAATTGGGTTACAGAACT 252 consensus_2546#1 AGTTTATGATGTTACTGATTACGATACATTCTTAAGG-------------------AACT 281 ************************************* **** consensus_2546#0 TAGGAAAATGTTAGGCAGTGGAATTTGTTTAGCAATAGCTGGAAATAAAATAGATCTTGA 312 consensus_2546#1 TAGGAAAATGTTAGGCAGTGGAATTTGTTTAGCAATAGCTGGAAATAAAATAGATCTTGA 341 ************************************************************ consensus_2546#0 AAAGGATAGACGTGTTTATATCGAAGAAGCAGAAGAGTTTGCTAATAAAGCAGGAGCTAT 372 consensus_2546#1 AAAGGATAGAC------------------------------------------------- 352 *********** consensus_2546#0 GCATTTTCATATTTCTGCCAAATTAAATGAAAATATTGAAGAAATGTTTTTTCAATTAAC 432 consensus_2546#1 ------------------------------------------------------------ consensus_2546#0 AGTACGAATGATAGAACATGCAGATCTAATGGAACAAAAATCTACATTATCAAGAACAA 491 consensus_2546#1 ----------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |