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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2564#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 620 fasta sequence
[GAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTTTGTAATGTAGACCAAAGTCTTTTCCTCAAAATTGTTTAATAATTATTATCAGATTTATTTAGCTTTATTTAAATTGTTTAAAGGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATCGAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGACTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAACAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAATTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAAGTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTTCAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCATGGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACAAAGCTCCAGGATATTGGACCAATAAT]
[+] EMBL BI503085 [GAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTTTGTAATGTAGACCAAAGTCTTTTCCTCAAAATTGTTTAATAATTATTATCAGATTTATTTAGCTTTATTTAAATTGTTTAAAGGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATCGAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGACTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAACAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAATTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAAGTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTTCAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCATGGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACAAAGCTCCAGGATATTGGACCAATAAT]
consensusID : consensus_2564#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence
[TAATCGAAATGATTTAAAGTCAATAGAATGCAGGATAAAAATTTATCACTATTTCGAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTTTGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATCGAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGACTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAACAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAATTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAAGTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTTCAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCATGGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACA]
[+] EMBL BI506588 [TAATCGAAATGATTTAAAGTCAATAGAATGCAGGATAAAAATTTATCACTATTTCGAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTTTGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATCGAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGACTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAACAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAATTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAAGTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTTCAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCATGGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2564#0 GAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTT-TGTAATGTAGACCA 59
consensus_2564#1 -----------------------TAATCGAAATGATTTAAAGTCAATAGAATGCAGGATA 37
* ** *** **** * ** * * **** ** *
consensus_2564#0 AAGTCTTTTCCTCAAAATTGTTTAATAATTATTATCAGATTTATTTAGCTTTATTTAAAT 119
consensus_2564#1 AAAATTTATCACTATTTCGAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAAT 97
** ** ** * ** ** * * * ** * * ** * ***
consensus_2564#0 TGTTTAAAGGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATC 179
consensus_2564#1 TTTT-----GAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATC 152
* ** ***************************************************
consensus_2564#0 GAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGA 239
consensus_2564#1 GAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGA 212
************************************************************
consensus_2564#0 CTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAA 299
consensus_2564#1 CTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAA 272
************************************************************
consensus_2564#0 CAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAA 359
consensus_2564#1 CAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAA 332
************************************************************
consensus_2564#0 TTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAA 419
consensus_2564#1 TTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAA 392
************************************************************
consensus_2564#0 GTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTT 479
consensus_2564#1 GTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTT 452
************************************************************
consensus_2564#0 CAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCAT 539
consensus_2564#1 CAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCAT 512
************************************************************
consensus_2564#0 GGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACAAAGCT 599
consensus_2564#1 GGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACA----- 567
*******************************************************
consensus_2564#0 CCAGGATATTGGACCAATAAT 620
consensus_2564#1 ---------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |