These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2564#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 620 fasta sequence [GAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTTTGTAATGTAGACCAAAGTCTTTTCCTCAAAATTGTTTAATAATTATTATCAGATTTATTTAGCTTTATTTAAATTGTTTAAAGGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATCGAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGACTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAACAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAATTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAAGTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTTCAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCATGGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACAAAGCTCCAGGATATTGGACCAATAAT] [+] EMBL BI503085 [GAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTTTGTAATGTAGACCAAAGTCTTTTCCTCAAAATTGTTTAATAATTATTATCAGATTTATTTAGCTTTATTTAAATTGTTTAAAGGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATCGAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGACTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAACAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAATTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAAGTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTTCAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCATGGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACAAAGCTCCAGGATATTGGACCAATAAT] consensusID : consensus_2564#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence [TAATCGAAATGATTTAAAGTCAATAGAATGCAGGATAAAAATTTATCACTATTTCGAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTTTGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATCGAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGACTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAACAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAATTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAAGTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTTCAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCATGGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACA] [+] EMBL BI506588 [TAATCGAAATGATTTAAAGTCAATAGAATGCAGGATAAAAATTTATCACTATTTCGAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTTTGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATCGAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGACTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAACAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAATTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAAGTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTTCAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCATGGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2564#0 GAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAATTTT-TGTAATGTAGACCA 59 consensus_2564#1 -----------------------TAATCGAAATGATTTAAAGTCAATAGAATGCAGGATA 37 * ** *** **** * ** * * **** ** * consensus_2564#0 AAGTCTTTTCCTCAAAATTGTTTAATAATTATTATCAGATTTATTTAGCTTTATTTAAAT 119 consensus_2564#1 AAAATTTATCACTATTTCGAAAGAAAGATGGCAAAGAAAGTTGATGGAAGTGATGTGAAT 97 ** ** ** * ** ** * * * ** * * ** * *** consensus_2564#0 TGTTTAAAGGAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATC 179 consensus_2564#1 TTTT-----GAAGAGCAAAATACAGACCTGTATAAAATAGAGAAAATGGCGACCGACATC 152 * ** *************************************************** consensus_2564#0 GAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGA 239 consensus_2564#1 GAAGAATCAGACACTGATGATCATGAAAGGCCAGCTCCACCAAAACGGCAATGTACACGA 212 ************************************************************ consensus_2564#0 CTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAA 299 consensus_2564#1 CTCAAAGCTACCGAAACTATTTGGGATATGGAAAAAAGTTCAAATGGAAAAAAAATGGAA 272 ************************************************************ consensus_2564#0 CAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAA 359 consensus_2564#1 CAAATTCAAGAAACAGAAAATGTTGAATATGATGATGTAGAAAAACAAGCAAGGGAAAAA 332 ************************************************************ consensus_2564#0 TTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAA 419 consensus_2564#1 TTAAAAAGATGGCAAGCTTGTCAAGTTGCCAAGGGATATGTAGATAATACTATTAACAAA 392 ************************************************************ consensus_2564#0 GTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTT 479 consensus_2564#1 GTATTAGAAAATTACATTATGGGAACATCATCTTCTTATTCTCTAGAGGAATCCAGATTT 452 ************************************************************ consensus_2564#0 CAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCAT 539 consensus_2564#1 CAATTATTCAGAGGAAATGATATGGAGGATACTGCAGTCATGATGGCAATTCGTAATCAT 512 ************************************************************ consensus_2564#0 GGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACAAAGCT 599 consensus_2564#1 GGTTTAGTTCAATCTGCAGAACTTGTTTCTCAATCCAATGCTTTTTACAGTGACA----- 567 ******************************************************* consensus_2564#0 CCAGGATATTGGACCAATAAT 620 consensus_2564#1 --------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |