These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2613#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence [TTATTCTGGGGATGTTATGTTGATAGCATCGATAATGAGGGCAGAACAGTTTTGAGTGTGGCTGCTGCTCAAGGTGGCACAGATGTAGTAAAACAATTATTAGATCGAGGCTTAGACGAACAACATAGAGACAATTCAGGTTGGACACCCTTACATTATGCAGCATTTGAAGGTCACATTGATGTTTGCGAAGCACTACTAGAAGCAGGAGCCAAAATTGATGAAACTGACAATGATGGAAAAGGTGCACTAATGTTGGCTGCACAAGAAGGACATGCTGCATTAGTTGAAAGATTGTTAGAACAGCATGGAGCGCCAATCGATCAACATGCTCATGATGGAAAAACTGCTCTCAGACTTGCAGCTTTGGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCT] [+] EMBL BI515617 [TTATTCTGGGGATGTTATGTTGATAGCATCGATAATGAGGGCAGAACAGTTTTGAGTGTGGCTGCTGCTCAAGGTGGCACAGATGTAGTAAAACAATTATTAGATCGAGGCTTAGACGAACAACATAGAGACAATTCAGGTTGGACACCCTTACATTATGCAGCATTTGAAGGTCACATTGATGTTTGCGAAGCACTACTAGAAGCAGGAGCCAAAATTGATGAAACTGACAATGATGGAAAAGGTGCACTAATGTTGGCTGCACAAGAAGGACATGCTGCATTAGTTGAAAGATTGTTAGAACAGCATGGAGCGCCAATCGATCAACATGCTCATGATGGAAAAACTGCTCTCAGACTTGCAGCTTTGGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCT] consensusID : consensus_2613#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence [GGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCTTTATATTCTTGCTCTAGAGAACAGATTGGCAATGGCACGATTTTTGTTGGAGCATGCTCGAGCAGATGTAGAAAGCAGGGATTCAGAAGGACGAACTCCTCTGCATGTAAGTGCTTGGCAGGGACATGTCGAAATGGTAGCTTTGTTATTAACAGAAGGTGGTGCTAGTGTAAATGCTTGTGACAATGAGAATAGAACTCCTTTACATTCTGCAGCCTGGCAAGGTCATGCAGCCATTGTCAGATTGCTCCTTGAACATGGAGCAACTCCTGATCATACTTGTAATCAAGGAGCAACAGCTTT] [+] EMBL BI517104 [GGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCTTTATATTCTTGCTCTAGAGAACAGATTGGCAATGGCACGATTTTTGTTGGAGCATGCTCGAGCAGATGTAGAAAGCAGGGATTCAGAAGGACGAACTCCTCTGCATGTAAGTGCTTGGCAGGGACATGTCGAAATGGTAGCTTTGTTATTAACAGAAGGTGGTGCTAGTGTAAATGCTTGTGACAATGAGAATAGAACTCCTTTACATTCTGCAGCCTGGCAAGGTCATGCAGCCATTGTCAGATTGCTCCTTGAACATGGAGCAACTCCTGATCATACTTGTAATCAAGGAGCAACAGCTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2613#0 TTATTCTGGGGATGTTATGTTGATAGCATCGATAATGAGGGCAGAACAGTTTTGAGTGTG 60 consensus_2613#1 ------------------------------------------------------------ consensus_2613#0 GCTGCTGCTCAAGGTGGCACAGATGTAGTAAAACAATTATTAGATCGAGGCTTAGACGAA 120 consensus_2613#1 --------GGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTG 52 ***** *** ** * * ****** ** *** * consensus_2613#0 CAACATAGAGACAATTCAGGTTGGACACCCTTACATTATGCAGCATTTGAAGGTCACATT 180 consensus_2613#1 -AATGCAAAAGATGCTGATGGGAGAAGCACTCTTTATATTCTTGCTCTAGAGAACAGATT 111 ** * * * * * ** * ** *** * * * ** ** *** consensus_2613#0 GATGTTTGCGAAGCACTACTAGAAGCAGG----AGCCAAAATTGATGAAACTGACAATGA 236 consensus_2613#1 GGCAATGGCACGATTTTTGTTGGAGCATGCTCGAGCAGATGTAGAAAGCAGGGATTCAGA 171 * * ** * * * **** * *** * * ** * ** ** consensus_2613#0 TGGAAAAGGTGCACTAATGTTGGCTGCACAAGAAGGACATGCTGCATTAGTTGAAAGATT 296 consensus_2613#1 AGGACGAACTCCTCTGCATGTAAGTGCTTGGCAGGGACATGTCGAAATGGTAGCTTTGTT 231 *** * * * ** * *** * ******* * * * ** * ** consensus_2613#0 GTTAGAACAGCATGGAGCGCCAATCGATCAACATGCTCATGATGGAAAAACTGCTCTCAG 356 consensus_2613#1 ATTAACAGAAGGTGGTGCTAGTGTAAATGCTTGTGACAATGAGAATAGAACTCCTTTACA 291 *** * * *** ** * ** ** **** * **** ** * consensus_2613#0 ACTTGCAGCTTTGGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGA 416 consensus_2613#1 TTCTGCAGCCTGGCAAGGTCATGCAGCCATTGTCAGATTGCTCCTTGAACATGGAGCAAC 351 ****** * * ******** * * ****** * ** * * *** *** consensus_2613#0 TGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCT 452 consensus_2613#1 TCCTGATCATACTTGTAATCAAGGAGCAACAGCTTT 387 * ** * * * * ** ** ** * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |