These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2622#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 627 fasta sequence [TTTCTTAGGTATCTATTAGAAGGATTACACGAGGATGTGAACAGGGTGACGGTGAAACCGCAACCGATACACACGGATATTCCTGAAATGTACACAGACAGTCAGAAGGCAGTAGAAAGCTGGAAACGCTACTTACGTAGTGAAGATAGTATGATAGTGGACGTTTTCGTGGGTCAATTACGTTCGTCGTTACATTGCACTTCTTGTGACCATGTGTCAGTCACATTGGATCCTTTCTGGGATCTCAGTTTGCCAATACCGGCTAGAAGTGGTACAGTGAAGTTGAGCCAATGTTTGGAGCATTTCACGCGAGAAGAGGTGCTCGACGGTGATGAAAAACCGACTTGTTCCAAGTGTCAGATGAGGAGAAAGTGCACGAAAAGTTTCAGCATACAAAAGTTCCCGAAAATTCTTGTTATTCACTTAAAACGTTTCTCACCAATGGAACGATTCCGCAGCAAGCTAAATGTGATGGTAGATTTTCCATTGACAGGTTTGGATCTCAGTGCCTTTGCTGCGCCTAGAGTTCCGGGTTGTACGTACAATTTATACGGTGTCGCGAACCATTCGGGCACAACACACTCCGGTCATTACACAGCATATTGTAAGCATCCATACTCGGCAGAA] [+] EMBL BI508824 [TTTCTTAGGTATCTATTAGAAGGATTACACGAGGATGTGAACAGGGTGACGGTGAAACCGCAACCGATACACACGGATATTCCTGAAATGTACACAGACAGTCAGAAGGCAGTAGAAAGCTGGAAACGCTACTTACGTAGTGAAGATAGTATGATAGTGGACGTTTTCGTGGGTCAATTACGTTCGTCGTTACATTGCACTTCTTGTGACCATGTGTCAGTCACATTGGATCCTTTCTGGGATCTCAGTTTGCCAATACCGGCTAGAAGTGGTACAGTGAAGTTGAGCCAATGTTTGGAGCATTTCACGCGAGAAGAGGTGCTCGACGGTGATGAAAAACCGACTTGTTCCAAGTGTCAGATGAGGAGAAAGTGCACGAAAAGTTTCAGCATACAAAAGTTCCCGAAAATTCTTGTTATTCACTTAAAACGTTTCTCACCAATGGAACGATTCCGCAGCAAGCTAAATGTGATGGTAGATTTTCCATTGACAGGTTTGGATCTCAGTGCCTTTGCTGCGCCTAGAGTTCCGGGTTGTACGTACAATTTATACGGTGTCGCGAACCATTCGGGCACAACACACTCCGGTCATTACACAGCATATTGTAAGCATCCATACTCGGCAGAA] consensusID : consensus_2622#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 580 fasta sequence [TATTGTAAGCATCCATACTCGGCAGAATGGCACGAGTACAATGATAGCCGGGTGTCCGCGGTTCCAGCGCGATCGGTCGTTTCCAACGAAGCCTACGTACTGTTCTACGAGCAGCAGCCTCACAGCTCTCACTTGTAACCTTACGCCATGCTTAGAGTATGAAAAAAAAAAAAAAAAACGACCATCTTGCCTCTCAATACCTCAGTCCAGCATATAGTATAAAAAAAAGAAAACCGACAAAGAGAAAAGAAAAAATTAATAATAAGTGAAACTATACTTTATCGTGTGGTATTGAAAAGCGACTAAACATTGAACGTTGAGGTCGTTTTTATCGAGAATAAAAAACGGATCGTGTGTGTATTNNGTGACTATTGGCGATAATCATGTTTCCATTAAAGCCAAAATTTTGTTTTTCCTCGTGGATATTAGATATATCTCATTCGTGGTCCAGTCATTTTTACTTCGGCTTCTTTAGAAACCAGACACTTTAGTGCATTTTCCGATACGNAGGTTTATTACAAAATAGTCCTCTGAAAGATTAATAAGATGCTTAATATGAGCAAAACATTTTTCAGAAGTT] [+] EMBL BI508930 [TATTGTAAGCATCCATACTCGGCAGAATGGCACGAGTACAATGATAGCCGGGTGTCCGCGGTTCCAGCGCGATCGGTCGTTTCCAACGAAGCCTACGTACTGTTCTACGAGCAGCAGCCTCACAGCTCTCACTTGTAACCTTACGCCATGCTTAGAGTATGAAAAAAAAAAAAAAAAACGACCATCTTGCCTCTCAATACCTCAGTCCAGCATATAGTATAAAAAAAAGAAAACCGACAAAGAGAAAAGAAAAAATTAATAATAAGTGAAACTATACTTTATCGTGTGGTATTGAAAAGCGACTAAACATTGAACGTTGAGGTCGTTTTTATCGAGAATAAAAAACGGATCGTGTGTGTATTNNGTGACTATTGGCGATAATCATGTTTCCATTAAAGCCAAAATTTTGTTTTTCCTCGTGGATATTAGATATATCTCATTCGTGGTCCAGTCATTTTTACTTCGGCTTCTTTAGAAACCAGACACTTTAGTGCATTTTCCGATACGNAGGTTTATTACAAAATAGTCCTCTGAAAGATTAATAAGATGCTTAATATGAGCAAAACATTTTTCAGAAGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2622#0 TTTCTTAGGTATCTAT---TAGAAGGATTACACGAGGATGTGAACAGGGTGACGGTGAAA 57 consensus_2622#1 TATTGTAAGCATCCATACTCGGCAGAATGGCACGAGTACA-----ATGATAGCCGGGTGT 55 * * ** * *** ** * ** ** ****** * * * * * * * consensus_2622#0 CCGCAA--CCGATACACACGGATATTCCTGA-AATGTACACAGACAGTCAGAAGGCAGTA 114 consensus_2622#1 CCGCGGTTCCAGCGCGATCGGTCGTTTCCAACGAAGCCTACGTACTGTTCTACG--AGCA 113 **** ** * *** ** * * * * ** ** ** * * ** * consensus_2622#0 GAAAGCTGGAAACGCT-ACTTACGTAGTGAAGATAGTATGATAGTGGACGTTTTCGTGGG 173 consensus_2622#1 GCAGCCTCACAGCTCTCACTTGT------AACCTTACGCCATGCTTAGAGTATGAAAAAA 167 * * ** * * ** **** ** * ** * ** * consensus_2622#0 TCAATTACGTTCGTCGTTACATTGCACTTCTTGTGACCATGTGTCAGTCACATTGGATCC 233 consensus_2622#1 AAAAAAAAAAACGAC----CATCTTGCCTCT-----CAATACCTCAGTC-CAGCATATAG 217 ** * ** * *** * *** * ** ****** ** ** consensus_2622#0 TTTCTGGGATCTCAGTTTGCCAATACCGGCTAGAAGTGGTACAGTGAAGTTGAGCCAATG 293 consensus_2622#1 TATAAAAAAAAGAAAACCGACAAAGAGAAAAGAAAAAATTAATAATAAGTGAAACTATAC 277 * * * * * *** ** ** **** * * * consensus_2622#0 TTTGGAGCATTTCACGCGAGAAGAGGTGCTCGACGGTGA-TGAAAAACCGACTTGTTCCA 352 consensus_2622#1 TTTATCGTGTGGTATT---GAAAAGCGACTAAACATTGAACGTTGAGGTCGTTTTTATCG 334 *** * * * *** ** ** ** *** * * ** * * consensus_2622#0 AGTGTCAGATGAGGAGAAAGTGCACGAAAAGTTTCAGCATACAAAAGTTCCCGAAAATTC 412 consensus_2622#1 AGAATAAAAAACGGATCGTGTGTGTATTNNGTGACTATTGGCGATAATC-----ATGTTT 389 ** * * * *** *** ** * * * * * * ** consensus_2622#0 TTGTTATTCACTTAAAACGTTTCTCACCAATGGAACGATTCCGCAGCAAGCTAAATGTGA 472 consensus_2622#1 CCATTA--AAGCCAAAATTTTGTTTTTCCTCGTGGATATTAGATA-TATCTCATTCGTGG 446 *** * **** ** * * * *** * * * *** consensus_2622#0 T--GGTAGATTTTCCATTGACAGGTTTGGATCTCAGTGCCTTTGCTGCGCCTAGAGTTCC 530 consensus_2622#1 TCCAGTCATTTTTACTTCGGCTTCTTTAGAAACCAGACACTTTAGTGCATTT-----TCC 501 * ** **** * * * * *** ** *** **** *** * *** consensus_2622#0 GGGTTGTACGTACAATTTATA-CGGTGTCGCGAACCATTCGGGCACAACACACTCCGGTC 589 consensus_2622#1 GATACGNAGGTTTATTACAAAATAGTCCTCTGAAAGATT----AATAAGATGCTT-AATA 556 * * * ** * * * * ** *** *** * ** * ** * consensus_2622#0 ATTACACAGCATATTGTAAGCATCCATACTCGGCAGAA 627 consensus_2622#1 TGAGCAAAACATTTTTCAGAAGTT-------------- 580 ** * *** ** * * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |