These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2650#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 557 fasta sequence [CGAGGTAAATCGATTTTCAGCGAAACTCTCGGCCGTCCACGAATAATAGATCCCCTCCCCTCCCCCTTGAAAAAAAATTTCACGCAATTTCGTTCACGTGATTAAAATCGTTTCGCGGTTTCCCGTGGCGCGCGAGCGAAACGGAACAACGAGCAGGAACAAAGAGGGGGAGGGAGGGGGGAGAATAGATGGATTTTTTTTTTTCGAAGAACGAAAAAGCTACTTGTTGCGTGGCGCAGAACCAATGAAATTTCCGGTGAAAATTTAACGAATGTATTCGCGAGAACATATACACGTCGACGAATTGCTCCGATACCCGTACAGTTTCTAGAGTTTTTCGCAATTTTCGGGAAAAATTGGTGGCCGAAAAACGAAGAAAAAGAGAGAGAGAAAAAATCGATACCTCGTTTCGAGGAATCGACTCGACTCGAATCGATTATCTCGTCGGCGATCCCGGAAACCGCTCGACCGATCTTATTTCCTGGATAAGTCTCGCTTTGAAGGGGACAAGCGGACGGAGAAAAGGGAAGGAAATCGAGGGAATCGCGCGTTACACG] [+] EMBL BI502920 [CGAGGTAAATCGATTTTCAGCGAAACTCTCGGCCGTCCACGAATAATAGATCCCCTCCCCTCCCCCTTGAAAAAAAATTTCACGCAATTTCGTTCACGTGATTAAAATCGTTTCGCGGTTTCCCGTGGCGCGCGAGCGAAACGGAACAACGAGCAGGAACAAAGAGGGGGAGGGAGGGGGGAGAATAGATGGATTTTTTTTTTTCGAAGAACGAAAAAGCTACTTGTTGCGTGGCGCAGAACCAATGAAATTTCCGGTGAAAATTTAACGAATGTATTCGCGAGAACATATACACGTCGACGAATTGCTCCGATACCCGTACAGTTTCTAGAGTTTTTCGCAATTTTCGGGAAAAATTGGTGGCCGAAAAACGAAGAAAAAGAGAGAGAGAAAAAATCGATACCTCGTTTCGAGGAATCGACTCGACTCGAATCGATTATCTCGTCGGCGATCCCGGAAACCGCTCGACCGATCTTATTTCCTGGATAAGTCTCGCTTTGAAGGGGACAAGCGGACGGAGAAAAGGGAAGGAAATCGAGGGAATCGCGCGTTACACG] consensusID : consensus_2650#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence [GAGAAACATTCAATGGAGAGAGCTAACGTAAAACGGATTCTAGAAGAACAAAAGCTATTTATTATGAGATGAATTAACCGTTTTTCAATAATCTAAATATATTTCACGGACAAAAGGCGAGCATCGTTTCGTTTCTTCGTCGCGAATCCGAAAGAAAGAGAGAGAGAGAAATATCTTAGTCTTTTAATTAATATAAAACGGATAATAATAAGAATCGTAGAAAAAGATCGTATTATCCCCGGATCTCTCGACAATACCGTTAATTTATCATGCGAAAAAATAAGCCAGATGCTGCAGTAATCGGCACGAATATTCCACCTCGACCTCGACTGGGTGCCCGAGGTAAATCGATTTTCAGCGAAACTCTCGGCCGTCCACGAATAATAGATCCCCTCCCCTCCTCTCCCCCTTGAAAAAAAAAATCATAGTTAACAAGGCACTGCCACACACAGGACCAACAAAGAAAAGTCGAGAAAGTGAG] [+] EMBL BI503556 [GAGAAACATTCAATGGAGAGAGCTAACGTAAAACGGATTCTAGAAGAACAAAAGCTATTTATTATGAGATGAATTAACCGTTTTTCAATAATCTAAATATATTTCACGGACAAAAGGCGAGCATCGTTTCGTTTCTTCGTCGCGAATCCGAAAGAAAGAGAGAGAGAGAAATATCTTAGTCTTTTAATTAATATAAAACGGATAATAATAAGAATCGTAGAAAAAGATCGTATTATCCCCGGATCTCTCGACAATACCGTTAATTTATCATGCGAAAAAATAAGCCAGATGCTGCAGTAATCGGCACGAATATTCCACCTCGACCTCGACTGGGTGCCCGAGGTAAATCGATTTTCAGCGAAACTCTCGGCCGTCCACGAATAATAGATCCCCTCCCCTCCTCTCCCCCTTGAAAAAAAAAATCATAGTTAACAAGGCACTGCCACACACAGGACCAACAAAGAAAAGTCGAGAAAGTGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2650#0 CGAGGTAAATCGATTTTCAGCGAAACTCTCGGCCGTCCA-CGAATAATAGATCCCCTCCC 59 consensus_2650#1 -------GAGAAACATTCAATGGAGAGAGCTAACGTAAAACGGATTCTAGAAGAACAAAA 53 * * **** * * * *** * ** ** **** * consensus_2650#0 -CTCCCCCTTGAAAAAAAATTTCACGCAATTTCGTTCACGTGATTAAAATCGTTTCGCGG 118 consensus_2650#1 GCTATTTATTATGAGATGAATTAACCGTTTTTCAATAAT----CTAAATATATTTCACGG 109 ** ** * * * ** ** **** * * **** **** *** consensus_2650#0 TTTCCCGTGGCGCGCGAGCGAAACGGAACAACGAGCAGGAACAAAGAGGGGGAGGGAGGG 178 consensus_2650#1 --ACAAAAGGCGAGC-ATCGTTTCGTTTCTTCGTCGCGAATCCGAAAGAAAGAGAGAGAG 166 * **** ** * ** ** * ** * * * * ** *** *** * consensus_2650#0 GGGAGAATAGATGGATTTTTTTTTTTCGAAGAACGAAAAAGCTACTTGTTGCGTGGCGCA 238 consensus_2650#1 AGAAATATCT-TAGTCTTTTAATTAATATAAAACGGATAA-TAATAAGAATCGTAGAAAA 224 * * ** * * **** ** * **** * ** * * *** * * consensus_2650#0 GAACCAATGAAATTTCCGGTGAAAATTTAACGAATGTATTCGCGAGAACATATACACGTC 298 consensus_2650#1 AGATCG-TATTATCCCCGG-----ATCTCTCGACAATAC---CGTTAATTTAT-CATGCG 274 * * * ** **** ** * *** ** ** ** *** ** * consensus_2650#0 GACGAATTGCTCCGATACCCGTACAGTTTCTA-GAGTTTTTCGCAATTTTCGGGAAAAAT 357 consensus_2650#1 AAAAAATAAGCCAGATGCTGCAGTAATCGGCACGAATATTCCAC----CTCGACCTCGAC 330 * *** * *** * * * * ** * ** * * *** * consensus_2650#0 TGGTGGCCGAAAAACGAAGAAAAAGAGAGAGAGAAAAAATCGATACCTCGTTTCGAGGAA 417 consensus_2650#1 TGGGTGCCCGAG---GTAAATCGATTTTCAGCGAAACTCTCGGCCGTCCA---CGAATAA 384 *** *** * * * * * ** **** *** * *** ** consensus_2650#0 TCGACTCGACTCGAATCGATTATCTCGTCGGCGATCCCGGAAACCGCTCGACCGATCTTA 477 consensus_2650#1 TAGA-TCCCCTC----CCCTCCTCTCCCC------CTTGAAAA------AAAAAATCATA 427 * ** ** *** * * **** * * * *** * *** ** consensus_2650#0 TTTCCTGGATAAGTCTCGCTTTGAAGGGGACAAGCGGACGGAGAAAAGGGAAGGAAATCG 537 consensus_2650#1 GT---TAACAAGGCACTGCCACACACAGGACCA----ACAAAGAAAAGTCGAGAAAGT-G 479 * * * * ** * **** * ** ******* ** ** * * consensus_2650#0 AGGGAATCGCGCGTTACACG 557 consensus_2650#1 AG------------------ 481 ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |