These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2658#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 459 fasta sequence [GAGTTCTGTGAGAAGGAAATTAGGATGGTGTGATTGTTTGGAGAAGAGGCGAGGAGATTTGAAGAAAGTTTTGGATGCATCGGGACGAAGAGTTTTCAATCCACAAGGATGGAGGAGGAACGAAGATGGCAACGAAGAAGGATTTTAATATATACGAGTCAAAGGTCGAATCGAAGGTTGGAAAGAGACGGCGAGGAAATCTCTCTTCCCTTTTTCTGCCTAACTCGAAGGGAAGGGTCGTCGCGCCCTCTTCCTCTCGGATCCCCGATCAACGCTCGATTCTCTGTTCCATCGAAGCTTTTTCTTTATTATATTTAAGCAAAAGACGAAAAGAGACTGATTTGTGTACAGGGCAAAGCATTGTGCGTGCGTGGCCATGGAAAACGAGGGGGGAAGAAGCGTTCGATCCTCGTCTCTTTTAATTCACTTTGGTCGCACAATATCCTTGTCACGAGCCAA] [+] EMBL BI512545 [GAGTTCTGTGAGAAGGAAATTAGGATGGTGTGATTGTTTGGAGAAGAGGCGAGGAGATTTGAAGAAAGTTTTGGATGCATCGGGACGAAGAGTTTTCAATCCACAAGGATGGAGGAGGAACGAAGATGGCAACGAAGAAGGATTTTAATATATACGAGTCAAAGGTCGAATCGAAGGTTGGAAAGAGACGGCGAGGAAATCTCTCTTCCCTTTTTCTGCCTAACTCGAAGGGAAGGGTCGTCGCGCCCTCTTCCTCTCGGATCCCCGATCAACGCTCGATTCTCTGTTCCATCGAAGCTTTTTCTTTATTATATTTAAGCAAAAGACGAAAAGAGACTGATTTGTGTACAGGGCAAAGCATTGTGCGTGCGTGGCCATGGAAAACGAGGGGGGAAGAAGCGTTCGATCCTCGTCTCTTTTAATTCACTTTGGTCGCACAATATCCTTGTCACGAGCCAA] consensusID : consensus_2658#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 377 fasta sequence [TCTGTCTCCAATCTTCCATTCCTCCGTGCGACACCGGGCGAACGAGACGGATGGGCAGATGAGGCGCAGGCGAGCGTGTGCGAAAAGCGTGTGGCGGGAAGAGAGACGGTGAGGGGGAGGGGGAAGGTCGAGAGGAAGAAGCGGCTACACAGAGACTTGCAGATTTCGAAAATTTCGAACAAATTATCGAATCCTCCGCTCGTGATGGTTCGAACGGATGGATAGAGGAGGATAATCGAACAATGAAAGATAAAGAAACTAAGGATAAGAGAGAGAAAGAGAAGAGACAAAGAAGGAGGGGAATCGTTCCTTCAACTTTTGATTAAAGGGAGCGTCATCCGTAGCTTCGAGTTCTGTGAGAAGGAAATTAGGATGGT] [+] EMBL BI511396 [TCTGTCTCCAATCTTCCATTCCTCCGTGCGACACCGGGCGAACGAGACGGATGGGCAGATGAGGCGCAGGCGAGCGTGTGCGAAAAGCGTGTGGCGGGAAGAGAGACGGTGAGGGGGAGGGGGAAGGTCGAGAGGAAGAAGCGGCTACACAGAGACTTGCAGATTTCGAAAATTTCGAACAAATTATCGAATCCTCCGCTCGTGATGGTTCGAACGGATGGATAGAGGAGGATAATCGAACAATGAAAGATAAAGAAACTAAGGATAAGAGAGAGAAAGAGAAGAGACAAAGAAGGAGGGGAATCGTTCCTTCAACTTTTGATTAAAGGGAGCGTCATCCGTAGCTTCGAGTTCTGTGAGAAGGAAATTAGGATGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2658#0 GAGTTCTGTGAGAAGGAAATTAGGATGGTGTGATTGTTTGGAGAAGAGGCGAGGAGATTT 60 consensus_2658#1 ---------------TCTGTCTCCAATCTTCCATTCCTCCGTGCGACACCGGGCGAACGA 45 * * * *** * * * ** * * consensus_2658#0 GAAGAAAGTTTTGGATGCATCGGGACGAAGAGTTTTC--AATCCACAAGGATGGAGGAGG 118 consensus_2658#1 GACGGATGGGC-AGATGAGGCGCAGGCGAGCGTGTGCGAAAAGCGTGTGGCGGGAAGAGA 104 ** * * * **** ** ** ** * * ** * ** *** *** consensus_2658#0 AACGAAGATGGCAACGAAGAAGGATTTTAATATATACGAGTCAAAGGTCGAATCGAAGGT 178 consensus_2658#1 GACGGTGAGGGGGAGGGGGAAGGTCGAGAGGAAGAAGCGGCTACACAGAGACTTGCAGAT 164 *** ** ** * * ***** * * * * * * ** * * ** * consensus_2658#0 TGGAAAGAGACGGCGAGGAAATCTCTCTTCCCTTTTTCTGCCTAACTCGAAGGGAAGGGT 238 consensus_2658#1 TTCGAAAATTTCG-AACAAATTATCGAATCCTCCGCTCGTGATGGTTCGAACGGATGGAT 223 * ** * * * ** * ** *** ** * ***** *** ** * consensus_2658#0 CGTCGCGCCCTCTTCCTCTCGGATCCCCGATCAACGCTCGATTCTCTGTTCCATCGAAGC 298 consensus_2658#1 AGAGG--------------AGGATAATCGAACAATGAAAGATAAAGAA----ACTAAGGA 265 * * **** *** *** * *** * * * consensus_2658#0 TTTTTCTTTATTATATTTAAGCAAAAGACGAAAAGAGACTGATTTGTGTACA---GGGCA 355 consensus_2658#1 TAAGAGAGAGAAAGAGAAGAGACAAAGAAGGAGGGGAATCGTTCCTTCAACTTTTGATTA 325 * * * ** ***** * * * * * * * ** * * consensus_2658#0 AAGCATTGTGCGTGCGTGGCCATGGAAAACGAGGGGGGAAGAAGCGTTCGATCCTCGTCT 415 consensus_2658#1 AAGGGAGCGTCATCCGTAGCTTCGAGTTCTGTGAGAAGGAAATTAGGATGGT-------- 377 *** * * *** ** * * * * * * * * * * consensus_2658#0 CTTTTAATTCACTTTGGTCGCACAATATCCTTGTCACGAGCCAA 459 consensus_2658#1 -------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |