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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2757#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence
[CGTGATCTCTCAAGAGGATCCTAATTGGTGGCAAGCGTATCGGGAGGGTGAAGAGGATCAAACACTGGCTGGTTTGATACCAAGCAAAGCCTTCCAGCATCAGCGAGAATCGATGAAGCAAACTATCGCCGGTGATAAATCGACCGTGCGCGGTTCCAAGAAATCTAGCACGTTGTTGTGCGCTAGAAAGAATCCAAAGAAGAAGAAACGGAACAAGTTTGGGGCGAACTACAACGACGACGGGTATCCGCATTACGCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTACTTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGATAGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCGTTTCGCTGCTGCTATTCCTCGTAAGCTCTCCACTAGTATTCGTATCGTTTGTCAATTCAATCCTCTACTCGATCTTGGAATCTACGAGTAAAAATTATCTAAAATCTATTCCAGACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACAGGATTACCAT]
[+] EMBL BI506998 [CGTGATCTCTCAAGAGGATCCTAATTGGTGGCAAGCGTATCGGGAGGGTGAAGAGGATCAAACACTGGCTGGTTTGATACCAAGCAAAGCCTTCCAGCATCAGCGAGAATCGATGAAGCAAACTATCGCCGGTGATAAATCGACCGTGCGCGGTTCCAAGAAATCTAGCACGTTGTTGTGCGCTAGAAAGAATCCAAAGAAGAAGAAACGGAACAAGTTTGGGGCGAACTACAACGACGACGGGTATCCGCATTACGCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTACTTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGATAGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCGTTTCGCTGCTGCTATTCCTCGTAAGCTCTCCACTAGTATTCGTATCGTTTGTCAATTCAATCCTCTACTCGATCTTGGAATCTACGAGTAAAAATTATCTAAAATCTATTCCAGACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACAGGATTACCAT]
consensusID : consensus_2757#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence
[GCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTACTTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGATAGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCGTTTCGCTGCTGCTATTCCTCACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACAGGATTACCATTTCATCTCTCGTTCTCAATTCGAATCCGATATACTTTGTCGAAAGTTCGTCGAGCACGGAGAATACGAGAAAGCCTATTACGGCACCTCCGTCGAAGCTATACGATCCGTAGTAAACTCTGGTAAAATTTGTGTTCTTAATCTGCATCCGCAGAGCTTGAAGATATTGAGAAATTCGGACTTGAAACCGTACGTGGTATTCGTCGCCCCGCCAAGTTTGGAGAAACTTCGCCAGAAGAGGATC]
[+] EMBL BI502718 [GCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTACTTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGATAGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCGTTTCGCTGCTGCTATTCCTCACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACAGGATTACCATTTCATCTCTCGTTCTCAATTCGAATCCGATATACTTTGTCGAAAGTTCGTCGAGCACGGAGAATACGAGAAAGCCTATTACGGCACCTCCGTCGAAGCTATACGATCCGTAGTAAACTCTGGTAAAATTTGTGTTCTTAATCTGCATCCGCAGAGCTTGAAGATATTGAGAAATTCGGACTTGAAACCGTACGTGGTATTCGTCGCCCCGCCAAGTTTGGAGAAACTTCGCCAGAAGAGGATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2757#0 CGTGATCTCTCAAGAGGATCCTAATTGGTGGCAAGCGTATCGGGAGGGTGAAGAGGATCA 60
consensus_2757#1 ------------------------------------------------------------
consensus_2757#0 AACACTGGCTGGTTTGATACCAAGCAAAGCCTTCCAGCATCAGCGAGAATCGATGAAGCA 120
consensus_2757#1 ------------------------------------------------------------
consensus_2757#0 AACTATCGCCGGTGATAAATCGACCGTGCGCGGTTCCAAGAAATCTAGCACGTTGTTGTG 180
consensus_2757#1 ------------------------------------------------------------
consensus_2757#0 CGCTAGAAAGAATCCAAAGAAGAAGAAACGGAACAAGTTTGGGGCGAACTACAACGACGA 240
consensus_2757#1 ------------------------------------------------------------
consensus_2757#0 CGGGTATCCGCATTACGCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTAC 300
consensus_2757#1 ----------------GCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTAC 44
********************************************
consensus_2757#0 TTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGAT 360
consensus_2757#1 TTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGAT 104
************************************************************
consensus_2757#0 AGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCG 420
consensus_2757#1 AGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCG 164
************************************************************
consensus_2757#0 TTTCGCTGCTGCTATTCCTCGTA--AGCTCTCCACTA--GTATTCGTA--TCGTTTGTCA 474
consensus_2757#1 TTTCGCTGCTGCTATTCCTCACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACA 224
******************** * ** **** * * * *** * * * * **
consensus_2757#0 --ATT--CAATCCTCTACTCGATCTTGGAATCTA-CGAGTAAAAATTATCTAAAATCTAT 529
consensus_2757#1 GGATTACCATTTCATCTCTCGTTCTCAATTCGAATCCGATATACTTTGTCGAAAGTTCGT 284
*** ** * * **** *** * * ** * ** ** *** * *
consensus_2757#0 TCCAGACACGAGTCGTCCAAGAAAGG--ACTCGGAAGTGGACGGACAGGAT-TACCAT-- 584
consensus_2757#1 --CGAGCACGGAGAATACGAGAAAGCCTATTACGGCACCTCCGTCGAAGCTATACGATCC 342
* **** * * ****** * * * ** * * * *** **
consensus_2757#0 ------------------------------------------------------------
consensus_2757#1 GTAGTAAACTCTGGTAAAATTTGTGTTCTTAATCTGCATCCGCAGAGCTTGAAGATATTG 402
consensus_2757#0 ------------------------------------------------------------
consensus_2757#1 AGAAATTCGGACTTGAAACCGTACGTGGTATTCGTCGCCCCGCCAAGTTTGGAGAAACTT 462
consensus_2757#0 ---------------
consensus_2757#1 CGCCAGAAGAGGATC 477
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |