These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2765#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 418 fasta sequence [TGCCCTCTAAAAATATAAATTCCGTGCCGGCACTGCCCAGCAGATTTTTCCTTCGTCTGAAGAACCAGCTACTTTATCTACATTAAATGAAGGTGAACTACGTGCACTATTGGATGAAGCTATAACTTATAAGTGTCCAAAAGATCGTGAAGGAAAATCAAGTCTTTTTAAAGAGTTACTTCAAGAAGCAGAAGCTGATGAAACTGAGGAAGGTTGTAGAATAATAACTAATTCACGTTGTTTACCTGGATCAAATCGTAGAAGGCATAAAAGAGATTCTGTATCTGAGAGATTAACACATGGAGGCTCATTACAAAATTTAGCACAACCTATTACTTCAGAATTTGATAGTAGTTTTGCTTATTTAACATCTGGATCTAGCTATACTTACGGAGGAAACAGGAGAAAAAATAAAAAA] [+] EMBL BI515681 [TGCCCTCTAAAAATATAAATTCCGTGCCGGCACTGCCCAGCAGATTTTTCCTTCGTCTGAAGAACCAGCTACTTTATCTACATTAAATGAAGGTGAACTACGTGCACTATTGGATGAAGCTATAACTTATAAGTGTCCAAAAGATCGTGAAGGAAAATCAAGTCTTTTTAAAGAGTTACTTCAAGAAGCAGAAGCTGATGAAACTGAGGAAGGTTGTAGAATAATAACTAATTCACGTTGTTTACCTGGATCAAATCGTAGAAGGCATAAAAGAGATTCTGTATCTGAGAGATTAACACATGGAGGCTCATTACAAAATTTAGCACAACCTATTACTTCAGAATTTGATAGTAGTTTTGCTTATTTAACATCTGGATCTAGCTATACTTACGGAGGAAACAGGAGAAAAAATAAAAAA] consensusID : consensus_2765#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence [ATAACGCTGTCAGTTTCAGTCAAAATGGCCCCAGGGCCAGAACATCGCCAAGAACCAATAGCACCTGACAAAAGTGCTGAAAATAACAATAGTGAGATCTCTAATGAAAGAGATAATATCGAAAATTCAGTGATAGTTGTTGAGACTGTTAGTAACCAGAGTTCGAATACAGAATGTGCTTCAACGAACACTGACATCAATTCAGATTCGACAACCCAAAGTGTATCAACTTGCATTACTTCTGACAATAAACAGGAAGAACCAGCTACTTTATCTACATTAAATGAAGNNNAACTACGTGCACTATTGGATGAAGCTATAACTTATAAGTGTCCAAAAGATCGTGAAGGAAAAT] [+] EMBL BI515378 [ATAACGCTGTCAGTTTCAGTCAAAATGGCCCCAGGGCCAGAACATCGCCAAGAACCAATAGCACCTGACAAAAGTGCTGAAAATAACAATAGTGAGATCTCTAATGAAAGAGATAATATCGAAAATTCAGTGATAGTTGTTGAGACTGTTAGTAACCAGAGTTCGAATACAGAATGTGCTTCAACGAACACTGACATCAATTCAGATTCGACAACCCAAAGTGTATCAACTTGCATTACTTCTGACAATAAACAGGAAGAACCAGCTACTTTATCTACATTAAATGAAGNNNAACTACGTGCACTATTGGATGAAGCTATAACTTATAAGTGTCCAAAAGATCGTGAAGGAAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2765#0 TGCCCTCTAAAAATATAAATTCCGTGCCGGCACTGCCCAGCAGATTTTTCCTTCGTCTGA 60 consensus_2765#1 -------------------------------------------ATAACGCTGTCAGTTTC 17 ** * ** * consensus_2765#0 AGAACCAGCTACTTTATCTACATTAAATGAAGGTGAACTACGTGCACTATTGGATGAAGC 120 consensus_2765#1 AGTCAAAATGGCCCCAGGGCCAGAACATCGCCAAGAACCAATAGCACCTGACAAAAGTGC 77 ** * * * ** * ** **** * **** * ** consensus_2765#0 TATAACTTATAAGTGTCCAAAAGATCGTGAAGGAAAATCAAGTCTTTTTAAAGAGTTACT 180 consensus_2765#1 TGAAAATAACAATAGT----GAGATCTCTAATGAAAG--AGATAATATCGAAAATTCAGT 131 * ** * * ** ** ***** ** **** * * * * ** * * * * consensus_2765#0 TCAAGAAGCAGAAGCTGATGAAACTGAGGAAGGTTGTAGAATAATAACTAATTCACGTTG 240 consensus_2765#1 GATAGTTGTTGAGACTGTT---AGTAACCAGAGTTCGAATACAGAATGTGCTTCAA--CG 186 ** * ** *** * * * * * *** * * * * * **** * consensus_2765#0 TTTACCTGGATCAAATCGTAGAAGGCATAAAAGAGATTCTGTATCTGAGAGATTAACACA 300 consensus_2765#1 AACACTGACATCAATTCAGATTCGACAACCCAAAG----TGTATCAACTTGCATTACTTC 242 ** ***** ** * * ** * ** ****** * * ** consensus_2765#0 TGGAGGCTCATTACAAAATTTAGCACAACCTATTACTTCAGAATTTGATAGTAGTTTTGC 360 consensus_2765#1 TGA-----CAATA-AACAGGAAGAACCAGCTACTTTATCTACATTAAAT-GAAGNNNAAC 295 ** ** ** ** * ** ** * *** * ** *** ** * ** * consensus_2765#0 TTATTTAACATCTGGATCTAGCTATACTTACGGAGGAAACAGGAGAAAAAATAAAAAA-- 418 consensus_2765#1 TACGTGCACTATTGGATGAAGCTATAACTTATAAGTGTCCAAAAGATCGTGAAGGAAAAT 355 * * ** ***** ******* * ** ** *** * *** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |