These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2793#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 524 fasta sequence [GAATTTATTTATATATAAAGGATAAAGATAAAAGAAACTTAGAAAGAAAATTTTTCATACATACGTGTGTTGAAATAATTTAAAAAGATGACCACGGATATAAGAAGCAGGGGCTGGATAACATTCTACCAAATCTAAATATTCAAGTGCTGGCTCCCAACTAGGTGGATAACAAGCTTCAAATATATATGGATTATAAAGATTGCCTTCTGCTGACATTACACCATTAACACCAGTTTCTTCTATACATTTTTGAATATCTTGTAGACATTGTATATTACCATTCGCAAATACTGGAATTGTGACAGCTTGTCTTACAGCTTTAATGTGATCCCAAGATGCAACACCAGTCAATGGACCTTTCTGTTCTCGAGTTCGTCCATGCACAGTAAGTAATTGTGCACCAGCAGCTTCAAGCATTTGTGCATATTTCACAGTTTTATCAATTTCTGCAAATACTCGAAGCTTGCAAGTTACTGGTACATGAAGTTTTTTACTCAAAGTACTAACGATTTGTTGAAGTA] [+] EMBL BI513439 [GAATTTATTTATATATAAAGGATAAAGATAAAAGAAACTTAGAAAGAAAATTTTTCATACATACGTGTGTTGAAATAATTTAAAAAGATGACCACGGATATAAGAAGCAGGGGCTGGATAACATTCTACCAAATCTAAATATTCAAGTGCTGGCTCCCAACTAGGTGGATAACAAGCTTCAAATATATATGGATTATAAAGATTGCCTTCTGCTGACATTACACCATTAACACCAGTTTCTTCTATACATTTTTGAATATCTTGTAGACATTGTATATTACCATTCGCAAATACTGGAATTGTGACAGCTTGTCTTACAGCTTTAATGTGATCCCAAGATGCAACACCAGTCAATGGACCTTTCTGTTCTCGAGTTCGTCCATGCACAGTAAGTAATTGTGCACCAGCAGCTTCAAGCATTTGTGCATATTTCACAGTTTTATCAATTTCTGCAAATACTCGAAGCTTGCAAGTTACTGGTACATGAAGTTTTTTACTCAAAGTACTAACGATTTGTTGAAGTA] consensusID : consensus_2793#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 414 fasta sequence [AATATTTAGATTTGGTAGAATGTTATCCAGCCCCTGCTTCTTATATCCGTGGTCATCTTTTTAAATTATTTCAACACACAAAATAAAGAAGAAAGAGAAAATTTGGCTCGAAACTCTACTATGGAATCTTTCCGAAATGTCGTTTACACTTTGAGAGATCGATATCTACCTTATCACGAAGGACGTTTAATATGGCATGAAGAAACATCTGATTATAATTTAAAATTACCTCCATGGTTGTGCCAACCATATGTACGTCATCTTCCAGAAGAGAATATACAAAAACTAGAAATCGAAAAAATCGAAAAGCAGAATGAATCAACTAAAAGAAAATTCAGAGACGAAGAAGGAAATGAAATATCACGAAAACATTTGAAAAAACTTAAACGTATAGCGCGCCGACCAAACAAATCA] [+] EMBL BI511290 [AATATTTAGATTTGGTAGAATGTTATCCAGCCCCTGCTTCTTATATCCGTGGTCATCTTTTTAAATTATTTCAACACACAAAATAAAGAAGAAAGAGAAAATTTGGCTCGAAACTCTACTATGGAATCTTTCCGAAATGTCGTTTACACTTTGAGAGATCGATATCTACCTTATCACGAAGGACGTTTAATATGGCATGAAGAAACATCTGATTATAATTTAAAATTACCTCCATGGTTGTGCCAACCATATGTACGTCATCTTCCAGAAGAGAATATACAAAAACTAGAAATCGAAAAAATCGAAAAGCAGAATGAATCAACTAAAAGAAAATTCAGAGACGAAGAAGGAAATGAAATATCACGAAAACATTTGAAAAAACTTAAACGTATAGCGCGCCGACCAAACAAATCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2793#0 GAATTTATTTATATATAAAGGATAAAGATAAAAGAAACTTAGAAAGAAAATTTTTCATAC 60 consensus_2793#1 ----------------AATATTTAGATTTGGTAGAATGTTATCCAGCCCCTGCTTCTTAT 44 ** ** * * **** *** ** * *** ** consensus_2793#0 ATACGTG------TGTTGAAATAATTTAAAAAGATGACCACGGATATAAGAAGCAGG--- 111 consensus_2793#1 ATCCGTGGTCATCTTTTTAAATTATTTCAACACACAAAATAAAGAAGAAAGAGAAAATTT 104 ** **** * ** **** **** ** * * * * ** ** * consensus_2793#0 GGCTGGATAACATTCTACCAAATCTAAATATTCAAGTGCTGGCTCCCAACTAGGTGGATA 171 consensus_2793#1 GGCTCGAAACTCTACTATGGAATCT---TTCCGAAATGTCGTTTACACTTTGAGAGATCG 161 **** ** * * *** ***** * ** ** * * * * * * consensus_2793#0 ACAAGCTTCAAATATATATGGATTATAAAGATTGCCTTCTGCTGACATTACACCATTAAC 231 consensus_2793#1 ATATCTACCTTATCACGAAGGACGTTTAATATGGCATGAAGA-AACATCTGATTATAATT 220 * * * ** * *** * ** ** ** * * **** * ** * consensus_2793#0 ACCAGTTTCTTCTATACATTTTTGAATATCTTGTAG---ACATTGTATATTACCATTCGC 288 consensus_2793#1 TAAAATTACCTCCATGGTTGTGCCAACCATATGTACGTCATCTTCCAGAAGAGAATATAC 280 * ** * ** ** * * ** **** * ** * * * ** * consensus_2793#0 AAATACTGGAATTGTGACAGCTTGTCTTACAGCTTTAAT--GTGATCCCAAGATGCAACA 346 consensus_2793#1 AAAAACTAGAAATCGAAAAAATCGAAAAGCAGAATGAATCAACTAAAAGAAAATTCAGAG 340 *** *** *** * * * * * *** * *** * ** ** ** consensus_2793#0 CCAGTCAATGGACCTTTCTGTTCTCGAGTTCGTCCATGCACAGTAAGTA-ATTGTGCACC 405 consensus_2793#1 ACGAAGAAGGAAATGAAATATCACGAAAACATTTGAAAAAACTTAAACGTATAGCGCGCC 400 * ** * * * * * * * * *** ** * ** ** consensus_2793#0 AGCAGCTTCAAGCATTTGTGCATATTTCACAGTTTTATCAATTTCTGCAAATACTCGAAG 465 consensus_2793#1 GACCAAACAAATCA---------------------------------------------- 414 * ** ** consensus_2793#0 CTTGCAAGTTACTGGTACATGAAGTTTTTTACTCAAAGTACTAACGATTTGTTGAAGTA 524 consensus_2793#1 ----------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |