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Apis mellifera
cluster # 281 cluster # 281       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_281#0 length = 1343 sequences # 5  

consensusID : consensus_281#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1343
fasta sequence
                              [TTTTTTTCTCTCTCTCTTATAAATCCTTTCATCGATCGGAATCTCTCCATCGAGGCAGTCGAGCAATGCGAGTAGAAACGAATAAGAAAGTAATGTGTTCCACTGTCTCGATGGGGGGGGGAAGAATATATTAGTAAGAAAGTGGTGAAGAAAGACACGTTCCTTCTACGAAGACGACGATTTTACACGTGTGATAATTGTTTGTACTTGTGCGTGGAGCACGCGTTACGGACCAAAAACGATCGTCATTGTTACGACCCAGCAGCATCCGTTATACTTACTCGTTCTGTATAATTATTGTGATCTTGGTGCAATATTTGCATAATATTTTTGTCCCTTGTCCCCGAATTGACCACGAAGAGTCGAAAATACAAAAAACGATTATACGACGAGAGACAGAGAACAGAAGGAGAAAAAGGGATCCACGAGAGGACGTGCGAATAAAACGTACGGTTCGTTGGATCCGTTTCCGATTTTCGATCATTTTAGCCCGACATTCCATGTAACATTACCGCGTTTGTAATTTATACGATACGTATTGTAGATAACCGTTTCGTTGACAATTGATTAGTTTTCCTCCCTCCCTCCAGTTTTTTTTTTTTTCGTTTATCTCTGAAAAAAAAGAAAAAGAAAAAGAAAAAAAAACGAACGAATGAGCGATGAGCGTATGAGAGCGAGAGCGCGTGCGGACGAGAGAGAGATGGATTAATGTCACATGGAATGCGCGAGAAAATAATGTTTGACGATTAAATTATATTTACGAATTATTAACGAATATAACGAATCGCTTGTATTGTGTGCACACAGAAAAATAACCGCGGAAAGGATGAAAGGAAGAAGGCATAATATTAATATAACGTACCGGTAGAACCTTTTCAGGGAGTATCCGTGACTTTTACGTTAGTACGTAACGAAGAAAATAAATATATACATAACTTGTTCGACTTTATTTTTTATACGTTGCGTTTATAACTCGAGGGAGAGTAGGGAAAGAGCGGTTCGATTATTCGAAATCGAGAACGAAACGTCCACTGACCGATCATTACTTCAACGTGATCGCTTTAACGCGATAGTCATTGGTGCTAGTTCGAAACGATAGAGAAGAAGCATAATAATTAATATTATAATACGATTATAAAGAAATATTATCATCGAGAAAAATGGTAAACGAATTGTTTCTTATTTCCGTTNNTTTTTTCTTAACGATTCCTTAAGGGAGAAACGAAGAATGAAGAGAAAAAAAAAGAAAAACGAGAAGAAACGGAGAGGATATAGAAAAAAAGACGAAAAAACACAGATAGTATCGCATAATAATCGAAGTCGCATAATGAACGAAGTTACCG]

[-] EMBL BI505737             [TTTTTTTCTCTCTCTCTTATAAATCCTTTCATCGATCGGAATCTCTCCATCGAGGCAGTCGAGCAATGCGAGTAGAAAC     AGTAAGTAATGTGTTCCACTGTCTCGATGGGGGGGGGAAGAATATATTAGTAAGAAAGTGGTGAAGAAAGACACGTTCCTTCTACGAAGACGACGATTTTACACGTGTGATAATTGTTTGTACTTGTGCGTGGAGCACGCGTTACGGACCAAAAACGATCGTCATTGTTACGACCCAGCAGCATCCGTTATACTTACTCGTTCTGTATAATTATTGTGATCTTGGTGCAATATTTGCATAATATTTTTGTCCCTTGTCCCCGAATTGACCACGAAGAGTCGAAAATACAAAAAACGATTATACGACGAGAGACAGAGAACAGAAGGAGAAAAAGGGATCCACGAGAGGACGTGCGAATAAAACGTACGGTTTGTTGGATCCGTTTCCGATTTTCGATCATTTTAGCCCGACATTCCATGTAACATTACCGCGTTTGT ATTTATACGATACGTATTGTAGATAATCGTTTCGTTGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI506931             [                TTATAAATCCTTTCATCGATCGGAATCTCTCCATCGAGGCAGTCGAGCAATACGAGTAGAAACGAATACGAAAATAATGTGTTCCACTGTCTCGAT  GGGGAGGAAGAATATATTAGTAAGAAAGTGGTGAAGAAAGACACGTTCCTTCTACGAAGACGACGATTTTACACGTGTGATAATTGTTTGTACTTGTGCGTGGAGCACGCGTTACGGACCAAAAACGATCGTCATTGTTACGACCCAGCAGCATCCGTTATACTTACTCGTTCTGTATAATTATTGTGATCTTGGTGCAATATTTGCATAATATTTTTGTCCCTTGTCCCCGAATTGACCACGAAGAGTCGAAAATACAAAAAACGATTATACGACGAGAGACAGAGAACAGAAGGAGAAAAAGGGATCCACGAGAGGACGTGCGAATAAAACGTACGGTTCGTTGGATCCGTTTCCGATTTTCGATCATTTTAGCCCGACATTCCATGTAACATTACCGCGTTTGTAATTTATACGATACGTATTGTAGATAACCGTTTCGTTGACAATTGATTAGTTTTCCTCCCTCCCTCCAGTTTTTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI509913             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTTCCGATTTTCGATCATTTTAGCCCGACATTCCATGTAACATTACCGCGTTTGTAATTTATACGATACGTATTGTAGATAACCGTTTCGTTGACAATTGATTAGTTTTCCTCCCTCCCTCCAGTTTTTTTTTTTTTCGTTTATCTCTGAAAAAAAAGAAAAAGAAAAAGAAAAAAAAACGAACGAATGAGCGATGAGCGTATGAGAGCGAGAGCGCGTGCGGACGAGAGAGAGATGGATTAATGTCACATGGAATGCGCGAGAAAATAATGTTTGACGATTAAATTATATTTACGAATTATTAACGAATATAACGAATCGCTTGTATTGTGTGCACACAGAAAAATAACCGCGGAAAGGATGAAAGGAAGAAGGCATAATATTAATATAACGTACCGGTAGAACCTTTTCAGGGAGTATCCGTAACTTTTACGTTAGTACGTAACGAAGAAAATAAATATATACATAACTTGTTCGACTTTATTTTTTATACGTTGCGTTTATAACTCGAGGGAGAGTAGGGAA                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI505463             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATGAGCGATGAGCGTATGAGAGCGAGAGCGCGTGCGGACGAGAGAGAGATGGATTAATGTCACATGGAATGCGCGAGAAAATAATGTTTGACGATTAAATTATATTTACGAATTATTAACGAATATAACGAATCGCTTGTATTGTGTGCACACAGAAAAATAACCGCGGAAAGGATGAAAGGAAGAAGGCATAATATTAATATAACGTACCGGTAGAACCTTTTCAGGGAGTATCCGTGACTTTTACGTTAGTACGTAACGAAGAAAATAAATATATACATAACTTGTTCGACTTTATTTTTTATACGTTGCGTTTATAACTCGAGGGAGAGTAGGGAAAGAGCGGTTCGATTATTCGAAATCGAGAACGAAACGTCCACTGACCGATCATTACTTCAACGTGATCGCTTTAACGCGATAGTCATTGGTGCTAGTTCGAAACGATAGAGAAGAAGCATAATAATTAATATTATAATACGATTATAAAGAAATATTATCATCGAGA                                                                                                                                                                                          ]
[+] EMBL BI516528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACGTTGCGTTTATAACTCGAGGGAGAGTAGGGAAAGAGCGGTTCGATTATTCGAAATCGAGAACGAAACGTCCACTGACCGATCATTACTTCAACGTGATCGCTTTAACGCGATAGTCATTGGTGCTAGTTCGAAACGATAGAGAAGAAGCATAATAATTAATATTATAATACGATTATAAAGAAATATTATCATCGAGAAAAATGGTAAACGAATTGTTTCTTATTTCCGTTNNTTTTTTCTTAACGATTCCTTAAGGGAGAAACGAAGAATGAAGAGAAAAAAAAAGAAAAACGAGAAGAAACGGAGAGGATATAGAAAAAAAGACGAAAAAACACAGATAGTATCGCATAATAATCGAAGTCGCATAATGAACGAAGTTACCG]


>consensus_281#0 TTTTTTTCTCTCTCTCTTATAAATCCTTTCATCGATCGGAATCTCTCCATCGAGGCAGTC GAGCAATGCGAGTAGAAACGAATAAGAAAGTAATGTGTTCCACTGTCTCGATGGGGGGGG GAAGAATATATTAGTAAGAAAGTGGTGAAGAAAGACACGTTCCTTCTACGAAGACGACGA TTTTACACGTGTGATAATTGTTTGTACTTGTGCGTGGAGCACGCGTTACGGACCAAAAAC GATCGTCATTGTTACGACCCAGCAGCATCCGTTATACTTACTCGTTCTGTATAATTATTG TGATCTTGGTGCAATATTTGCATAATATTTTTGTCCCTTGTCCCCGAATTGACCACGAAG AGTCGAAAATACAAAAAACGATTATACGACGAGAGACAGAGAACAGAAGGAGAAAAAGGG ATCCACGAGAGGACGTGCGAATAAAACGTACGGTTCGTTGGATCCGTTTCCGATTTTCGA TCATTTTAGCCCGACATTCCATGTAACATTACCGCGTTTGTAATTTATACGATACGTATT GTAGATAACCGTTTCGTTGACAATTGATTAGTTTTCCTCCCTCCCTCCAGTTTTTTTTTT TTTCGTTTATCTCTGAAAAAAAAGAAAAAGAAAAAGAAAAAAAAACGAACGAATGAGCGA TGAGCGTATGAGAGCGAGAGCGCGTGCGGACGAGAGAGAGATGGATTAATGTCACATGGA ATGCGCGAGAAAATAATGTTTGACGATTAAATTATATTTACGAATTATTAACGAATATAA CGAATCGCTTGTATTGTGTGCACACAGAAAAATAACCGCGGAAAGGATGAAAGGAAGAAG GCATAATATTAATATAACGTACCGGTAGAACCTTTTCAGGGAGTATCCGTGACTTTTACG TTAGTACGTAACGAAGAAAATAAATATATACATAACTTGTTCGACTTTATTTTTTATACG TTGCGTTTATAACTCGAGGGAGAGTAGGGAAAGAGCGGTTCGATTATTCGAAATCGAGAA CGAAACGTCCACTGACCGATCATTACTTCAACGTGATCGCTTTAACGCGATAGTCATTGG TGCTAGTTCGAAACGATAGAGAAGAAGCATAATAATTAATATTATAATACGATTATAAAG AAATATTATCATCGAGAAAAATGGTAAACGAATTGTTTCTTATTTCCGTTNNTTTTTTCT TAACGATTCCTTAAGGGAGAAACGAAGAATGAAGAGAAAAAAAAAGAAAAACGAGAAGAA ACGGAGAGGATATAGAAAAAAAGACGAAAAAACACAGATAGTATCGCATAATAATCGAAG TCGCATAATGAACGAAGTTACCG



clustalw multiple alignements is not computed in this case


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)