These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2862#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence [TCCATATATGATTTTCTTAGTTTTCACGAAGACAACATTTCTTGCTTCGTCAACGATAATATAATACTAAACAATGAATGGCTATTTAGTCGTTGAGAAGATAGTAATATCAGCAAGAATGGAACAAATTTACACAGGACTAGCACATATCTGATTAAGAAGCGGTCTGCCACAAACACGATGCGTCCTGTATCTTCGATGAACATGGAACGAGTTGATGAAATACTCTCAAATATTTTTTTTCCTCGTTTCAGGATTTCCAGCGAATATATGAGAATATTCTGTTCTTGCTGCTAGTGCGGCTAAAACGAATTCAAAATTCACTGTCGTATCGGCAAAATCAATTTTTGCATTCTGAAAAATTTTATCAGATTCTTCCAGTGGCACATTTAGCGAGAGTTTTAAAGCTTTTCTTAATTCCATTTTATTAATACACGATAATGATTTTGTGCCACATACTTCAAACGCTGTTTCAACTTTGTCTAGCTCCGAATTTGCGTT] [+] EMBL BI515562 [TCCATATATGATTTTCTTAGTTTTCACGAAGACAACATTTCTTGCTTCGTCAACGATAATATAATACTAAACAATGAATGGCTATTTAGTCGTTGAGAAGATAGTAATATCAGCAAGAATGGAACAAATTTACACAGGACTAGCACATATCTGATTAAGAAGCGGTCTGCCACAAACACGATGCGTCCTGTATCTTCGATGAACATGGAACGAGTTGATGAAATACTCTCAAATATTTTTTTTCCTCGTTTCAGGATTTCCAGCGAATATATGAGAATATTCTGTTCTTGCTGCTAGTGCGGCTAAAACGAATTCAAAATTCACTGTCGTATCGGCAAAATCAATTTTTGCATTCTGAAAAATTTTATCAGATTCTTCCAGTGGCACATTTAGCGAGAGTTTTAAAGCTTTTCTTAATTCCATTTTATTAATACACGATAATGATTTTGTGCCACATACTTCAAACGCTGTTTCAACTTTGTCTAGCTCCGAATTTGCGTT] consensusID : consensus_2862#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 448 fasta sequence [AAAGATTTAGCGAAGAAGTTAATTTACATGAATTTGCGCAAATTCTTAGAATAGATGCAAAAGAATCTGCTACTCAACAACTGTTTCGAATACATGATAGAGTCTGTATCATTTATTTTTTATTCATTACAATATTTATATCATGGTATACTTGTTTTGTCAAATATCTAGTATCTTTTATTATTTTCATTTTCTCTCAGATTCTAATATCAAAGATAATATTAAAATAGNCTAAGTTTATTATGTTAATAGTAATCGGTTAACATTTCTGCGCGTGGATATAAATAATGCATATATATTACACGCGAAAAATTAGTTTATTGATACAATGATTATTGCAGCAAGGAAATGGTAAAATAGATTTGGAAGAATATTTATTCACGGTACTAGCNNCGACAAACGCAAATTCGGAGCTAGACAAAGTTGAAACAGCGTTTGAAGTATGTGG] [+] EMBL BI508486 [AAAGATTTAGCGAAGAAGTTAATTTACATGAATTTGCGCAAATTCTTAGAATAGATGCAAAAGAATCTGCTACTCAACAACTGTTTCGAATACATGATAGAGTCTGTATCATTTATTTTTTATTCATTACAATATTTATATCATGGTATACTTGTTTTGTCAAATATCTAGTATCTTTTATTATTTTCATTTTCTCTCAGATTCTAATATCAAAGATAATATTAAAATAGNCTAAGTTTATTATGTTAATAGTAATCGGTTAACATTTCTGCGCGTGGATATAAATAATGCATATATATTACACGCGAAAAATTAGTTTATTGATACAATGATTATTGCAGCAAGGAAATGGTAAAATAGATTTGGAAGAATATTTATTCACGGTACTAGCNNCGACAAACGCAAATTCGGAGCTAGACAAAGTTGAAACAGCGTTTGAAGTATGTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2862#0 TCCATATATGATTTTCTTAGTTTTCACGAAGACAACATTTCTTGCTTCGTCAACGATAAT 60 consensus_2862#1 ----------------AAAGATTTAGCGAAGAAGTTAATTTACATGAATTTGCGCAAATT 44 ** *** ****** * ** * * * * consensus_2862#0 ATAATACTAAACAATGAATGGCTATTTAGTCGTTGAGAAGATAGTAATATCAGCAAGAAT 120 consensus_2862#1 CTTAGAATAGATGCAAAAGAATCTGCTACTCAACAACTGTTTCG-AATACATGATAGAGT 103 * * * ** * ** ** ** * * * **** * *** * consensus_2862#0 GGAACAAATTTACACAGGACTAGCACATATCTGATTAAGAAGCGGTCTGCCACAAACACG 180 consensus_2862#1 CTGTATCATTTATTTTTTATT--CATTACAATATTTATATCATGGTATACTTGTTTTGTC 161 ***** * * ** * *** *** * * consensus_2862#0 ATGCGTCCTGTATCTTCGATGAACATGGAACGAGTTGATGAAATACTCTCAAATATTTTT 240 consensus_2862#1 AAATATCTAGTATCTTTTATTATTTTCATTTTCTCTCAGATTCTAATATCAAAGATAATA 221 * ** ******* ** * * * * ** * ***** ** * consensus_2862#0 TTTCCTCGTTTCAGGATTTCCAGCGAATATATGAGAATATTCTGTTCTTGCTGCTA-GTG 299 consensus_2862#1 TTAAAATAGNCTAAGTTTATTA-----TGT-TAATAGTAATCGGTTAACATTTCTGCGCG 275 ** * * ** * * * * * * ** ** *** * ** * * consensus_2862#0 CGGCTAAAACGAATTCAAAATTCACTGTCGTATCGGCAAAATCAATTTTTGCATTCTGAA 359 consensus_2862#1 TGGATATAAATAATGCATAT----ATATTACACGCGAAAAATTAGTTTATTGATAC--AA 329 ** ** ** *** ** * * * * * ***** * *** * ** * ** consensus_2862#0 AAATTTTATCAGATTCTTCCAGTGGCACATTTAGCGAGAGTTTTAAAGCTTTTCTTAATT 419 consensus_2862#1 TGATTATTGCAG-------CAAGGAAATGGTAAAATAGA-TTTGGAAGAATATTTATTCA 381 *** * *** ** * * * * *** *** *** * * * consensus_2862#0 CCATTTTATTAATACACGATAATGATTTTGTGCCA--CATACTTCAAACGCTGTTTCAAC 477 consensus_2862#1 CGGTACTAGCNNCGACAAACGCAAATTCGGAGCTAGACAAAGTTGAAACAGCGTTTGAAG 441 * * ** * *** * ** * ** * ** **** **** ** consensus_2862#0 TTTGTCTAGCTCCGAATTTGCGTT 501 consensus_2862#1 TATGTGG----------------- 448 * *** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |