These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2928#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 447 fasta sequence [CATTTTTCGCGTTTTATACTTTTCTTTTCTCTCCATTGGTTATTCTATTATTAATATGTTCCTATCTATGTCGCTGTATCATAGAGATCATTTTAAGGATACAATTAAAGGATAAATTCGTGGGTCTCCTTGATGGGATGGACTGCGTTTGGGCGGTAGAACAATCATCGGCACTTTCTGTGAATAATATCCTTATGATTTTAGAAAAAGATGCTCGTCACTCGAATATCAACTTCCTGGAGAGTTTTCGTGATTTGGTGAGGAATCGCATAGTATGCTCGTCTTTTGAAAAGCTGTTGTACAAGAGAAAGAGAAAATTTGGTTATTATTTCTGGGAGAGAAGTGAAGAGATCGATCTGAGAGAACGTATCAGATGGTTGGAATACGAGCGCACGAATTGCGACGGATCCTGTGATAATATTTACAATAGTCATCTGAAGAAAGTTC] [+] EMBL BI516740 [CATTTTTCGCGTTTTATACTTTTCTTTTCTCTCCATTGGTTATTCTATTATTAATATGTTCCTATCTATGTCGCTGTATCATAGAGATCATTTTAAGGATACAATTAAAGGATAAATTCGTGGGTCTCCTTGATGGGATGGACTGCGTTTGGGCGGTAGAACAATCATCGGCACTTTCTGTGAATAATATCCTTATGATTTTAGAAAAAGATGCTCGTCACTCGAATATCAACTTCCTGGAGAGTTTTCGTGATTTGGTGAGGAATCGCATAGTATGCTCGTCTTTTGAAAAGCTGTTGTACAAGAGAAAGAGAAAATTTGGTTATTATTTCTGGGAGAGAAGTGAAGAGATCGATCTGAGAGAACGTATCAGATGGTTGGAATACGAGCGCACGAATTGCGACGGATCCTGTGATAATATTTACAATAGTCATCTGAAGAAAGTTC] consensusID : consensus_2928#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence [TATTTACAATAGTCATCTGAAGAAAGTTCTATGGAATATTTGCAACCAACCANNNACCGGAGAATCACACAGCATCCTGGGAGATCTTAATTGGAAAATGTTGTCCCAGATTGAGTCATCATTATCTTCGACGTATGGAGGAACGTTTGACGAATAAAATCAAGATTCCCATTTTATTTCGCGTCCATCATTCTTTAGGCGATGGTATGGCACTTCTAAAGTTCTTTAGAGATGTTATTATTGACAAGGAACCAGTTCCGGAAACATTCTTACAGTTGGATAGCAGTTTGAAAATGAAGAACGAGA] [+] EMBL BI508103 [TATTTACAATAGTCATCTGAAGAAAGTTCTATGGAATATTTGCAACCAACCANNNACCGGAGAATCACACAGCATCCTGGGAGATCTTAATTGGAAAATGTTGTCCCAGATTGAGTCATCATTATCTTCGACGTATGGAGGAACGTTTGACGAATAAAATCAAGATTCCCATTTTATTTCGCGTCCATCATTCTTTAGGCGATGGTATGGCACTTCTAAAGTTCTTTAGAGATGTTATTATTGACAAGGAACCAGTTCCGGAAACATTCTTACAGTTGGATAGCAGTTTGAAAATGAAGAACGAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2928#0 CATTTTTCGCGTTTTATACTTTTCTTTTCTCTCCATTGGTTATTCTATTATTAAT-ATGT 59 consensus_2928#1 ---TATTTACAATA-GTCATCTGAAGAAAGTTCTATGGAATATT-TGCAACCAACCANNN 55 * ** * * * * * ** ** * **** * * ** * consensus_2928#0 TCCTATCTATGTCGCTGTATCATAG-AGATCATTTTAAGGATACAAT-TAAAGGATAAAT 117 consensus_2928#1 ACCGGAGAATCACACAGCATCCTGGGAGATCTTAATTGGAAAATGTTGTCCCAGATTGAG 115 ** ** * * * *** * * ***** * * * * * * * *** * consensus_2928#0 TCGTGGGTCTCCTTGATGGGATGGACTGCGTTTGGGCGGTAGAACAATCATCGGCACTTT 177 consensus_2928#1 TCATCATTATCTTCGACGTATGGAGGAACGTTTGACGAATAAAATCAAGATTCCCATTTT 175 ** * * ** * ** * * ****** ** ** * ** ** *** consensus_2928#0 CTGTGAATAATATCCTTATGATTTTAGAAAAAGATGCTCGTCACTCGAATATCAACTTCC 237 consensus_2928#1 ATTTCGCGTCCATCATT----CTTTAGGCGATGGTA-TGGCACTTCTAAAGTT--CTTTA 228 * * *** ** ***** * * * * * ** ** * *** consensus_2928#0 TGGAGAGTTTTCGTGATTTGGTGAGGAATCGCATAGTATGCTCGTCTTTTGAAAAGCTGT 297 consensus_2928#1 GAGATGTTATTATTGACAAGGAACCAGTTCCGGAAACATTCTTA-CAGTTGGATAGCAGT 287 ** * ** *** ** ** * ** ** * *** * *** ** consensus_2928#0 TGTACAAGAGAAAGAGAAAATTTGGTTATTATTTCTGGGAGAGAAGTGAAGAGATCGATC 357 consensus_2928#1 TTGAAAATGAAGAACGAGA----------------------------------------- 306 * * ** * * ** * consensus_2928#0 TGAGAGAACGTATCAGATGGTTGGAATACGAGCGCACGAATTGCGACGGATCCTGTGATA 417 consensus_2928#1 ------------------------------------------------------------ consensus_2928#0 ATATTTACAATAGTCATCTGAAGAAAGTTC 447 consensus_2928#1 ------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |