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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_31#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 976 fasta sequence
[ACTTCGTGGGATTCAAAAAACTATCAACGCGGGACTTCGTGGGATTCGAAGAAGACTATCNNNGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACGCCGGACTGTGGGATTCCAAGAAGACTATCAACGTGGGACTTCGTGGGATTCAAAGAAGAGTATCGACGTGGGACTTCGTGGGATTCAAAGAGGACTATCGACGTGGGACTTCGTGGGATTCAAAGAAGACTATCGACGCGGGACTTCGTGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAAAGAAGACTATCAACGCTGGACCGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATGCGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATAAAATTTGTAATCC-AAAAAACCGTCATTGCCAGATATCATGAAATTCAAAAGGAATATTAAAAAAAGATTTAATGAAATTTAAATATTAGCGAGATAAATTTTTAAAAATATAAAAAATT------ATTGGAATTAGAAACAAATCTCAAATTCTGATATTTGAAACTTATTACCAAATACAAGTGTGTTACTTAATGAATTTTCTAAAGAAAGGATCTGCTTATTTCTATTTTATTCACATATTTATGATATTGCTATATTAACTGATTCATATGCTATGATAATATATTCAACGAAATTAGGAAACTATGTGAATGTGAAATAGAAATAAAAATTATGATAAATAGATTTTTTTTCGTAATCGATTATCAATCATTCAAATATAGTTATGTATCTTTTTTAATTTTTATTA]
[+] EMBL BI506437 [ACTTCGTGGGATTCAAAAAACTATCAACGCGGGACTTCGTGGGATTCGAAGAAGACTAT NNNGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACGCCGGACTGTGGGATTCCAAGAAGACTATCAACGTGGGACTTCGTGGGATTCAAAGAAGAGTATCGACGTGGGACTTCGTGGGATTCAAAGAGGACTATCGACGTGGGACTTCGTGGGATTCAAAGAAGACTATCGACGCGGGACTTCGTGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAAAGAAGACTATCAACGCTGGACCGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGAT ]
[+] EMBL BI503158 [ TTCGTGGGATTCGAAGAAGACTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACGCCGGACTGTGGGATTCCAAGAAGACTATCAACGTGGGACTTCGTGGGATTCAAAGAAGAGTATCGACGTGGGACTTCGTGGGATTCAAAGAGGACTATCGACGTGGGACTTCGTGGGATTCAAAGAAGACTATCGACGCGGGACTTCGTGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAAAGAAGACTATCAACGCTGGACCGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATGCGGTTTNATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTC ]
[+] EMBL BI508066 [ ACTATCAACGCCGGACTGTGGGATTCCAAGAAGACTATCAACGTGGGACTTCGTGGGATTCAAAGAAGAGTATCGACGTGGGACTTCGTGGGATTCAAAGAGGACTATCGACGTGGGACTTCGTGGGATTCAAAGAAGACTATCGACGCGGGACTTCGTGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAAAGAAGACTATCAACGCTGGACCGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATGCGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATAAAATTTGTAATCCAAAAAAACCGTCATTGCCAGATATCATGAAATTCAAAAGGNATATTAAAAAAAGATTTAATGAAATTTAAATATTAGCGAGATAAATTTTTAA ]
[+] EMBL BI509092 [ TGGGATTCCAAGAAGACTATCAACGTGGGACTTCGTGGGATTCAAAGAAGAGTATCGACGTGGGACTTCGTGGGATTCAAAGAGGACTATCGACGTGGGACTTCGTGGGATTCAAAGAAGACTATCGACGCGGGACTTCGTGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAATGAAGACTATCAACGCTGGACCGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATGCGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAA ]
[+] EMBL BI506801 [ GAGTATCGACGTGGGACTTCGTGGGATTCAAAGAGGACTATCGACGTGGGACTTCGTGGGATTCAAAGAAGACTATCGACGCGGGACTTCGTGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAAAGAAGACTATCAACGCTGGACCGAGGGATTCAAANNNGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGAT ]
[+] EMBL BI507130 [ TCAAAGAGGACTATCGACGTGGGACTTCGTGGGATTCAAAGAAGACTATCGACGCGGGACTTCGTGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAAAGAAGACTATCAACGCTGGACCGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATGCGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATAAAATTTGTAATCC AAAAAACCGTCATTGCCAGATATCATGAAATTCAAAAGGAATATTAAAAAAAGATTTAATGAAATTTAAATATTAGCGAGATAAATTTTTAAAAATATAAAAAATT ATTGGAATTAGAAACAAATCTCAAATTCTGATATTTGAAACTTATTACCAAATACAAGTGTGTTACTTAATGAATTTTCTAAAGAAAGGATCTGCTTATTTCTATTTTATTCACATATTTATGATATTGCTATATTAACTGATTCATATGCTATGATAAT ]
[+] EMBL BI517240 [ GGACTTCGTGGGATTCAAAGAAAACTATCAACGCCGGACTGTGGGATTCAAAGAAGACTATCAACGCTGGATCGAAGGATTCAAAGAAGA CTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAGATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATACGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATGAAATTTGTAATCC AAAAAACCGTCATTGCCAGATATCATGAAATTCAAAAGGAATATTAAAAAAAGATTTAATGAAATTTAAATATTAGCGAGATAAATTTTTAAAGATATAA ]
[+] EMBL BI510624 [ TGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAAAGAAGACTATCAACGCTGGACCGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATGCGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATAAAATTTGTAATCC AAAAAACCGTCATTGCCAGATATCATGAAATTCAAAAGGAATATTAAAAAAAGATTTAATGAAATTTAAATATTAGCGAGATAAATTTTTAAAAATATAAAAAATT ATTGGAATTAGAAACAAATCTCAAATTCTGATATTTGAAACTTATTACCAAATACAAGTGTGTTACTTA ]
[+] EMBL BI517044 [ TGGGATTCAAAGAAGACTATCAACGCTGGACCGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATGCGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATAAAATTTGTAATCC AAAAAACCGTCATTGCCAGATATCATGAAATTCAAAAGGAATATTAAAAAAAGATTTAATGAAATTTAAATATTAGCGAGATAAATTTTTAAAAATATAAAAAATT ATTGGAATTAGAAACAAATCTCAAATTCTGAT ]
[+] EMBL BI508724 [ agaCTATCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAGATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATACGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATGAAATTTGTAATCC AAAAAACCGTCATTGCCAGATATCATGAAATTCAAAAGGAATATTAAAAAAAGATTTAATGAAATTTAAATATTAGCGAGATAAATTTTTAAAGATATAAAAAATTATTGAAATTGGAATTAGAAACAAATCTCAAATTCTGATATTTGAAACTTATTACCAAATACAAGTGTGTTACTTAATGAATTTTCTAAAGAAAGGATCTGCTTATTTCTATTTTATTCACATATTTATGATATTGCTATATTAACTGATTCATATGCTATGATAATA ]
[+] EMBL BI514757 [ TCAACGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGTGGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGATCATCAATGCGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATTGTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATAAAATTTGTAATCC AAAAAACCGTCATTGCCAGATATCATGAAATTCAAAAGGAATATTAAAAAAAGATTTAATGAAATTTAAATATTAGCGAGATAAATTTTTAAAAATATAAAAAATT ATTGGAATTAGAAACAAATCTCAAATTCTGATATTTGAAACTTATTACCAAATACAAGTGTGTTACTTAATGAATTTTCTAAAGAAAGGATCTGCTTATTTCTATTTTATTCACATATTTATGATATTGCTATATTAACTGATTCATATGCTATGATAATATATTCAACGAAATTAGGAAACTATGTGAATGTGAAATAGAAATAAAAATTATGATAAATAGATTTTTTTTCGTAATCGATTATCAATCATTCAAATATAGTTATGTATCTTTTTTAATTTTTATTA]
consensusID : consensus_31#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 466 fasta sequence
[TTGCAATTTCAACGAATAGATGCAAATTTTAATAATAGAAGATGCTACCAATTAAATAAATTTAAAATTATTAATGGAGAACTTCAGAGAAACAATAAGATTTCATAAAATCCAAATGAAAATATTATCGCGAAACTAAATGGCATTCAAAAAAAATTATCAATGTGAATTTTTATAGAATTTAAAAAAAGGCTATTAATATGGATCTTTATAGGATTCAAAGGAGACTCGATACGAGTCTTTTTAGGATTCAAAGATTATCAACGTAGGATTCAGAAGAAACTATCAACACAGGATTTCGAAGGATTTAAAGAAGACTATCAACGCGGGACTTCATGAAATTCAGAAGATCGACTCAGGATTTCGTGAGATTCGGAAAAGNTTACTGACGCGGGACTTCGTGGGATTCAAAAAACTATCAACGCGGGACTTCGTGGGATTCGAAGAAGNCTATCAACGTGGGACT]
[+] EMBL BI516871 [TTGCAATTTCAACGAATAGATGCAAATTTTAATAATAGAAGATGCTACCAATTAAATAAATTTAAAATTATTAATGGAGAACTTCAGAGAAACAATAAGATTTCATAAAATCCAAATGAAAATATTATCGCGAAACTAAATGGCATTCAAAAAAAATTATCAATGTGAATTTTTATAGAATTTAAAAAAAGGCTATTAATATGGATCTTTATAGGATTCAAAGGAGACTCGATACGAGTCTTTTTAGGATTCAAAGATTATCAACGTAGGATTCAGAAGAAACTATCAACACAGGATTTCGAAGGATTTAAAGAAGACTATCAACGCGGGACTTCATGAAATTCAGAAGATCGACTCAGGATTTCGTGAGATTCGGAAAAGNTTACTGACGCGGGACTTCGTGGGATTCAAAAAACTATCAACGCGGGACTTCGTGGGATTCGAAGAAGNCTATCAACGTGGGACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_31#0 -----ACTTCGTGGGATTCAAAAAACTATCAACG-CGGGACTTCGTGGGATTCGAAGAAG 54
consensus_31#1 TTGCAATTTCAACGAATAGATGCAAATTTTAATAATAGAAGATGCTACCAATTAAATAAA 60
* *** * ** * ** * * ** * * * * * * ** **
consensus_31#0 ACTATCNNNGTGGGACTTCGTGGGATTCAAAGAAGACTATCAACGCCGGACTGTGGGATT 114
consensus_31#1 TTTAAAATTATTAA---TGGAGAACTTCAGAGAAA-----CAATAAGATTTCATAAAATC 112
** * * * * **** **** *** * **
consensus_31#0 CCAAGAAGACTATCAACGTGGGACTTCGTGGGATTCAAAGAAGAGTATCGACGTGGGACT 174
consensus_31#1 CAAATGAAAATATTATCGCGAAACTAAATGGCATTCAAAAAAAATTATCAATGTGAATTT 172
* ** * * *** * ** * *** *** ******* ** * **** * *** *
consensus_31#0 TCGTGGGATTCAAAGAG-GACTATCGACGTGGGACTTCGTGGGATTCAAAGAAGACTATC 233
consensus_31#1 TTATAGAATTTAAAAAAAGGCTATTAATATGGATCTTTATAGGATTCAAAGGAGACT--C 230
* * * *** *** * * **** * *** *** * ********** ***** *
consensus_31#0 GACGCGGGACTTCGTGGGATTCAAAGAAGACTATCAATGCCGGACTGTGGGATTCAAAGA 293
consensus_31#1 GATACGAGTCTTTTTAGGATTCAAA---GATTATCAACG--------TAGGATTCAGAAG 279
** ** * *** * ********* ** ****** * * ******* *
consensus_31#0 AGACTATCAACGCTGGAC--CGAGGGATTCAAAGAAGACTATCTATCAACGTGGGACTTC 351
consensus_31#1 AAACTATCAACACAGGATTTCGAAGGATTTAAAGAAGACT----ATCAACGCGGGACTTC 335
* ********* * *** *** ***** ********** ******* ********
consensus_31#0 GTGGGATTCAAAGAAGACTATCAACATCGGACTGTGGGATTCAAAGAAAATTATCAACGT 411
consensus_31#1 ATGAAATTCAGAAGATCGACTCAGGATT---TCGTGAGATTCGGAAAAGNTTACTGACGC 392
** ***** * * *** ** *** ***** * ** *** ***
consensus_31#0 GGGACTTCGTGGGATTCAAAGAAGATTATGAACGCAGAACTTTGTGGGATTCAAAGAAGA 471
consensus_31#1 GGGACTTCGTGGGATTCAAAAAA--CTATCAACGCGGGACTTCGTGGGATTCGAAGAAGN 450
******************** ** *** ***** * **** ********* ******
consensus_31#0 TCATCAATGCGGTTTAATGAAATTTCATGATAAATTATTAATGCGGGATTTTATAGGATT 531
consensus_31#1 CTATCAACGTGGGACT-------------------------------------------- 466
***** * **
consensus_31#0 GTAGGAAAGCGCCTTCGTATTCAAAAAAAGACTTCGATAAAATTTGTAATCCAAAAAACC 591
consensus_31#1 ------------------------------------------------------------
consensus_31#0 GTCATTGCCAGATATCATGAAATTCAAAAGGAATATTAAAAAAAGATTTAATGAAATTTA 651
consensus_31#1 ------------------------------------------------------------
consensus_31#0 AATATTAGCGAGATAAATTTTTAAAAATATAAAAAATTATTGGAATTAGAAACAAATCTC 711
consensus_31#1 ------------------------------------------------------------
consensus_31#0 AAATTCTGATATTTGAAACTTATTACCAAATACAAGTGTGTTACTTAATGAATTTTCTAA 771
consensus_31#1 ------------------------------------------------------------
consensus_31#0 AGAAAGGATCTGCTTATTTCTATTTTATTCACATATTTATGATATTGCTATATTAACTGA 831
consensus_31#1 ------------------------------------------------------------
consensus_31#0 TTCATATGCTATGATAATATATTCAACGAAATTAGGAAACTATGTGAATGTGAAATAGAA 891
consensus_31#1 ------------------------------------------------------------
consensus_31#0 ATAAAAATTATGATAAATAGATTTTTTTTCGTAATCGATTATCAATCATTCAAATATAGT 951
consensus_31#1 ------------------------------------------------------------
consensus_31#0 TATGTATCTTTTTTAATTTTTATTA 976
consensus_31#1 -------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |