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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_313#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 570 fasta sequence
[ACCGACCGAGGATTGATTGATCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTATTATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAGGGGATTGGATTATTTCACGTCTATTAATATTTCGCATATTGTAGGAAAGACTCCAAAACCTCTTTCGCTTTTCTTCTCACGAAGGAAGAGTTGCGAGAGGTTGTTTTAAGTGGCCTCCCAATCTCGCGGAACGGGAGTCTTTCACGAGAATATATTTTACGAGATCTCTGTATGAGATCTCTCACTTTTTCTTTTATCGGTAAATTGATCGATTGACGCGTAGAATGAGACTAATCGAGAGAGAGAGAGAGAGAGAGGAACGTAATTTGGAAATTGATTTCGATGTCAATGAGCGAATTTTTAGCGAGAATTATGGGAGGATACTGCGTATTTAATTGTATTCCACTCGAAGAATTTTAGATTTCTCGATCTTGCGAATCGAATGGGAGGAAAGGATGTAGAGATTGAGGAAAAGGGGGATAGAGGGAAGAGTATATTATAGGAACCAAAAATAGAGGA]
[+] EMBL BI508701 [ACCGACCGAGGATTGATTGATCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTATTATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAGGGGATTGGATTATTTCACGTCTATTAATATTTCGCATATTGTAGGAAAGACTCCAAAACCTCTTTCGCTTTTCTTCTCACGAAGGAAGAGTTGCGAGAGGTTGTTTTAAGTGGCCTCCCAATCTCGCGGAACGGGAGTCTTTCACGAGAATATATTTTACGAGATCTCTGTATGAGATCTCTCACTTTTTCTTTTATCGGTAAATTGATCGATTGACGCGTAGAATGAGACTAATCGAGAGAGAGAGAGAGAGAGAGGAACGTAATTTGGAAATTGATTTCGATGTCAATGAGCGAATTTTTAGCGAGAATTATGGGAGGATACTGCGTATTTAATTGTATTCCACTCGAAGAATTTTAGATTTCTCGATCTTGCGAATCGAATGGGAGGAAAGGATGTAGAGATTGAGGAAAAGGGGGATAGAGGGAAGAGTATATTATAGGAACCAAAAATAGAGGA]
consensusID : consensus_313#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 521 fasta sequence
[TCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTATTATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAGGGGATTGGATTATTTCACGTCTATTAATATTTCGCATATTGTAGGAAAGACTCCAAAACCTCTTTCGCTTTTCTTCTCACGAAGGAAGAGTTGCGAGAGGTTGTTTTAAGTGGCCTCCCAATCTCGCGGAACGGGAGTCTTTCACGAGAATATATTTTACGAGATCTCTGTGCGAGAGTCACTTTTTCTTTTATCCTAGNAAGAATACTTGAGTATTTTTCGGTAAATTGATCGATTGACGCGTAGNATGAGACTAATCGAGAGAGAGAGAGGAACGTAATTTGGAAATTGATTTCGCTGTTGTCAACGAGCGAGTTTTTAGCGAGAATTATGGGAGGATACTCGCTGCGTATTTAATTGTATTCTACTCGAAGAATTTTAGATTTCTCGATCTTGCGAATCGAATGGGAGGAAAGGATGTAGAGATTGA]
[+] EMBL BI509681 [TCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTATTATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAGGGGATTGGATTATTTCACGTCTATTAATATTTCGCATATTGTAGGAAAGACTCCAAAACCTCTTTCGCTTTTCTTCTCACGAAGGAAGAGTTGCGAGAGGTTGTTTTAAGTGGCCTCCCAATCTCGCGGAACGGGAGTCTTTCACGAGAATATATTTTACGAGATCTCTGTGCGAGAGTCACTTTTTCTTTTATCCTAGNAAGAATACTTGAGTATTTTTCGGTAAATTGATCGATTGACGCGTAGNATGAGACTAATCGAGAGAGAGAGAGGAACGTAATTTGGAAATTGATTTCGCTGTTGTCAACGAGCGAGTTTTTAGCGAGAATTATGGGAGGATACTCGCTGCGTATTTAATTGTATTCTACTCGAAGAATTTTAGATTTCTCGATCTTGCGAATCGAATGGGAGGAAAGGATGTAGAGATTGA]
[+] EMBL BI512916 [TCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTATTATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAGGGGATTGGATTATTTCACGTCTATTAATATTTCGCATATTGTAGGAAAGACTCCAAAACCTCTTTCGCTTTTCTTCTCACGAAGGAAGAGTTGCGAGAGGTTGTTTTAAGTGGCCTCCCAATCTCGCGGAACGGGAGTCTTTCACGAGAATATATTTTACGAGATCTCTGTGCGAGAGTCACTTTTTCTTTTATCCTAGGAAGAATACTTGAGTATTTTTCGGTAAATTGATCGATTGACGCGTAGAATGAGACTAATCGAGAGAGAGAGAGGAACGTAATTTGGAAATTGATTTCGCTGTTGTCAACGAGCGAGTTTT ]
consensusID : consensus_313#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 198 fasta sequence
[TCAGAATCGTTCCAGACAAATATTTCGTGGAGATATATAACGTCGTCTCGAACCAACCGACCGAGGATTGATTGATCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTATTATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI504155 [TCAGAATCGTTCCAGACAAATATTTCGTGGAGATATATAACGTCGTCTCGAACCAACCGACCGAGGATTGATTGATCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTATTATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAATCAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL BI506929 [ CAAATATTTCGTGGAGATATATAACGTCGTCTCGAACCAACCGACCGAGGATTGATTGATCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTATTATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_313#0 -------------------------------------------------------ACCGA 5
consensus_313#1 ------------------------------------------------------------
consensus_313#2 TCAGAATCGTTCCAGACAAATATTTCGTGGAGATATATAACGTCGTCTCGAACCAACCGA 60
consensus_313#0 CCGAGGATTGATTGATCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTAT 65
consensus_313#1 ---------------TCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTAT 45
consensus_313#2 CCGAGGATTGATTGATCGACTGAGGAAACTTCGTTTCGAAAAGCTTCCGTTTATTATTAT 120
*********************************************
consensus_313#0 TATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAGGGGATTGGATTATT 125
consensus_313#1 TATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAGGGGATTGGATTATT 105
consensus_313#2 TATTATTGTTATTATTTGATTAAATCGACGTCTCTTGTCGGCTTAATCAAAAAAAAAAAA 180
********************************************* * * *
consensus_313#0 TCACGTCTATTAATATTTCGCATATTGTAGGAAAGACTCCAAAACCTCTTTCGCTTTTCT 185
consensus_313#1 TCACGTCTATTAATATTTCGCATATTGTAGGAAAGACTCCAAAACCTCTTTCGCTTTTCT 165
consensus_313#2 AAAAAAAAAAAAAAAAAA------------------------------------------ 198
* * ** *
consensus_313#0 TCTCACGAAGGAAGAGTTGCGAGAGGTTGTTTTAAGTGGCCTCCCAATCTCGCGGAACGG 245
consensus_313#1 TCTCACGAAGGAAGAGTTGCGAGAGGTTGTTTTAAGTGGCCTCCCAATCTCGCGGAACGG 225
consensus_313#2 ------------------------------------------------------------
consensus_313#0 GAGTCTTTCACGAGAATATATTTTACGAGATCTCTGTATGAGA-----TCTCTCACTTTT 300
consensus_313#1 GAGTCTTTCACGAGAATATATTTTACGAGATCTCTGTGCGAGAGTCACTTTTTCTTTTAT 285
consensus_313#2 ------------------------------------------------------------
consensus_313#0 TCT------------------TTTATCGGTAAATTGATCGATTGACGCGTAGAATGAGAC 342
consensus_313#1 CCTAGNAAGAATACTTGAGTATTTTTCGGTAAATTGATCGATTGACGCGTAGNATGAGAC 345
consensus_313#2 ------------------------------------------------------------
consensus_313#0 TAATCGAGAGAGAGAGAGAGAGAGAGGAACGTAATTTGGAAATTGATTTCGATGT---CA 399
consensus_313#1 TAATCGAGAGAGAG--------AGAGGAACGTAATTTGGAAATTGATTTCGCTGTTGTCA 397
consensus_313#2 ------------------------------------------------------------
consensus_313#0 ATGAGCGAATTTTTAGCGAGAATTATGGGAGGATACT----GCGTATTTAATTGTATTCC 455
consensus_313#1 ACGAGCGAGTTTTTAGCGAGAATTATGGGAGGATACTCGCTGCGTATTTAATTGTATTCT 457
consensus_313#2 ------------------------------------------------------------
consensus_313#0 ACTCGAAGAATTTTAGATTTCTCGATCTTGCGAATCGAATGGGAGGAAAGGATGTAGAGA 515
consensus_313#1 ACTCGAAGAATTTTAGATTTCTCGATCTTGCGAATCGAATGGGAGGAAAGGATGTAGAGA 517
consensus_313#2 ------------------------------------------------------------
consensus_313#0 TTGAGGAAAAGGGGGATAGAGGGAAGAGTATATTATAGGAACCAAAAATAGAGGA 570
consensus_313#1 TTGA--------------------------------------------------- 521
consensus_313#2 -------------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |