These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_327#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 607 fasta sequence [TGTTTCGCCGTGTGTGAGCATAAATGTGCAACAAGTAAGTTTATTTAAAGCTATTGATATGGCCATGTCTAGCATTTTATTAATGCGTAAAGGTCTTTCAGTAAATGGTTTTAGAAGTTTATGGACTTGTAGAGTTTTATTCAATGATCAAATTAAAAATGATACACAAAAATCAAATCAGAAATATAAAAATAATGAAAGTGAAGAAGAATACGAGAAAAATATCAAATCAAAAATTCTTGATGCATCTTTAAAATATGTTCATGATCTAGGATGGAGTCATAAAGCCATCAGTGCTGGTGCTGAGTCTATTGGGTATCCTGGGATAATTCATGGATTATTCCCTAATCGAGGAGCAGATTTGGTTCAATATTTCTACTTAACATGCAACAAAAAGTTGAATAACATCCTTAAAGAACAAACTCTTGCAAATCAAGAAAATCCTAAAGAAACAAAAACACTACTATTAGAAGCACGTAATGCTGTTGAGACAAGGCTTAGAATGGTGATTCCTTATAAAAAAACATGGCCACAGGCTTTAGCTCTCATGTCTCTTCCACCTAATGTACCAATGTCATTAGCTAATTTACTTACTTTAGTAGATGAT] [+] EMBL BI512377 [TGTTTCGCCGTGTGTGAGCATAAATGTGCAACAAGTAAGTTTATTTAAAGCTATTGATATGGCCATGTCTAGCATTTTATTAATGCGTAAAGGTCTTTCAGTAAATGGTTTTAGAAGTTTATGGACTTGTAGAGTTTTATTCAATGATCAAATTAAAAATGATACACAAAAATCAAATCAGAAATATAAAAATAATGAAAGTGAAGAAGAATACGAGAAAAATATCAAATCAAAAATTCTTGATGCATCTTTAAAATATGTTCATGATCTAGGATGGAGTCATAAAGCCATCAGTGCTGGTGCTGAGTCTATTGGGTATCCTGGGATAATTCATGGATTATTCCCTAATCGAGGAGCAGATTTGGTTCAATATTTCTACTTAACATGCAACAAAAAGTTGAATAACATCCTTAAAGAACAAACTCTTGCAAATCAAGAAAATCCTAAAGAAACAAAAACACTACTATTAGAAG ] [+] EMBL BI513102 [ TAAATGTGCAACAAGTAAGTTTATTTAAAGCTATTGATATGGCCATGTCTAGCATTTTATTAATGCGTAAAGGTCTTTCAGTAAATGGTTTTAGAAGTTTATGGACTTGTAGAGTTTTATTCAATGATCAAATTAAAAATGATACACAAAAATCAAATCAGAAATATAAAAATAATGAAAGTGAAGAAGAATACGAGAAAAATATCAAATCAAAAATTCTTGATGCATCTTTAAAATATGTTCATGATCTAGGATGGAGTCATAAAGCCATCAGTGCTGGTGCTGAGTCTATTGGGTATCCTGGGATAATTCATGGATTATTCCCTAATCGAGGAGCAGATTTGGTTCAATATTTCTACTTAACATGCAACAAAAAGTTGAATAACATCCTTAAAGAACAAACTCTTGCAAATCAAGAAAATCCTAAAGAAACAAAAACACTACTATTAGAAG ] [+] EMBL BI515120 [ ATTGATATGGCCATGTCTAGCATTTTATTAATGCGTAAAGGTCTTTCAGTAAATGGTTTTAGAAGTTTATGGACTTGTAGAGTTTTATTCAATGATCAAATTAAAAATGATACACAAAAATCAAATCAGAAATATAAAAATAATGAAAGTGAAGAAGAATACGAGAAAAATATCAAATCAAAAATTCTTGATGCATCTTTAAAATATGTTCATGATCTAGGATGGAGTCATAAAGCCATCAGTGCTGGTGCTGAGTCTATTGGGTATCCTGGGATAATTCATGGATTATTCCCTAATCGAGGAGCAGATTTGGTTCAATATTTCTACTTAACATGCAACAAAAAGTTGAATAACATCCTTAAAGAACAAACTCTTGCAAATCAAGAAAATCCTAAAGAAACAAAAACACTACTATTAGAAGCACGTAATGCTGTTGAGACAAGGCTTAGAATGGTGATTCCTTATAAAAAAACATGGCCACAGGCTTTAGCTCTCATGTCTCTTCCACCTAATGTACCAATGTCATTAGCTAATTTACTTACTTTAGTAGATGAT] consensusID : consensus_327#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 552 fasta sequence [TAAAAAAACATGGCCACAGGCTTTAGCTCTCATGTCTCTTCCACCTAATGTACCAATGTCATTAGCTAATTTACTTACTTTAGTAGATGATATTTGCTATTATGCTGGTGATAGATCAGTTGATATAAACTGGTATACTAGAAGAATAGTACTAGCAGGTATTTATAAAACTACGGAATTATACATGATACAAGATAATAGTGAAGATCATCAAAAAACTTGGCATTTTTTGGATAGACGAATTAAAGATGCCACACAAATTCAAATGATTCTAACAACAACTTCTGATATGGCTTTACCAGATCAAGCCTTAAATCGTGCTACTGAAGCTGCAACTGCTGCTTTTGTTACAGCACGCAATATACTTGGATTGAATTGGAATAGGTAGAAAACAAATAATTAATATTATATAATACTTTATGGTATTAATTATTACTAGATTACTAAAATAAAAACATGGAATATAAATTCATTTGTTACAAATGAAAATTTATCAAAAGAATTTATGTACAGAGTTTATTTAGTAATGGTATTAAAAAAAAACATTAAAAA] [+] EMBL BI507211 [TAAAAAAACATGGCCACAGGCTTTAGCTCTCATGTCTCTTCCACCTAATGTACCAATGTCATTAGCTAATTTACTTACTTTAGTAGATGATATTTGCTATTATGCTGGTGATAGATCAGTTGATATAAACTGGTATACTAGAAGAATAGTACTAGCAGGTATTTATAAAACTACGGAATTATACATGATACAAGATAATAGTGAAGATCATCAAAAAACTTGGCATTTTTTGGATAGACGAATTAAAGATGCCACACAAATTCAAATGATTCTAACAACAACTTCTGATATGGCTTTACCAGATCAAGCCTTAAATCGTGCTACTGAAGCTGCAACTGCTGCTTTTGTTACAGCACGCAATATACTTGGATTGAATTGGAATAGGTAGAAAACAAATAATTAATATTATATAATACTTTATGGTATTAATTATTACTAGATTACTAAAATAAAAACATGGAATATAAATTCATTTGTTACAAATGAAAATTTATCAAAAGAATTTATGTACAGAGTTTATTTAGTAATGGTATTAAAAAAAAACATTAAAAA] consensusID : consensus_327#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence [CATGTCTAGCATTTTATTAATGCGTAAAGGTCTTTCAGTAAATGGTTTTAGAAGTTTATGGACTTGTAGAGTTTTATTCAATGATCAAATTAAAAATGATACACAAAAATCAAATCAGAAATATAAAAATAATGAAAGTGAAGAAGAATATGAGAAAAATATCAAATCAAAAATTCTTGATGCATCTTTAAAATATGTTCATGATCTAGGATGGAGTCATAAAGCCATCAGTGCTGGTAATTTGTAATAATTTTTCAGTGCTGAGTCTATTGGGTATCCTGGGATAATTCATGGATTATTCCCTAATCGAGGAGCAGATTTGGTTCAATATTTCTACTTAACATGCAACAAAAAGTTGAATAACATCCTTAAAGAACAAACTCTTGCAAATCAAGAAAATCCTAAAGAAACAAAAACACTACTATTAGAAGCACGTAATGCT] [+] EMBL BI515967 [CATGTCTAGCATTTTATTAATGCGTAAAGGTCTTTCAGTAAATGGTTTTAGAAGTTTATGGACTTGTAGAGTTTTATTCAATGATCAAATTAAAAATGATACACAAAAATCAAATCAGAAATATAAAAATAATGAAAGTGAAGAAGAATATGAGAAAAATATCAAATCAAAAATTCTTGATGCATCTTTAAAATATGTTCATGATCTAGGATGGAGTCATAAAGCCATCAGTGCTGGTAATTTGTAATAATTTTTCAGTGCTGAGTCTATTGGGTATCCTGGGATAATTCATGGATTATTCCCTAATCGAGGAGCAGATTTGGTTCAATATTTCTACTTAACATGCAACAAAAAGTTGAATAACATCCTTAAAGAACAAACTCTTGCAAATCAAGAAAATCCTAAAGAAACAAAAACACTACTATTAGAAGCACGTAATGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_327#0 -------------------------TGTTTCGCCGTGTGTGAGCATAAATGTGCAACAAG 35 consensus_327#2 ------------------------------------------------------------ consensus_327#1 TAAAAAAACATGGCCACAGGCTTTAGCTCTCATGTCTCTTCCACCTAATGTACCAATGTC 60 consensus_327#0 TAAGTTTATTTAAAGCTATTGATATGGCCATGTCTAGCATTTTATTAATGCGTAAAGGTC 95 consensus_327#2 ----------------------------CATGTCTAGCATTTTATTAATGCGTAAAGGTC 32 consensus_327#1 ATTAGCTAATTTACTTACTTTAGTAGATGATATTTGCTATTATGCTGGTGATAGATCAGT 120 ** * * *** * * ** * consensus_327#0 TTTCAGTAAATGGTTT--TAGAAGTTTATGGACTTGTAGAGTTTTATTCAATGATCAAAT 153 consensus_327#2 TTTCAGTAAATGGTTT--TAGAAGTTTATGGACTTGTAGAGTTTTATTCAATGATCAAAT 90 consensus_327#1 TGATATAAACTGGTATACTAGAAGAATA-GTACTAGCAGGTATTTATAAAACTACGGAAT 179 * * ** **** * ****** ** * *** * ** ***** ** * *** consensus_327#0 TAAAAATGATACACAAAAATCAAATCAGAAATATAAAAATAATGAAAGTGAAGAAGA-AT 212 consensus_327#2 TAAAAATGATACACAAAAATCAAATCAGAAATATAAAAATAATGAAAGTGAAGAAGA-AT 149 consensus_327#1 TATACATGATACAAGATAAT--AGTGAAGATCATCAAAAAACTTGGCATTTTTTGGATAG 237 ** * ******** * *** * * * * ** **** * * * ** * consensus_327#0 ACGAGAAAAATATCAAATCAAAAATTCTTGATGCATCTTTAAAATATGTTCATGATCTAG 272 consensus_327#2 ATGAGAAAAATATCAAATCAAAAATTCTTGATGCATCTTTAAAATATGTTCATGATCTAG 209 consensus_327#1 ACGAATTAAAGATGCCA-CACAAATTCA-AATG-ATTCTAACAACAACTTC-TGATATGG 293 * ** *** ** * ** ****** *** ** * * ** * *** **** * * consensus_327#0 GATGGAGTCATAAAGCCATCAGTGCTGGT---------------------GCTGAGTCTA 311 consensus_327#2 GATGGAGTCATAAAGCCATCAGTGCTGGTAATTTGTAATAATTTTTCAGTGCTGAGTCTA 269 consensus_327#1 CTTTACCAGATCAAGCCTTAAATCGTGCT---------------------ACTGAAGCTG 332 * ** ***** * * * ** * **** ** consensus_327#0 TTGG-GTATCCTGGGATAATTCATGGATTATTCCCTAATCGAGGAGCAGATTTGGTTCAA 370 consensus_327#2 TTGG-GTATCCTGGGATAATTCATGGATTATTCCCTAATCGAGGAGCAGATTTGGTTCAA 328 consensus_327#1 CAACTGCTGCTTTTGTTACAGCACGCAATATACTTGGATTGA--ATTGGAATAGGTAGAA 390 * * * * ** ** * * *** * ** ** * ** * *** ** consensus_327#0 TATTTCTACTTAACATGCAACAAAAAGTTGAATAACATCCTTAAAGAACAAACTCTTGCA 430 consensus_327#2 TATTTCTACTTAACATGCAACAAAAAGTTGAATAACATCCTTAAAGAACAAACTCTTGCA 388 consensus_327#1 AACAAATAATTAATAT--TATATAATACTTTATGGTATTAATTATTACTAGATTACT--A 446 * ** **** ** * * ** * ** ** * * * * * * * * consensus_327#0 AATCAAGAAAATCCTAAAGAAACAAAAACACTACTATTAGAAGCACGT---AATGCTGTT 487 consensus_327#2 AATCAAGAAAATCCTAAAGAAACAAAAACACTACTATTAGAAGCACGT---AATGCT--- 442 consensus_327#1 AAATAAAAACATGGAATATAAATTCATTTGTTACAAATGAAAATTTATCAAAAGAATTTA 506 ** ** ** ** * * *** * *** * * ** * ** * consensus_327#0 GAGACAAGGCTTAGAATGGTGATTCCTTATAAAAAAACATGGCCACAGGCTTTAGCTCTC 547 consensus_327#2 ------------------------------------------------------------ consensus_327#1 TGTACAGAGTTTATTTAGTAATGGTATTAAAAAAAAACATTAAAAA-------------- 552 consensus_327#0 ATGTCTCTTCCACCTAATGTACCAATGTCATTAGCTAATTTACTTACTTTAGTAGATGAT 607 consensus_327#2 ------------------------------------------------------------ consensus_327#1 ------------------------------------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |