These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_43#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence [AATTGGATCTGCTCGTGAGAAAAGTCTTAGGTTTCGGTTACGAATCCAACGTCAAGTATCAAGTCGTGCCATCCGCTCTTCAAATGTGGTCTACCAGCTTGAGGGATCCTGTATTCTTCAGCATCTACAAGACCATCCTTGATTATTATCACAAATACAAGGAAAATCTTCCGAAATACACCACGGAAGAATTAAACTTCCCAGGTGTAAGCATCGAATCCGTGACCGTGGACAAGCTCATCACTTATTTTGATCATTTCGAGTCCATGTTGAACAATGGAGTGTCGATTCAAAGTCACGCAAAAGCCAAGAACACCATGATCAAAGCTCGACAATACAGGTTGAACCACAAACCTTTTACCTATCACATCGTCGTGAACAGCGACAAAAACGTCAAAGGTATGGTCCGTATCTTCCTTGGACCGAAATACGACGAGTTCGGTCATGAAGTTGACCTCGTGCACAATTACATGAACTTCATGCAGATGGACGAGTTCGTGGTTAACCTGAAAAGCGGAAGCAACACGATCGAGAGGAACAGCCACGAATCTGNCTTCGTCGTCCCGACGAGGGTCCCAGCGACGTGCTGTACAACANGCTGGTGGTCANCGANGACNGTAGCCNAGACGTTCAAGTATTCATCCAAGCCTTA] [+] EMBL AF134821 [AATTGGATCTGCTCGTGAGAAAAGTCTTAGGTTTCGGTTACGAATCCAACGTCAAGTATCAAGTCGTGCCATCCGCTCTTCAAATGTGGTCTACCAGCTTGAGGGATCCTGTATTCTTCAGCATCTACAAGACCATCCTTGATTATTATCACAAATACAAGGAAAATCTTCCGAAATACACCACGGAAGAATTAAACTTCCCAGGTGTAAGCATCGAATCCGTGACCGTGGACAAGCTCATCACTTATTTTGATCATTTCGAGTCCATGTTGAACAATGGAGTGTCGATTCAAAGTCACGCAAAAGCCAAGAACACCATGATCAAAGCTCGACAATACAGGTTGAACCACAAACCTTTTACCTATCACATCGTCGTGAACAGCGACAAAAACGTCAAAGGTATGGTCCGTATCTTCCTTGGACCGAAATACGACGAGTTCGGTCATGAAGTTGACCTCGTGCACAATTACATGAACTTCATGCAGATGGACGAGTTCGTGGTTAACCTGAAAAGCGGAAGCAACACGATCGAGAGGAACAGCCACGAATCTGNCTTCGTCGTCCCGACGAGGGTCCCAGCGACGTGCTGTACAACANGCTGGTGGTCANCGANGACNGTAGCCNAGACGTTCAAGTATTCATCCAAGCCTTA] consensusID : consensus_43#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 627 fasta sequence [TCGCCCTTCGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAACGGAAGCAACACGATCGAGAGGAACAGCCACGAATCTGTCTTCGTCGTCCCCGACGAGGTTCCCAGCGACGTGCTGTACAACAGGCTGGTGGTCAGCGAGGACGGTAGCGGNACGTTCAAG-TATTCAT-CCCAG-CCTTACGGCTTCCCCGAG-AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG-CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG-CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACCGCGCAACATCCACGTGAAGGAGGTCCTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTA-ATACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAN-AAAAAAAAAGAATTCNANGTTTAAAGGAAGAGAGATGTNNAGAG-AAAAAAAGAGATGTGAACGAAATAAAAGGATNTGAAAATTACAAAAAAAAAAA] [+] EMBL BG101646 [TCGCCCTTCGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAACGGAAGCAACACGATCGAGAGGAACAGCCACGAATCTGTCTTCGTCGTCCCCGACGAGGTTCCCAGCGACGTGCTGTACAACAGGCTGGTGGTCAGCGAGGACGGTAGCGAGACGTTCAAG TATTCAT CCCAG CCTTACGGCTTCCCCGAG AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACTGTCCAACATCCACGTGAAGGAGGTCCTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTA ATACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAN AAAAAAAAAGAATTC GTTTAAAGGAAGAGAGATGTNNAGAG AAAAAAAGAGATGTGAACGAAATAAAAGGATNTGAAAATT ] [+] EMBL BG101541 [ aGNACGTTCAAGTTATTCATNCCCAGACCTTACGGCTTCCCCGAGAAGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACTGTCCAACATCCACGTGAAGGAGGTCCTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTA ATACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCT TTTTTAAATTATTTGAAGTANAAAAAAAAAANAATTCNANNNTTAAAG ] [+] EMBL BG101539 [ G TATTCAT CCCAG CCTTACGGCTTCCCCGAN AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACCTCG ] [+] EMBL BG101632 [ TATTCAT CCCAG CCTTNCGGCTTCCCCGAG AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATGCCCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGG CGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCTTTGCTCTTAGTACCTCGg ] [+] EMBL BG101633 [ TATTCAT CCCAG CCTTACGGCTTCCCCGAG AGGCTTCTTCTGCCCAAGGGCAAGAAAGAAGGTATG CCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGGCCGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCGATCCT ] [+] EMBL AF134815 [ ACGTGAAGGAGGTCCTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTATTTACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAG AAAAAAAAAGAATTCGAAGTTTAAAGGAAGAGAGATGTAGAGAGAAAAAAAAGAGATGTGAACGAAATAAAAGGATATGAAAATTACAAAAAAAAAAA] consensusID : consensus_43#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence [CTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAAAGAACGGATTCCGAAGTCAAAGTAAAAACGTGCAAGATGTTCGTCAAGTTGATACTGCTCGTCTCAATGATGTTTACCTTCGTTTGCGTACGAAGTATCGAAAACGAAGTTCAGCATTTATCATTGTTCTCCTCTATTCATCCCGACTCTATCACGGATGCTGAATCAGTCGTCACCGATGGACGCTGCGTTCTTCCACCGACCACCCATACAAGTATAAATATACCTCCTAATCATCACAAAATAATGAATTCGGATATGGCACGCCTCAAGAAAAGAACGCCAAGTCACAAGGAACAAGATCAGCAACAAGATTTACGACCTGGATGTTGTGGATAAAAAGTGGATTATTCGTCATCGATAAATTCTTTCTCGTGAATATTTGTTTTGAAAGTATTTACGTACAAATTATAGATGGTATTTAAACGCATATTATGAATACGTTTTCCTCTTTTTGGTTTCTTTCACAGATAAGATAGTAAATGAAATAAAATAATGGCTATCATGCCGCATAATGATNAA] [+] EMBL BG101648 [CTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAAAGAACGGATTCCGAAGTCAAAGTAAAAACGTGCAAGATGTTCGTCAAGTTGATACTGCTCGTCTCAATGATGTTTACCTTCGTTTGCGTACGAAGTATCGAAAACGAAGTTCAGCATTTATCATTGTTCTCCTCTATTCATCCCGACTCTATCACGGATGCTGAATCAGTCGTCACCGATGGACGCTGCGTTCTTCCACCGACCACCCATACAAGTATAAATATACCTCCTAATCATCACAAAATAATGAATTCGGATATGGCACGCCTCAAGAAAAGAACGCCAAGTCACAAGGAACAAGATCAGCAACAAGATTTACGACCTGGATGTTGTGGATAAAAAGTGGATTATTCGTCATCGATAAATTCTTTCTCGTGAATATTTGTTTTGAAAGTATTTACGTACAAATTATAGATGGTATTTAAACGCATATTATGAATACGTTTTCCTCTTTTTGGTTTCTTTCACAGATAAGATAGTAAATGAAATAAAATAATGGCTATCATGCCGCATAATGATNAA] consensusID : consensus_43#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 312 fasta sequence [CATCAAATTCTCNTCAGCCGGAACTTCGATAATCCCAGCCTTACGGCTTCCCCGAGAGGCTTCTTCTGCCCAAGGGCAAGANNGAAGGTATGCCGTCAATGTGCTCGTGGTCGTTTTTCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGGCGCCACATTTACGACNGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCNATCCTTTGCTCTTAGAACTGTNCAACATNCACGTGAAGGANGTCCTCGTTCATNATAAGGAGATGGAGGAGTTGAACGTTGCTNTGTNAACGTG] [+] EMBL BG101558 [CATCAAATTCTCNTCAGCCGGAACTTCGATAATCCCAGCCTTACGGCTTCCCCGAGAGGCTTCTTCTGCCCAAGGGCAAGANNGAAGGTATGCCGTCAATGTGCTCGTGGTCGTTTTTCCATTCGACGACTCGAACGTCGTCCAAATAGACTCCCCTGTGTGGGGGCGCCACATTTACGACNGACGTGCTATGGGCTTCCCTCTGGACAAGCCTGTCNATCCTTTGCTCTTAGAACTGTNCAACATNCACGTGAAGGANGTCCTCGTTCATNATAAGGAGATGGAGGAGTTGAACGTTGCTNTGTNAACGTG] consensusID : consensus_43#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 240 fasta sequence [AAGGAGGTCCTCGTTCTCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTATTTACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAGAAAAAAAAANNANTNCNAAGTTTAAAGGAANANANATGTAAANAGAAAAAAAANANATGTNACCNAANTAAANGGATNTNAAANTTCCAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BG101537 [AAGGAGGTCCTCGTTCTCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTATTTACGTAGATTTAATCTTTTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTAGAAAAAAAAANNANTNCNAAGTTTAAAGGAANANANATGTAAANAGAAAAAAAANANATGTNACCNAANTAAANGGATNTNAAANTTCCAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_43#1 TCGCCCTTCGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAACGGAAGCA 60 consensus_43#3 ------------------------------------------------------------ consensus_43#4 ------------------------------------------------------------ consensus_43#0 ------------------------------------------------AATTGGATCTGC 12 consensus_43#2 ------------------------------------------------------------ consensus_43#1 ACACGATCGAGAGGAACAGCCACGAATCTGTCTTCGTCGTCCCCGACGAGGTTCCCAGCG 120 consensus_43#3 ------------------------------------------------------------ consensus_43#4 ------------------------------------------------------------ consensus_43#0 TCGTGAGAAAAGTCTTAGGTTTCGGTTACGAATCCAACGTCAAGTATCAAGTCGTGCCAT 72 consensus_43#2 ---------------------------------CTGGAGCACGAGGACACTGACATGGAC 27 consensus_43#1 ACGTGCTGTACAACAGGCTGGTGGTCAGCGAGGAC--GGTAGCGG--NACGTTCAAGTAT 176 consensus_43#3 -------------------------CATCAAATTCTCNTCAGCCG--GAACTTCGA---- 29 consensus_43#4 ------------------------------------------------------------ consensus_43#0 CCGCTCTTCAAATGTGGTCTACCAGCTTGAGGGATCCTGTATTCTTCAGCATCTACAAGA 132 consensus_43#2 TGAAGGAGTAGAAAAGAACGGATTCCGAAGTCAAAGTAAAAACGTGCAAGATGTTCGT-C 86 consensus_43#1 TCATCCCAGCCTTACGGCTTCCCCGAGAGGCTTCTTCTGCCCA-AGGGCAAGAAAGAAGG 235 consensus_43#3 TAATCCCAGCCTTACGGCTTCCCCGAGAGGCTTCTTCTGCCCA-AGGGCAAGANNGAAGG 88 consensus_43#4 ------------------------AAGGAGGTCCTCGTTCTCATAGGGAGATGGAGGAGT 36 consensus_43#0 CCATCCTTGATTATTATCACAAATACAAGGAAAATCTTCCGAAATACACCACGGAAGAAT 192 consensus_43#2 AAGTTGATACTGCTCGTCTCAATGATGTTTACCTTCGTTTGCG-TACGAAGTATCGAAAA 145 * * * consensus_43#1 TATGCCGTACAATGTGCTCGTGGTCGTCTCGCCATTCGACGACTCGAACGTCGTC--CAA 293 consensus_43#3 TATGCCGT-CAATGTGCTCGTGGTCGTTTTTCCATTCGACGACTCGAACGTCGTC--CAA 145 consensus_43#4 TGAACGTTGCTCTGTAAACGTG-TAGAATTTATTTACGTAGATTTAATCTTTTCT--TCC 93 consensus_43#0 TAAACTTC-CCAGGTGTAAGCA-TCGAATCCGTGACCGTGGACAAGCTCATCACT--TAT 248 consensus_43#2 CGAAGTTCAGCATTTATCATTGTTCTCCTCTATTCATCCCGACTCTATCACGGATGCTGA 205 * * * ** * consensus_43#1 ATAGACTCCCCTGTGTGGGGGCGCCACATTTACGACGGACGTGCTATGGGCTTCCCTCTG 353 consensus_43#3 ATAGACTCCCCTGTGTGGGGGCGCCACATTTACGACNGACGTGCTATGGGCTTCCCTCTG 205 consensus_43#4 TTATTTTTTTCTTTATTCTTAAATTA--TTTGAAGTAGAAAAAAAAANNANTNCNAAGTT 151 consensus_43#0 TTTGATCATTTCGAGTCCATGT-TGAACAATGGAGTGTCGATTCAAAGTCACGCAAAAGC 307 consensus_43#2 ATCAGTCGTCACCGATGGACGCTGCGTTCTTCCACCGACCACCCATACAAGTATAAATAT 265 * * * consensus_43#1 GACAAGCCTGTCGATCCTTTGCTCTTAGTACCGCGCAACATCCACG---TGAAGGAGGTC 410 consensus_43#3 GACAAGCCTGTCNATCCTTTGCTCTTAGAACTGTNCAACATNCACG---TGAAGGANGTC 262 consensus_43#4 TAAAGGAANANANATGTAAANAGAAAAAAAANANATGTNACCNAAN---TAAANGGATNT 208 consensus_43#0 CAAGAACACCATGATCAAAGCTCGACAATACAGGTTGAACCACAAACCTTTTACCTATCA 367 consensus_43#2 --ACCTCCTAATCATCACAAAATAATGAATTCGGATATGGCACGCCTCAAGAAAAGAACG 323 ** * consensus_43#1 CTCGTTCATCATAGGGAGATGGAGGAGTTGAACGTTGCTCTGTAAACGTGTAGAATTTAA 470 consensus_43#3 CTCGTTCATNATAAGGAGATGGAGGAGTTGAACGTTGCTNTGTNAACGTG---------- 312 consensus_43#4 NAAANTTCCAAAAAAAAAAAAAAAAAAAAAAA---------------------------- 240 consensus_43#0 CATCGTCGTGAACAGCGACAAAAACGTCAAAGGTATGGTCCGTATCTTCCTTGGACCGAA 427 consensus_43#2 CCAAGTCACAAGGAACAAGATCAGCAACAAGATTTACGACCTGGATGTTGTGGATAAAAA 383 * * * consensus_43#1 TACGTAGATTTAATCTT-TTCTTCCTTATTTTTTTCTTTATTCTTAAATTATTTGAAGTA 529 consensus_43#3 ------------------------------------------------------------ consensus_43#4 ------------------------------------------------------------ consensus_43#0 ATACGACGAGTTCGGTC-ATGAAGTTGACCTCGTGCACAATTACATGAACTTCATGCAGA 486 consensus_43#2 GTGGATTATTCGTCATCGATAAATTCTTTCTCGTGAATATTTGTTTTGAAAGTATTTACG 443 consensus_43#1 NAAAAAAAAAGAATTCNANGTTTAAAGGAAGAGAGATGTNNAGAGAAAAAAAGAGATGTG 589 consensus_43#3 ------------------------------------------------------------ consensus_43#4 ------------------------------------------------------------ consensus_43#0 TGGACGAGTTCGTGGTTAACCTGAAAAGCGGAAGCAACACGATCGAGAGGAACAGCCACG 546 consensus_43#2 TACAAATTATAGATGGTATTTAAACGCATATTATGAATACGTTTTCCTCTTTTTGGTTTC 503 consensus_43#1 AACGAAATAAAAGGATNTGAAAATTACAAAAAAAAAAA---------------------- 627 consensus_43#3 ------------------------------------------------------------ consensus_43#4 ------------------------------------------------------------ consensus_43#0 AATCTGNCTTCGTCGTCCCGACGAGGGTCCCAGCGACGTGCTGTACAACANGCTGGTGGT 606 consensus_43#2 TTTCACAGATAAGATAGTAAATGAAATAAAATAATGGCTATCATGCCGCATAATGATNAA 563 consensus_43#1 ---------------------------------------------- consensus_43#3 ---------------------------------------------- consensus_43#4 ---------------------------------------------- consensus_43#0 CANCGANGACNGTAGCCNAGACGTTCAAGTATTCATCCAAGCCTTA 652 consensus_43#2 ---------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |