These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_433#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 499 fasta sequence [CGCCGTTCACCTATAATCACAAGTAAATGGATGGCGACGGTTCGAAAAGAAACAAAGGGGAGGAAGTAGAAGAAAAGGGCCGATGTGTCGGTGGATCGCTCGTCGCTTTCGACGCGTGGAATGGACGAACGAAACCGTTGCGAGAAAACGCGCGACATCACACGTTACACCCCTGGAGTGTCCTGGCACACGATAATCGGGATAAATAGATAAATACATAATACGATCGTCTATCTATTTATTTATTTATCGACATACATGTACATGTACGCAGATAAACAAGAAAAAACACGTGGGACACGCGTATAAATTAGTATTAAGCGCGACAAGAATGGAATGGAGCGAGAATTAGTCGCGAAAGTGATCGGATAAGTCGGTATTTTTGACCTCGATTCAGTACCTGTTCAGCGTACTTACCACGAAGCACCGCGACTTTGTTCCTCGGCCTCGATGGAGGAGAACGATTTCTCCTATTCTCGATGAAGTGGATACACGAAGA] [+] EMBL BI509010 [CGCCGTTCACCTATAATCACAAGTAAATGGATGGCGACGGTTCGAAAAGAAACAAAGGGGAGGAAGTAGAAGAAAAGGGCCGATGTGTCGGTGGATCGCTCGTCGCTTTCGACGCGTGGAATGGACGAACGAAACCGTTGCGAGAAAACGCGCGACATCACACGTTACACCCCTGGAGTGTCCTGGCACACGATAATCGGGATAAATAGATAAATACATAATACGATCGTCTATCTATTTATTTATTTATCGACATACATGTACATGTATGTCGATAAATAAAAAAAA ] [+] EMBL BI504548 [ TCACCTATAATCACAAGTAAATGGATGGCGACGGTTCGAAAAGAAACAAAGGGGAGGAAGTAGAAGAAAAGGGCCGATGTGTCGGTGGATCGCTCGTCGCTTTCGACGCGTGGAATGGACGAACGAAACCGTTGCGAGAAAACGCGCGACATCACACGTTACACCCCTGGAGTGTCCTGGCACACGATAATCGGGATAAATAGATAAATACATAATACGATCGTCTATCTATTTATTTATTTATCGACATACATGTACATGTACACACATACACACGAACACACACGTGGGACACGCGTATAAATTAGTATTAAGCGCGACAAGAATGGAATGGAGCGAGAATTAGTCGCGAAAGTGATCGGATAAGTCGGTATTTTTGACCTCGATTCAGTACCTGTTCAGCGTACTTACCACGAAGCACCGCGACTTTGTTCCTCGGCCTCGATGGAGGAGAACGATTTCTCCTATTCTCGATGAAGTGGATACACGAAGA] consensusID : consensus_433#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 314 fasta sequence [GAATGGACGAACGAAACCGTTGCGAGAAAACGCGCGACATCACACGTTACACCCCTGGAGTGTCCTGGCACACGATAATCGGGATAAATAGATAAATACATAATACGATCGTCTATCTATTTATTTATTTATCGACATACATGTACATGTACACACATACACACGAACACACACGTGGGACACGCGTATAAATTAGTATTAAGCGCGACAAGAATGGAATGGAGCGAGAATTAGTCGCGAAAGTGATCGGATAAGTCGGTATTTTTGACCTCGATTCAGTACCTGTTCAGCGTACTGAATCGAGGTCAAAAAAA] [+] EMBL BI504658 [GAATGGACGAACGAAACCGTTGCGAGAAAACGCGCGACATCACACGTTACACCCCTGGAGTGTCCTGGCACACGATAATCGGGATAAATAGATAAATACATAATACGATCGTCTATCTATTTATTTATTTATCGACATACATGTACATGTACACACATACACACGAACACACACGTGGGACACGCGTATAAATTAGTATTAAGCGCGACAAGAATGGAATGGAGCGAGAATTAGTCGCGAAAGTGATCGGATAAGTCGGTATTTTTGACCTCGATTCAGTACCTGTTCAGCGTACTGAATCGAGGTCAAAAAAA] [+] EMBL BI504284 [GAATGGACGAACGAAACCGTTGCGAGAAAACGCGCGACATCACACGTTACACCCCTGGAGTGTCCTGGCACACGATAATCGGGATAAATAGATAAATACATAATACGATCGTCTATCTATTTATTTATTTATCGACATACATGTACATGTACACACATACACACGAACACACACGTGGGACACGCGTATAAATTAGTATTAAGCGCGACAAGAATGGAATGGAGCGAGAATTAGTCGCGAAAGTGATCGGATAAGTCGGTATTTTTGACCTCGATTCAGTACCTGTTCAGCGTACTGAATCGAGGTCAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_433#0 CGCCGTTCACCTATAATCACAAGTAAATGGATGGCGACGGTTCGAAAAGAAACAAAGGGG 60 consensus_433#1 ------------------------------------------------------------ consensus_433#0 AGGAAGTAGAAGAAAAGGGCCGATGTGTCGGTGGATCGCTCGTCGCTTTCGACGCGTGGA 120 consensus_433#1 ----------------------------------------------------------GA 2 ** consensus_433#0 ATGGACGAACGAAACCGTTGCGAGAAAACGCGCGACATCACACGTTACACCCCTGGAGTG 180 consensus_433#1 ATGGACGAACGAAACCGTTGCGAGAAAACGCGCGACATCACACGTTACACCCCTGGAGTG 62 ************************************************************ consensus_433#0 TCCTGGCACACGATAATCGGGATAAATAGATAAATACATAATACGATCGTCTATCTATTT 240 consensus_433#1 TCCTGGCACACGATAATCGGGATAAATAGATAAATACATAATACGATCGTCTATCTATTT 122 ************************************************************ consensus_433#0 ATTTATTTATCGACATACATGTACATGTACGCAGATAAACAAGAAAAAACACGTGGGACA 300 consensus_433#1 ATTTATTTATCGACATACATGTACATGTACACACATACACACGAACACACACGTGGGACA 182 ****************************** ** *** *** *** * ************ consensus_433#0 CGCGTATAAATTAGTATTAAGCGCGACAAGAATGGAATGGAGCGAGAATTAGTCGCGAAA 360 consensus_433#1 CGCGTATAAATTAGTATTAAGCGCGACAAGAATGGAATGGAGCGAGAATTAGTCGCGAAA 242 ************************************************************ consensus_433#0 GTGATCGGATAAGTCGGTATTTTTGACCTCGATTCAGTACCTGTTCAGCGTACTTACCAC 420 consensus_433#1 GTGATCGGATAAGTCGGTATTTTTGACCTCGATTCAGTACCTGTTCAGCGTACTGAATCG 302 ****************************************************** * consensus_433#0 GAAGCACCGCGACTTTGTTCCTCGGCCTCGATGGAGGAGAACGATTTCTCCTATTCTCGA 480 consensus_433#1 AGGTCAAAAAAA------------------------------------------------ 314 ** * consensus_433#0 TGAAGTGGATACACGAAGA 499 consensus_433#1 ------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |