These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_498#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 688 fasta sequence [TCGAACAATGGAGAGGAGAAAAATACCGTATTATTGAATTATTTGAAATAATCGGTCGTCTCCACAGATAGAGAGGGGTGTAACTCAATTAAAATGATTTATATATATATATATATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA] [+] EMBL BI505681 [TCGAACAATGGAGAGGAGAAAAATACCGTATTATTGAATTATTTGAAATAATCGGTCGTCTCCACAGATAGAGAGGGGTGTAACTCAATTAAAATGATTTATATATATATATATATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA] [+] EMBL BI506858 [ ACCGTATTATTGAATTATTTGAAATAATCGGTCGTCTCCACAGATAGAGAGGGGTGTAACTCAATTAAAATGATTTATATATATATATATATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT ] consensusID : consensus_498#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 600 fasta sequence [TTTGAAATAATCGGTCGTCTCCACAGATAGAGAGGGGTGTAACTCAATTAAAATGATTTATATATATATATATATAAAAAAAAAAAGAAAAAGATACTCGAAGATAAACGTGCTAAACGATACATCGAACTAAATACGTAGGAATTTTTACTAAATCGTCAAAAGATCATTTCGATTCTCTTCTACTACCGTAAGAAAAGTATTTTCGCGACTCTACACTTGCTGCTTCGTCGCGATCCATCGATCCCTCCGTTTGAAGAAACGCTTGAAAAATAACGGAGAGAACGCACGTTTTGCATCGACATTCAGCGAAATTTTGCTCGCGAGAAGAAGAAGAAAAAAGAGAAAAGAGAGAAAGGGTTTCGACCAATAAACGTCGAATTCTAGCAATAGCGGTGTCGTTGTTCCGTATTCTCGTAGCTCGTGCCAATAAACGAAAACGAAAAAGATAGAACGAAGAAAGATTAAAATGGACCGAAATGTATTCACGATCGAAAGATAGAAAAAGAGAAAGAGAATGAGAATGAGAACGAAGAGAGAATCTGTTCGAAAAAGAGAAAACGAGCACGTGTAAAAATTATCGCATAACTTTGACTTGGA] [+] EMBL BI503767 [TTTGAAATAATCGGTCGTCTCCACAGATAGAGAGGGGTGTAACTCAATTAAAATGATTTATATATATATATATATAAAAAAAAAAAGAAAAAGATACTCGAAGATAAACGTGCTAAACGATACATCGAACTAAATACGTAGGAATTTTTACTAAATCGTCAAAAGATCATTTCGATTCTCTTCTACTACCGTAAGAAAAGTATTTTCGCGACTCTACACTTGCTGCTTCGTCGCGATCCATCGATCCCTCCGTTTGAAGAAACGCTTGAAAAATAACGGAGAGAACGCACGTTTTGCATCGACATTCAGCGAAATTTTGCTCGCGAGAAGAAGAAGAAAAAAGAGAAAAGAGAGAAAGGGTTTCGACCAATAAACGTCGAATTCTAGCAATAGCGGTGTCGTTGTTCCGTATTCTCGTAGCTCGTGCCAATAAACGAAAACGAAAAAGATAGAACGAAGAAAGATTAAAATGGACCGAAATGTATTCACGATCGAAAGATAGAAAAAGAGAAAGAGAATGAGAATGAGAACGAAGAGAGAATCTGTTCGAAAAAGAGAAAACGAGCACGTGTAAAAATTATCGCATAACTTTGACTTGGA] consensusID : consensus_498#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 421 fasta sequence [AGAAAAATACCGTATTATTGAATTATTTGAAATAATCGGTCGTCTCCACAGATAGAGAGGAGTGTAACTCAATTAAAATGATATATATATATATATATATATATATATATATATATAAAAAAAAAAAAAGAAAAAGATACTCGAAGATAAACGTGCTAAACGATACATCGAACTAAATACGTAGGAATTTTTACTAAATCGTCAAAAGATCATTTCGATTCTCTTCTACTACCGTAAGAAAAGTATTTTCGCGACTCTACACTTGCTGCTTCGTCGCGATCCATCGATCCCTCCGTTTGAAGAAACGCTTGAAAAATAACGGAGAGAACGCACGTTTTGCATCGACATTCAGCGAAATTTTGCTCGCGAGAAGAAGAAGAAAAAAGAGAAAAGAGAGAAAGGGTTTCGACCAATAAACGTC] [+] EMBL BI516616 [AGAAAAATACCGTATTATTGAATTATTTGAAATAATCGGTCGTCTCCACAGATAGAGAGGAGTGTAACTCAATTAAAATGATATATATATATATATATATATATATATATATATATAAAAAAAAAAAAAGAAAAAGATACTCGAAGATAAACGTGCTAAACGATACATCGAACTAAATACGTAGGAATTTTTACTAAATCGTCAAAAGATCATTTCGATTCTCTTCTACTACCGTAAGAAAAGTATTTTCGCGACTCTACACTTGCTGCTTCGTCGCGATCCATCGATCCCTCCGTTTGAAGAAACGCTTGAAAAATAACGGAGAGAACGCACGTTTTGCATCGACATTCAGCGAAATTTTGCTCGCGAGAAGAAGAAGAAAAAAGAGAAAAGAGAGAAAGGGTTTCGACCAATAAACGTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_498#1 -----------------------------------------TTTGAAATAATCGGTCGTC 19 consensus_498#2 ----------------AGAAAAATACCGTATTATTGAATTATTTGAAATAATCGGTCGTC 44 consensus_498#0 TCGAACAATGGAGAGGAGAAAAATACCGTATTATTGAATTATTTGAAATAATCGGTCGTC 60 ******************* consensus_498#1 TCCACAGATAGAGAGGGGTGTAACTCAATTAAAATGATTTATATATATATATATATA--- 76 consensus_498#2 TCCACAGATAGAGAGGAGTGTAACTCAATTAAAATGATATATATATATATATATATATAT 104 consensus_498#0 TCCACAGATAGAGAGGGGTGTAACTCAATTAAAATGATTTATATATATATATATATA-AT 119 **************** ********************* ****************** consensus_498#1 ---------------AAAAAAAAAAGAAAAAGATACTCGAAGATAAACGTGCTAAACGAT 121 consensus_498#2 ATATATATATATAAAAAAAAAAAAAGAAAAAGATACTCGAAGATAAACGTGCTAAACGAT 164 consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 179 * * * * * * * * *** * *** * * * ** consensus_498#1 ACATCGAACTAAATACGTAGGAATTTTTACTAAATCGTCAAAAGAT-CATTTCGATTCTC 180 consensus_498#2 ACATCGAACTAAATACGTAGGAATTTTTACTAAATCGTCAAAAGAT-CATTTCGATTCTC 223 consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 239 * ** * ** *** ** ** * ** * * * * ** ** * ** consensus_498#1 TTCTACTACCGTA-AGAAAAGTATTTTCGCGACTCTACACTTGCTGCTTCGTCGCGATCC 239 consensus_498#2 TTCTACTACCGTA-AGAAAAGTATTTTCGCGACTCTACACTTGCTGCTTCGTCGCGATCC 282 consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 299 * ** ** * * * *** * * ** * * * * ** consensus_498#1 ATCGATCCCTCCGTTTGAAGAAACGCTTGAAAAATAACGGAGAGA-ACGCACGTTT-TGC 297 consensus_498#2 ATCGATCCCTCCGTTTGAAGAAACGCTTGAAAAATAACGGAGAGA-ACGCACGTTT-TGC 340 consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 359 ** ** * * * * * * * * * * * * * * * * * * consensus_498#1 ATCGACATTCAGCGAAATTTTGCTCGCGAGAAGAAGAAGAAAAAAGAGAAAAGAGAGAAA 357 consensus_498#2 ATCGACATTCAGCGAAATTTTGCTCGCGAGAAGAAGAAGAAAAAAGAGAAAAGAGAGAAA 400 consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 419 ** * ** * * ** * * * * * * * * * * * * * consensus_498#1 GGGTTTCGACCAATAAACGTCGAATTCTAGCAATAGCGGTGTCGTTGTTCCGTATTCTCG 417 consensus_498#2 GGGTTTCGACCAATAAACGTC--------------------------------------- 421 consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 479 * * * *** * * consensus_498#1 TAGCTCGTGCCAATAAACGAAAACGAAAAAGATAGAACGAAGAAAGATTAAAATGGACCG 477 consensus_498#2 ------------------------------------------------------------ consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 539 consensus_498#1 AAATGTATTCACG-ATCGAAAGATAGAAAAAGAGAAAGAGAATGAGAATGAGAACGAAGA 536 consensus_498#2 ------------------------------------------------------------ consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 599 consensus_498#1 GAGAATCTGTTCGAAAAAGAGAAAACGAGCACGTGTAAAAATTATCGCATAACTTTGACT 596 consensus_498#2 ------------------------------------------------------------ consensus_498#0 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT 659 consensus_498#1 TGGA------------------------- 600 consensus_498#2 ----------------------------- consensus_498#0 ATATATATATATATATATATATATATATA 688 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |