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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_505#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1173 fasta sequence
[GTTTACGATTTAATCAAGATCAAGGATGTTTCACATGTTGTATGGAATCTGGTCTTAGAGTATATAATGTAGAACCATTAGTGGAAAAAGCTCATTTGGAAAATGATATAATGGGAAGTATAGCTATTGCAGAAATGCTTTGGAGAACAAACATCATTGCTATAGTAGGTGGTGGTACAAGACCAAAATTTGCAGAAAATACTGTACTTATTTATGATGATTTATCTAAAAAATTTATAATGGAAGTTACATTTACCAGTCCTATTAAAGCTATACGATTACGTAGAGACAAAATGATAGTAGCACTTCAACGAGAAATACATGTTTTCTCATTTCCTATGCCTACACGAAGATTATTGACTTTAGAAACCAGAGATAATCCAATGGGATTAATTGAAGTTGCTACATTAGCTACTGCACAAAAACAACTTCTTGCTTTCCCTGGCCATAAACAGGGTAGTGTACAATTAATTGATCTTGGTGCTACAGAAGCAGGAAGTTCTAGTGCTCCTGCAACTCTTGCAGCACATCAAGGTGCATTAGCTTGTCTTGCAGTTAATAATAGTGGAACAATGATAGCAACTGCTTCCACTCAAGGTACATTAGTTAGAGTATGGGACAGTATACGTAGACACTTGTTAGTGGAATTGAGAAGAGGTGCTGATCCTGCAACCCTTTATTGCATTACGTTTAGTAGAGATTCGGAATTCTTATGTGCTTCTAGTGATAAAGGAACAGTACACATATTTGCATTAAAAGACACACAATTAAATCGCAGATCGACTTTTTCAAAAATGGGATTTTTGGGAAATTATGTTGAAAGTCAATGGGCATTGGCTACATTCACCGTACCACCAGAATGTGCTTGCGTATGTGCATTTGGGACAAGAAGTTCTGTCATAGCAATTTGTATGGATGGAACATTTCATAAATATGTTTTTACTGCCGATGGAAATTGTAACCGTGAAGCATTTGATGTCTTCCTAGATGTTTGTGATCATGATGACTTTTAATATGAATTGTATATTATATTTAGAACATGTTTTAGAATATCTGTAGGAAAGTTTCCAGTCATTTTAAATAAGAAACTTCTTGCAGTAATATCTGTCCAGTAAATAATTAGGAAAATAATTATAAGAAGAGTCCAAGTCCCTCCAAAAAAAAAAAAAAAAA]
[+] EMBL BI504773 [GTTTACGATTTAATCAAGATCAAGGATGTTTCACATGTTGTATGGAATCTGGTCTTAGAGTATATAATGTAGAACCATTAGTGGAAAAAGCTCATTTGGAAAATGATATAATGGGAAGTATAGCTATTGCAGAAATGCTTTGGAGAACAAACATCATTGCTATAGTAGGTGGTGGTACAAGACCAAAATTTGCAGAAAATACTGTACTTATTTATGATGATTTATCTAAAAAATTTATAATGGAAGTTACATTTACCAGTCCTATTAAAGCTATACGATTACGTAGAGACAAAATGATAGTAGCACTTCAACGAGAAATACATGTTTTCTCATTTCCTATGCCTACACGAAGATTATTGACTTTAGAAACCAGAGATAATCCAATGGGATTAATTGAAGTTGCTACATTAGCTACTGCACAAAAACAACTTCTTGCTTTCCCTGGCCATAAACAGGGTAGTGTACAATTAATTGATCTTGGTGCTACAGAAGCAGGAAGTTCTAGTGCTCCTGCAACTCTTGCAGCACATCAAGGTGCATTAGCTTGTCTTGCAGTTAATAATAGTGGAACAATGATAGCAACTGCTTCCACTCAAGGTACATTAGTTAGAGTATG ]
[+] EMBL BI505155 [ GAGTATATAATGTAGAACCATTAGTGGAAAAAGCTCATTTGGAAAATGATATAATGGGAAGTATAGCTATTGCAGAAATGCTTTGGAGAACAAACATCATTGCTATAGTAGGTGGTGGTACAAGACCAAAATTTGCAGAAAATACTGTACTTATTTATGATGATTTATCTAAAAAATTTATAATGGAAGTTACATTTACCAGTCCTATTAAAGCTATACGATTACGTAGAGACAAAATGATAGTAGCACTTCAACGAGAAATACATGTTTTCTCATTTCCTATGCCTACACGAAGATTATTGACTTTAGAAACCAGAGATAATCCAATGGGATTAATTGAAGTTGCTACATTAGCTACTGCACAAAAACAACTTCTTGCTTTCCCTGGCCATAAACAGGGTAGTGTACAATTAATTGATCTTGGTGCTACAGAAGCAGGAAGTTCTAGTGCTCCTGCAACTCTTGCAGCACATCAAGGTGCATTAGCTTGTCTTGCAGTTAATAATAGTGGAACAATGATAGCAACTGCNTCCACTCAAGGTACATTAGTTAGAGTATGGGACAGTATACGTAGAC ]
[-] EMBL BQ103769 [ TAGTGTACAATTAATTGATCTTGGTGCTACAGAAGCAGGAAGTTCTAGTGCTCCTGCAACTCTTGCAGCACATCAAGGTGCATTAGCTTGTCTTGCAGTTAATAATAGTGGAACAATGATAGCAACTGCTTCCACTCAAGGTACATTAGTTAGAGTATGGGACAGTATACGTAGACACTTGTTAGTGGAATTGAGAAGAGGTGCTGATCCTGCAACCCTTTATTGCATTACGTTTAGTAGAGATTCGGAATTCTTATGTGCTTCTAGTGATAAAGGAACAGTACACATATTTGCATTAAAAGACACACAATTAAATCGCAGATCGACTTTTTCAAAAATGGGATTTTTGGGAAATTATGTTGAAAGTCAATGGGCATTGGCTACATTCACCGTACCACCAGAATGTGCTTGCGTATGTGCATTTGGGACAAGAAGTTCTGTCATAGCAATTTGTATGGATGGAACATTTCATAAATATGTTTTTACTGCCGATGGAAATTGTAACCGTGAAGCATTTGATGTCTTCCTAGATGTTTGTGATCATGATGACTTTTAATATGAATTGTATATTATATTTAGAACATGTTTTAGAATATCTGTAGGAAAGTTTCCAGTCATTTTAAATAAGAAACTTCTTGCAGTAATATCTGTCCAGTAAATAATTAGGAAAATAATTATAAGAAGAGTCCAAGTCCCTCCAAAAAAAAAAAAAAAAA]
consensusID : consensus_505#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 420 fasta sequence
[GATGACTTTTAATATGAATTGTATATTATATTTAGAACATGTTTTAGAATATCTGTAGGAAAGTTTCCAGTCATTTTAAATAAGAAACTTCTTGCAGTAATATCTGTACAGTAAATAATTAGGAAAATAATTATAAGAAGAGTACAAGTCACTACATTTATTGATTTCTCAATATAACATACTGAATATTTTTCAGTCTATTTTATATACATCAACATCTTAGTAACATATGTTCAATATATAATAAAAATTAATTTTATATCTTTAACTTGTTTTTTCTTAATAAAAATTGTAGTTTTGCAAATATATATATATATATATTCTTATTTATATTTCTTTGCTATTTTTGTAAGTTTTATTATGGGATTGTGCCACTTGTTCTCGAATTCTTTTATATGGCTCTGGATTAATCATAGGACT]
[-] EMBL BI515758 [GATGACTTTTAATATGAATTGTATATTATATTTAGAACATGTTTTAGAATATCTGTAGGAAAGTTTCCAGTCATTTTAAATAAGAAACTTCTTGCAGTAATATCTGTACAGTAAATAATTAGGAAAATAATTATAAGAAGAGTACAAGTCACTACATTTATTGATTTCTCAATATAACATACTGAATATTTTTCAGTCTATTTTATATACATCAACATCTTAGTAACATATGTTCAATATATAATAAAAATTAATTTTATATCTTTAACTTGTTTTTTCTTAATAAAAATTGTAGTTTTGCAAATATATATATATATATATTCTTATTTATATTTCTTTGCTATTTTTGTAAGTTTTATTATGGGATTGTGCCACTTGTTCTCGAATTCTTTTATATGGCTCTGGATTAATCATAGGACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_505#0 GTTTACGATTTAATCAAGATCAAGGATGTTTCACATGTTGTATGGAATCTGGTCTTAGAG 60
consensus_505#1 ---------------------GATGACTTTTAATATGAATTGTATATTATA--TTTAGAA 37
* ** *** * *** * * * * * *****
consensus_505#0 TATATAATGTAGAACCATTAGTGGAAAAAGCTCATTTGGAAAATGATATAATGGGAAGTA 120
consensus_505#1 CATGT--TTTAGAAT-ATCTGTAGGAAAGTTTC-------CAGTCATTT--TAAATAAGA 85
** * * ***** ** ** * *** ** * * ** * * * *
consensus_505#0 TAGCTATTGCAGAAATGCTTTGGAGAACAAACATCATTGCTATAGTAGGTGGTGGTACAA 180
consensus_505#1 AACTTCTTGCAGTAATA-TCTGTACAGTAAATA--ATTAGGAAAATAATTATAAG---AA 139
* * ****** *** * ** * * *** * *** * * ** * * **
consensus_505#0 GACCAAAATTTGCAGAAAATACTGTACTTATTTATGATGATTTATCTAAAAAATTTATAA 240
consensus_505#1 GAGTACAAGTCACTACATTTATTG-ATTTCTCAAT-ATAACATA-CTGAATATTTTTCAG 196
** * ** * * * ** ** * ** * ** ** * ** ** ** * *** *
consensus_505#0 TGGAAGTTACATTTACCAGTCCTATTAAAGCTATACGATTACGTAGAGACAAAATGATAG 300
consensus_505#1 TCTATTTTATATACATCAA-CATCTTAGTAACATATGTT----------CAATAT-ATAA 244
* * *** ** * ** * * *** *** * * *** ** ***
consensus_505#0 TAGCACTTCAACGAGAAATACATGTTTTCTCATTTCCTATGCCTACACGAAGATTATTGA 360
consensus_505#1 TAAAAATT-------AATTTTATATCTT-TAACTTGTTTTTTCTTAATAAAAATTGTAG- 295
** * ** ** * ** * ** * * ** * * ** * ** *** * *
consensus_505#0 CTTTAGAAACCAGAGATAATCCAATGGGATTAATTGAAGTTGCTACATTAGCTACTGCAC 420
consensus_505#1 -TTTTGCAAATATATATATATATATATTCTTATTTATATTTCTTTGCTATTTTTGTAAGT 354
*** * ** * * *** ** *** ** * ** * * * *
consensus_505#0 AAAAACAACTTCTTGCTTTCCCTGGCCATAAACAGGGTAGTGTA-CAATTAATTGATCTT 479
consensus_505#1 TTTATTATGGGATTGTGCCACTTGTTCTCGAATTCTTTTATATGGCTCTGGATTAATCAT 414
* * *** * ** * ** * * * * * *** *** *
consensus_505#0 GGTGCTACAGAAGCAGGAAGTTCTAGTGCTCCTGCAACTCTTGCAGCACATCAAGGTGCA 539
consensus_505#1 AGGACT------------------------------------------------------ 420
* **
consensus_505#0 TTAGCTTGTCTTGCAGTTAATAATAGTGGAACAATGATAGCAACTGCTTCCACTCAAGGT 599
consensus_505#1 ------------------------------------------------------------
consensus_505#0 ACATTAGTTAGAGTATGGGACAGTATACGTAGACACTTGTTAGTGGAATTGAGAAGAGGT 659
consensus_505#1 ------------------------------------------------------------
consensus_505#0 GCTGATCCTGCAACCCTTTATTGCATTACGTTTAGTAGAGATTCGGAATTCTTATGTGCT 719
consensus_505#1 ------------------------------------------------------------
consensus_505#0 TCTAGTGATAAAGGAACAGTACACATATTTGCATTAAAAGACACACAATTAAATCGCAGA 779
consensus_505#1 ------------------------------------------------------------
consensus_505#0 TCGACTTTTTCAAAAATGGGATTTTTGGGAAATTATGTTGAAAGTCAATGGGCATTGGCT 839
consensus_505#1 ------------------------------------------------------------
consensus_505#0 ACATTCACCGTACCACCAGAATGTGCTTGCGTATGTGCATTTGGGACAAGAAGTTCTGTC 899
consensus_505#1 ------------------------------------------------------------
consensus_505#0 ATAGCAATTTGTATGGATGGAACATTTCATAAATATGTTTTTACTGCCGATGGAAATTGT 959
consensus_505#1 ------------------------------------------------------------
consensus_505#0 AACCGTGAAGCATTTGATGTCTTCCTAGATGTTTGTGATCATGATGACTTTTAATATGAA 1019
consensus_505#1 ------------------------------------------------------------
consensus_505#0 TTGTATATTATATTTAGAACATGTTTTAGAATATCTGTAGGAAAGTTTCCAGTCATTTTA 1079
consensus_505#1 ------------------------------------------------------------
consensus_505#0 AATAAGAAACTTCTTGCAGTAATATCTGTCCAGTAAATAATTAGGAAAATAATTATAAGA 1139
consensus_505#1 ------------------------------------------------------------
consensus_505#0 AGAGTCCAAGTCCCTCCAAAAAAAAAAAAAAAAA 1173
consensus_505#1 ----------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |