These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_547#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 651 fasta sequence [TTATTAGCGCGTGATGCACGCCAATGTTCGTAAGCCCGCGAAATCTGAGAAGACGCCGCGGCGCAAGAAGCTCGTAGAGCAACAAAGCAACGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCAACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAAGTTGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGATTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAATGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGGTTTGTAATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATGTAAATATAAAAATTGAATAGATAAACATAGTCATTAAAATTATAAAATGAATGAATAATAG] [+] EMBL BI505403 [TTATTAGCGCGTGATGCACGCCAATGTTCGTAAGCCCGCGAAATCTGAGAAGACGCCGCGGCGCAAGAAGCTCGTAGAGCAACAAAGCAACGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCAACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAAGTTGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGATTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAATGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGGTTTGTNATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATCTAAATATAAAAATTGAAT ] [+] EMBL BI509450 [ AGAAGACGCCGCGGCGCAAGAAGCTCGTAGAGCAACAAAGCAACGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCAACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAAGTTGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGATTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAATGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGGTTTGTAATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATGTAAATATAAAAATTGAATAGATAAACATAGTCATTAAA ] [+] EMBL BI503175 [ ctgcTTCGCGAAAAAAATTCATTAATAAAAT TGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCAACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGAT GAACAGGAATGTATAAAGTTGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGATTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAATGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGGTTTGTAATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATGTAAATATAAAAATTGAATAGATAAACATAGTCATTAAAATTATAAAATGAATGAATAATAG] consensusID : consensus_547#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 257 fasta sequence [CGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAANNNGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTAC] [+] EMBL BI508394 [CGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAANNNGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_547#0 TTATTAGCGCGTGATGCACGCCAATGTTCGTAAGCCCGCGAAATCTGAGAAGACGCCGCG 60 consensus_547#1 ------------------------------------------------------------ consensus_547#0 GCGCAAGAAGCTCGTAGAGCAACAAAGCAACGCTATGGATATGTTCGTGACACCAAAACG 120 consensus_547#1 ------------------------------------------------------------ consensus_547#0 TCAGAAAAATGACGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCA 180 consensus_547#1 ---------------------------------------CGCTATGGATATGTTCGTGAC 21 ** * * * consensus_547#0 ACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGG 240 consensus_547#1 ACCAAAACGTCAGAAAAATGACGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGG 81 ** * * * ** ************************************** consensus_547#0 TAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAAGTTGTTGGAACTCA 300 consensus_547#1 TAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAANNNGTTGGAACTCA 141 ********************************************** *********** consensus_547#0 ACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGA 360 consensus_547#1 ACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGA 201 ************************************************************ consensus_547#0 ACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGA 420 consensus_547#1 ACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTAC---- 257 ******************************************************** consensus_547#0 TTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAA 480 consensus_547#1 ------------------------------------------------------------ consensus_547#0 TGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGG 540 consensus_547#1 ------------------------------------------------------------ consensus_547#0 TTTGTAATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATGTAAATATAAA 600 consensus_547#1 ------------------------------------------------------------ consensus_547#0 AATTGAATAGATAAACATAGTCATTAAAATTATAAAATGAATGAATAATAG 651 consensus_547#1 --------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |