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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_552#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 797 fasta sequence
[AGTTGTCCATCAGTATGTCGGCCAGGAACCGTCCGGACGCAACTTCAACGAGCTGGTGTTGGATTACAACAAGAAACCCCATAATCCCATGATCAACGCTGGCGCGATCCTAGTCTGTTCTCTCTTGAAGTCTCTGATCAAGCCTGAAATGACTTTAGCCGAAAAATTCGACTTCACGATGAATTATTTTAAGAGGCTAGCAGGTGGGGAGAACATGGGCTTCAACAACGCTGTATTTTTATCGGAACGAGAAGCGGCTGACAGAAATTACGCGCTTGGATTTTACATGAGGGAGTACAATTGTTATCCCGATAAATCAAATTTGAGAGAAATCATGGATTTCTATTTCCAGTGCTGCTCCATGGAGGCCAACTGCGACACGATGGCAGTAATGGCAGCCACTTTGGCTAACGNNGGCATTTGTCCCATAACCGAAGAAAAAGTTCTAAAACCTGACAGCGTTCGAGACGTTTTAAGTTTGATGCACAGCTGTGGAATGTACGATTACAGTGGCCAATTTGCATTCAAGGTTGGTATCCCAGCGAAGTCGGGAGTGTCGGGAAGTCTTTTGGTAGTGATACCAAACGTGATGGGCATTTGCACGTGGTCACCACCGTTGGATCCCCTCGGAAATTCTTGCAGAGGTGTCCAATTTTGCGAGGAACTCGTCTCCGAGTTTAATTTTCATAGGTACGACAACTTGAAGCATGCGACTAATAAAAAGGATCCGAGAAGGCACAAATACGAGACGAAAGGATTGTCGATCGTTAATCTTTTGTTCAGCGCGGCCAGTGGCG]
[+] EMBL BI511909 [AGTTGTCCATCAGTATGTCGGCCAGGAACCGTCCGGACGCAACTTCAACGAGCTGGTGTTGGATTACAACAAGAAACCCCATAATCCCATGATCAACGCTGGCGCGATCCTAGTCTGTTCTCTCTTGAAGTCTCTGATCAAGCCTGAAATGACTTTAGCCGAAAAATTCGACTTCACGATGAATTATTTTAAGAGGCTAGCAGGTGGGGAGAACATGGGCTTCAACAACGCTGTATTTTTATCGGAACGAGAAGCGGCTGACAGAAATTACGCGCTTGGATTTTACATGAGGGAGTACAATTGTTATCCCGATAAATCAAATTTGAGAGAAATCATGGATTTCTATTTCCAGTGCTGCTCCATGGAGGCCAACTGCGACACGATGGCAGTAATGGCAGCCACTTTGGCTAACGNNGGCATTTGTCCCATAACCGAAGAAAAAGTTCTAAA ]
[+] EMBL BI505565 [ CTGACAGAAATTACGCGCTTGGATTTTACATGAGGGAGTACAATTGTTATCCCGATAAATCAAATTTGAGAGAAATCATGGATTTCTATTTCCAGTGCTGCTCCATGGAGGCCAACTGCGACACGATGGCAGTAATGGCAGCCACTTTGGCTAACGGTGGCATTTGTCCCATAACCGAAGAAAAAGTTCTAAAACCTGACAGCGTTCGAGACGTTTTAAGTTTGATGCACAGCTGTGGAATGTACGATTACAGTGGCCAATTTGCATTCAAGGTTGGTATCCCAGCGAAGTCGGGAGTGTCGGGAAGTCTTTTGGTAGTGATACCAAACGTGATGGGCATTTGCACGTGGTCACCACCGTTGGATCCCCTCGGAAATTCTTGCAGAGGTGTCCAATTTTGCGAGGAACTCGTCTCCGAGTTTAATTTTCATAGGTACGACAACTTGAAGCATGCGACTAATAAAAAGGATCCGAGAAGGCACAAATACGAGACGAAAGGATTGTCGATCGTTAATCTTTTGTTCAGCGCGGCCAGTGGCG]
consensusID : consensus_552#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 672 fasta sequence
[TTTGCACGTGGTCACCACCGTTGGATCCCCTCGGAAATTCTTGCAGAGGTGTCCAATTTTGCGAGGAACTCGTCTCCGAGTTTAATTTTCATAGCACCTACTATGATCACAGGTACGACAACTTGAAGCATGCGACTAATAAAAAGGATCCGAGAAGGCACAAATACGAGACGAAAGGATTGTCGATCGTTAATCTTTTGTTCAGCGCGGCCAGTGGCGATGTCACAGCGATGAGAAGGCATCGATTGAGCGGTATGGATATGACATTGTCGGATTACGACGGTAGGACAGCTTTGCATTTAGCTTCCAGTGAGGGACATTTAGATTGTGTCGAATTTCTTATCGAGCAGTGTGCAGTTCCTCACGATCCTAAGGACAGGTGGGGAAAGAGGCCGATCGATGAAGCAGAAACATTTGGACACATGCAAGTAGTAGAATATCTGAATAATTACGCTTTGGCCCGAAAAACTGAAATAGAAAATGAAGAAAAGGAGAATAACAATAATGATGAAAGGAATTCCCGAACAGTCGCTGAATCTGCAATTCAAACGCCATTACCATAAGATTATTGCGGCATTAGATAGGATATTTATTTTTGGGAAGATACACGGTACGATGATTGATTGAACAAAAAAATGGAACGCGTGATATAATTATAACAAAAAAAAAAAA]
[+] EMBL BI503157 [TTTGCACGTGGTCACCACCGTTGGATCCCCTCGGAAATTCTTGCAGAGGTGTCCAATTTTGCGAGGAACTCGTCTCCGAGTTTAATTTTCATAGCACCTACTATGATCACAGGTACGACAACTTGAAGCATGCGACTAATAAAAAGGATCCGAGAAGGCACAAATACGAGACGAAAGGATTGTCGATCGTTAATCTTTTGTTCAGCGCGGCCAGTGGCGATGTCACAGCGATGAGAAGGCATCGATTGAGCGGTATGGATATGACATTGTCGGATTACGACGGTAGGACAGCTTTGCATTTAGCTTCCAGTGAGGGACATTTAGATTGTGTCGAATTTCTTATCGAGCAGTGTGCAGTTCCTCACGATCCTAAGGACAGGTGGGGAAAGAGGCCGATCGATGAAGCAGAAACATTTGGACACATGCAAGTAGTAGAATATCTGAATAATTACGCTTTGGCCCGAAAAACTGAAATAGAAAATGAAGAAAAGGAGAATAACAATAATGATGAAAGGAATTCCCGAACAGTCGCTGAATCTGCAATTCAAACGCC ]
[+] EMBL BI507751 [ AGTTCCTCACGATCCTAAGGACAGGTGGGGAAAGAGGCCGATCGATGAAGCAGAAACATTTGGACACATGCAAGTAGTAGAATATCTGAATAATTACGCTTTGGCCCGAAAAACTGAAATAGAAAATGAAGAAAAGGAGAATAACAATAATGATGAAAGGAATTCCCGAACAGTCGCTGAATCTGCAATTCAAACGCCATTACCATAAGATTATTGCGGCATTAGATAGGATATTTATTTTTGGGAAGATACACGGTACGATGATTGATTGAACAAAAAAATGGAACGCGTGATATAATTATAACAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_552#0 AGTTGTCCATCAGTATGTCGGCCAGGAACCGTCCGGACGCAACTTCAACGAGCTGGTGTT 60
consensus_552#1 -------------------------------TTTGCACGTGGTCACCAC-------CGTT 22
* * *** * ** ***
consensus_552#0 GGATTACAACAAGAAACCCCATAATCCCATGATCAACGCTGGCGCGATCCTAGTCT---- 116
consensus_552#1 GGATCCCCTCGGAAATTCTTGCAGAG--GTGTCCAAT-TTTGCGAGGAACTCGTCTCCGA 79
**** * * ** * * ** *** * *** * ** ****
consensus_552#0 GTTCTCTCTTGAAGTCTCTGATCAAGCCTGAAATGACTTTAGCC-GAAAAATTCGACTTC 175
consensus_552#1 GTTTAATTTTCATAGCACCTACTATGATCACAGGTACGACAACTTGAAGCATGCGACT-- 137
*** * ** * * * * * * * ** * * *** ** *****
consensus_552#0 ACGATGAATTATTTTAAGAGGCTAGCAGGTGGGGAGAACATGGGCTTCAACAACGCTGTA 235
consensus_552#1 AATAAAAAGGATCCGAGAAGGCACAAATACGAGACGAA-AGGATTGTCGATCGT-TAATC 195
* * ** ** * **** * * * *** * * ** * *
consensus_552#0 TTTTTATCGGAACGAGAAGCGGCTGACAGAAATTACGCGCTTGGATTTTACATGAGGGAG 295
consensus_552#1 TTTTGTTCAGCGCGGCCAGTGGC-GATGTCACAGCGATGAGAAGGCATCGATTGAGCG-G 253
**** ** * ** ** *** ** * * * * **** * *
consensus_552#0 TACAATTGTTATCCCGATAAATCAAATTTGAGAGAAATCATGGATTTCTATTTCCAGTGC 355
consensus_552#1 TATGGATATGACATTGTCGGATTACGACGGTAGGACAGCTTTGCATTTAGCTTCCAGTGA 313
** * * * * ** * * ** * * * * ** ********
consensus_552#0 TGCTCCATGGAGGCCAACTGCGACACGATGGC-AGTAATG-GCAGCCACTTTGGCTAACG 413
consensus_552#1 GGGAC-ATTTAGATTGTGTCGAATTTCTTATCGAGCAGTGTGCAGTTCCTCACGATCCTA 372
* * ** ** * * * * ** * ** **** ** * *
consensus_552#0 NNGGCATTTGTCCCATAACCGAAGAAAAAGTTCTAAAACCTGACAGCGTTCGAGACGTTT 473
consensus_552#1 AGGACAGGTG-------GGGAAAGAGGCCGATCGATGAAGCAGAAACATTTG-GACACAT 424
* ** ** **** * ** * * * * ** * *** *
consensus_552#0 TAAGTTTGATGCACAGCTGTGGAATGTACGATTACAGTGGCCAATTTGCATTCAAGGTTG 533
consensus_552#1 GCAAGTAGTAGAATATCTGAATAAT-TACGCTTTGGCCCGAAAAACTGAAATAGAAAATG 483
* * * * * * *** *** **** ** * ** ** * * * **
consensus_552#0 GTATCCCAGCGAA-GTCGGGAGTGTCGGGAAGTCTTTTGGTAGTGATACCAAACGTGATG 592
consensus_552#1 AAGAAAAGGAGAATAACAATAATGATGAAAGGAATTCCCGAACAGTCGCTGAATCTGCA- 542
* *** * * ** * * * ** * * * * ** **
consensus_552#0 GGCATTTGCACGTGGTCACCACCGTTGGATCCCCTCGGAAATTCTTGCAGAGGTGTCCAA 652
consensus_552#1 ---ATTCAAAC---GCCATTACCATAAGATTATTGCGGCA---TTAGATAGGATATTTAT 593
*** ** * ** *** * *** *** * * * * * * *
consensus_552#0 TTTTGCGAGGA-ACTCGTCTCCGAGTTTAATTTTCATAGGTACGACAACTTGAAGCATGC 711
consensus_552#1 TTTTGGGAAGATACACGGTACGATGATTGATT-------GAACAAAAAAATGGAACGCGT 646
***** ** ** ** ** * * ** *** * ** * ** ** * * *
consensus_552#0 GAC-TAATAAAAAGGATCCGAGAAGGCACAAATACGAGACGAAAGGATTGTCGATCGTTA 770
consensus_552#1 GATATAATTATAACAAAAAAAAAAAA---------------------------------- 672
** **** * ** * * **
consensus_552#0 ATCTTTTGTTCAGCGCGGCCAGTGGCG 797
consensus_552#1 ---------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |