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Apis mellifera
cluster # 691 cluster # 691       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_691#0 length = 869 sequences # 2  
consensus_691#1 length = 492 sequences # 1  

consensusID : consensus_691#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 869
fasta sequence
                              [TTTACATTATCATTAATGCAGTGTTTTCCTTGAAAGCTAGTTCCTTTAAAGAAATACTGAAAAATAAGGTACATGTTTTTTTGAGTATCTAATCAGATTTTTAAATGGTGTTGCATGATGCAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTATAATTCCAATTTCACCAAGTCATATTGAGAGGGAAAAAACACCACCAAAACCAATATATTTAGAAGGTGCACTTCCTCCACAATGTGAATTGCTTGTAACAGATTCAGAAACTCAAGCTCAGAAAGCGGAAGAAGATGTAGAGGCACCTGTTGTACTTTCAGGCAAAATGACTCTCTCTCTCATCAGTCTCGACCAAAATGCAGCTGAAATTGATGAAGAAGATCAAGAAAAAAATGCAAATGATATAAGAATCTTGAATTTAAAAGATACAGAAAAAGTGTTAAATATTAAAAAAAATAATAAAGAGGAAATTAAGAATAAAGATGAA]

[+] EMBL BI516172             [TTTACATTATCATTAATGCAGTGTTTTCCTTGAAAGCTAGTTCCTTTAAAGAAATACTGAAAAATAAGGTACATGTTTTTTTGAGTATCTAATCAGATTTTTAAATGGTGTTGCATGATGCAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACC                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI514622             [                                                                                                                                                                                                                                                                                                                                                          GATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTATAATTCCAATTTCACCAAGTCATATTGAGAGGGAAAAAACACCACCAAAACCAATATATTTAGAAGGTGCACTTCCTCCACAATGTGAATTGCTTGTAACAGATTCAGAAACTCAAGCTCAGAAAGCGGAAGAAGATGTAGAGGCACCTGTTGTACTTTCAGGCAAAATGACTCTCTCTCTCATCAGTCTCGACCAAAATGCAGCTGAAATTGATGAAGAAGATCAAGAAAAAAATGCAAATGATATAAGAATCTTGAATTTAAAAGATACAGAAAAAGTGTTAAATATTAAAAAAAATAATAAAGAGGAAATTAAGAATAAAGATGAA]


>consensus_691#0 TTTACATTATCATTAATGCAGTGTTTTCCTTGAAAGCTAGTTCCTTTAAAGAAATACTGA AAAATAAGGTACATGTTTTTTTGAGTATCTAATCAGATTTTTAAATGGTGTTGCATGATG CAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAAT ATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATA ATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGAC GCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATAT CACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTC AGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAG TCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTA TAATTCCAATTTCACCAAGTCATATTGAGAGGGAAAAAACACCACCAAAACCAATATATT TAGAAGGTGCACTTCCTCCACAATGTGAATTGCTTGTAACAGATTCAGAAACTCAAGCTC AGAAAGCGGAAGAAGATGTAGAGGCACCTGTTGTACTTTCAGGCAAAATGACTCTCTCTC TCATCAGTCTCGACCAAAATGCAGCTGAAATTGATGAAGAAGATCAAGAAAAAAATGCAA ATGATATAAGAATCTTGAATTTAAAAGATACAGAAAAAGTGTTAAATATTAAAAAAAATA ATAAAGAGGAAATTAAGAATAAAGATGAA



consensusID : consensus_691#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 492
fasta sequence
                              [TGTTGGAGGGGCGCGTTGCTTGATGCAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTATAATTCNAATTTCACCAAGTCATATTGAGNGGGAAAAAACACCACCA]

[+] EMBL BI513415             [TGTTGGAGGGGCGCGTTGCTTGATGCAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTATAATTCNAATTTCACCAAGTCATATTGAGNGGGAAAAAACACCACCA]


>consensus_691#1 TGTTGGAGGGGCGCGTTGCTTGATGCAAGGTTTGCACAATTAGAACACACACGTATTTAT ATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGT ATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGA GACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGA ATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAA GAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAAC ATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAAT AAGGGTAGTAGACCTACTACTCCTATAATTCNAATTTCACCAAGTCATATTGAGNGGGAA AAAACACCACCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_691#0      TTTACATTATCATTAATGCAGTGTTTTCCTTGAAAGCTAGTTCCTTTAAAGAAATACTGA 60
consensus_691#1      ------------------------------------------------------------
                                                                                 

consensus_691#0      AAAATAAGGTACATGTTTTTTTGAGTATCTAATCAGATTTTTAAATGGTGTTGCATGATG 120
consensus_691#1      -----------------------------------TGTTGGAGGGGCGCGTTGCTTGATG 25
                                                          **        * ***** *****

consensus_691#0      CAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAAT 180
consensus_691#1      CAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAAT 85
                     ************************************************************

consensus_691#0      ATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATA 240
consensus_691#1      ATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATA 145
                     ************************************************************

consensus_691#0      ATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGAC 300
consensus_691#1      ATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGAC 205
                     ************************************************************

consensus_691#0      GCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATAT 360
consensus_691#1      GCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATAT 265
                     ************************************************************

consensus_691#0      CACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTC 420
consensus_691#1      CACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTC 325
                     ************************************************************

consensus_691#0      AGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAG 480
consensus_691#1      AGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAG 385
                     ************************************************************

consensus_691#0      TCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTA 540
consensus_691#1      TCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTA 445
                     ************************************************************

consensus_691#0      TAATTCCAATTTCACCAAGTCATATTGAGAGGGAAAAAACACCACCAAAACCAATATATT 600
consensus_691#1      TAATTCNAATTTCACCAAGTCATATTGAGNGGGAAAAAACACCACCA------------- 492
                     ****** ********************** *****************             

consensus_691#0      TAGAAGGTGCACTTCCTCCACAATGTGAATTGCTTGTAACAGATTCAGAAACTCAAGCTC 660
consensus_691#1      ------------------------------------------------------------
                                                                                 

consensus_691#0      AGAAAGCGGAAGAAGATGTAGAGGCACCTGTTGTACTTTCAGGCAAAATGACTCTCTCTC 720
consensus_691#1      ------------------------------------------------------------
                                                                                 

consensus_691#0      TCATCAGTCTCGACCAAAATGCAGCTGAAATTGATGAAGAAGATCAAGAAAAAAATGCAA 780
consensus_691#1      ------------------------------------------------------------
                                                                                 

consensus_691#0      ATGATATAAGAATCTTGAATTTAAAAGATACAGAAAAAGTGTTAAATATTAAAAAAAATA 840
consensus_691#1      ------------------------------------------------------------
                                                                                 

consensus_691#0      ATAAAGAGGAAATTAAGAATAAAGATGAA 869
consensus_691#1      -----------------------------
                                                  




Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)