These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_709#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 574 fasta sequence [CAAGGGAAACACCGTGTGTATATGTATATATGTATGCGCGTGTGTACGTGGTGTGTACGTGTCAGTCGAGAATTTTAAAAAACAAGAGTTGTGGTTAGGAAGTTTTTCGGTGTCGGTGTTTCTCAATCACAAAATTAACACGTTTGATTATGGTTCACAGATGGAACAGTGCGTTTCATCATCATCGTGATCTATCAAATTGACTGGTACGAGGATCCATCGACACGGATCACCGACACTGTTTCTGTTCAGCCGCGACAGGATTCACAGAACCGACAGACGCCTTCTTCGACGACGACCTCTTCCCATCCTGCTTCGAGCCTGCGTTGCCGCACTCCTTGCTTCCGCTCGACACCTTGCACGACTTCCCGCCGACCTTCTGCTCCTTGCTCGACTCCGTCACCTTGTCCAGCTCGGCCATCGCCTCCTGTATAGCGTTCTCCAGCTGCATGTTCAATTTACGACTTCACCTAAACGGTCTTCGCGCAGGGTGGAATGCATGGAATGGATGGAGTCCAGCTTTCGCTTGATTCCGCGGCCGAGGGCATGTTCCCTGCCCTCGCACCTCACTGTG] [+] EMBL BI508509 [CAAGGGAAACACCGTGTGTATATGTATATATGTATGCGCATGTGT GTGTGTACGTGTCAGTCGAGAATTTTAAAAAACAAGAGTTGTGG AGGAAGTTTTTCGGTGTCGGTGTTTCTCAATCACAAAATTAACACGTTTGATTATGGTTCACAGATGGAACAGTGCGTTTCATCATCATCGTGATCTATCAAATTGACTGGTACGAGGATCCATCGACACGGATCACCGACACTGTTTCTGTTCAGCCGCGACAGGATTCACAGAACCGACAGACGCCTTCTTCGATGACGACCTCTTCCCATCCTGCTTCGAGCCTGCGTTGCCGCACTCCTTGCTTCCGCTCGACACCTTGCACGACTTCCCGCCGACCTTCTGCTCCTTGCTCGACTCCGTCACCTTGTCCAGCTCAGCCATCGCCTCCTGTATAGCGTTCTCCAGCTGCATGTTCAATTTACGACTTTTCCTAAACTTTTTTCGCGCACGGTGTTA ] [-] EMBL BI507708 [ ATGCGCGTGTGTACGTGTTATGTACGTGTCAGTCGAGAATTTTAAAAAACAAGAGTTGTAGTTCGGAAGTTTTTCGGTGTCGGTGTTTCTCAATCACAAAATTAACACGTTTGATTATGGTTCACAGATGGAACAGTGCGTTT ATCATCATCGTGATCTATCAAATTGACTGGTACGAGGATCCATCGACACGGATCACCGACACTGTTTCTGTTCAGCCGCGACAGGATTCACAGAACCGACAGACGCCTTCTTCGACGACGACCTCTTCCCATCCTGCTTCGAGCCTGCGTTGCCGCACTCCTTGCTTCCGCTCGACACCTTGCACGACTTCCCGCCGACCTTCTGCTCCTTGCTCGACTCCGTCACCTTGTCCAGCTCGGCCATCGCCTCCTGTATAGCGTTCTCCAGCTGCATGTTCAATTTACGACTTCATCT TGGTCTTCATGCAGGGTAGAATGCATGGAATGGATGGAGTCCAGCTTTCGCTTGATTCCGCGGCCGAGGGCATGTTCCCTGCCCTCGCACCTCACTGTG] consensusID : consensus_709#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 446 fasta sequence [GAGTCGACGGTTACTACTGGGATCCAGATCTATACGTCAGAGACGTTGAAGCAAGCCGAAGGTGTGGTGAGCACAGTGAGGTGCGAGGGCAGGGAACATGCCCTCGGCCGCGGAATCAAGCGAAAGCTGGACTCCATCCATTCCATGCATTCTACCCTGCATGAAGACCAAGATGTAGCCGAGGCAAAGTCGGAGGAGAAGAGCCAGAGGAAACTGGAGGTGGGTGAGCTAGTATGGGGCGCCGCAAGAGGAAGTCCGGCGTGGCCGGGCAAGGTCGAGTCTTNGNGCCCACCGGGCACCATGACGGTGTGGGTCCGTTGGTACGGGGGCGGGGGCGGTCGGAGCCAGGTCGAGGTCAAGGCTCTCAAGTCCCTCTCCGAAGGCCTCGAGGCGCACCACCGTGCGCGAAAAAAGTTTAGGAAAAGTCGTAAATTGAACATGCAGCT] [+] EMBL BI513703 [GAGTCGACGGTTACTACTGGGATCCAGATCTATACGTCAGAGACGTTGAAGCAAGCCGAAGGTGTGGTGAGCACAGTGAGGTGCGAGGGCAGGGAACATGCCCTCGGCCGCGGAATCAAGCGAAAGCTGGACTCCATCCATTCCATGCATTCTACCCTGCATGAAGACCAAGATGTAGCCGAGGCAAAGTCGGAGGAGAAGAGCCAGAGGAAACTGGAGGTGGGTGAGCTAGTATGGGGCGCCGCAAGAGGAAGTCCGGCGTGGCCGGGCAAGGTCGAGTCTTNGNGCCCACCGGGCACCATGACGGTGTGGGTCCGTTGGTACGGGGGCGGGGGCGGTCGGAGCCAGGTCGAGGTCAAGGCTCTCAAGTCCCTCTCCGAAGGCCTCGAGGCGCACCACCGTGCGCGAAAAAAGTTTAGGAAAAGTCGTAAATTGAACATGCAGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_709#0 CAAGGGAAACACCGTGTGTATATGTATATATGTATGCGCGTGTGTACGTGGTGTGTACGT 60 consensus_709#1 -----------------------GAGTCGACGGTTACTACTGGGATCCAGATCTATACGT 37 * * * * * * ** * * * * * ***** consensus_709#0 GTCAGTCGAGAATTTTAAAAAACAAGAGTTGTGGTTAGGAAGTTTTTCGGTGTCGGTGTT 120 consensus_709#1 CAGAGACG----TTGAAGCAAGCCGAAGGTGTGGTGAGCA-------CAGTGA-GGTG-- 83 ** ** ** * ** * ** ****** ** * * *** **** consensus_709#0 TCTCAATCACAAAATTAACACGTTTGATTATGGTTCACAGATGGAACAGTGCGTTTCATC 180 consensus_709#1 ---CGAGGGCAGGGAACATGCCCTCGGCCGCGGA--ATCAAGCGAAAGCTGGACTCCATC 138 * * ** * * * * ** * * *** ** * **** consensus_709#0 ATCATCGTGATCTATCAAATTGACTGGTACGAGGATCCATCGACACGGATCACCGACACT 240 consensus_709#1 CATTCCATG------CATTCTACCCTGCATGAAGACCAA--GATGTAG----CCGAGGCA 186 * ** ** * * * * ** ** * * ** * **** * consensus_709#0 GTTTCTGTTCAGCCGCGACAGGATTCACAGAACCGACAGACGCCTTCTTCGACGACGAC- 299 consensus_709#1 AAGTCGGAGGAGAAGAGCCAGAGGAAACTGGA--GGTGGGTGAGCTAGTATGGGGCGCCG 244 ** * ** * * *** ** * * * * * * * * ** * consensus_709#0 CTCTTCCCATCCTGCTTCGAGCCTGCGTTGCCGCACTCCTTGCTTCCGCTCGACACCTTG 359 consensus_709#1 CAAGAGGAAGTCCGGCGTGGCCGGGCAAGGTCG-AGTCTTNGNGCCCACCGGGCACCATG 303 * * * * * * ** * ** * ** * * ** * * **** ** consensus_709#0 CACGACTTCCCGCCGACCTTCTGCTCCTTGCTCGACTCCGTCACCTTGTCCAGCTCGGCC 419 consensus_709#1 -ACGGT-----GTGGGTCCGTTGGTACGGGGGCGGGGGCG--GTCGGAGCCAGGTCGAG- 354 *** * * * ** * * * ** ** * **** *** consensus_709#0 ATCGCCTCCTGTATAGCGTTCTCCAGCTGCATGTTCAATTTACGACTTCACCTAAACGGT 479 consensus_709#1 GTCAAGGCTCTCAAGTCCCTCTCCGAAGGCCT-CGAGGCGCACCACCGTGCGCGAAAAAA 413 ** * * * ***** ** * ** ** * ** consensus_709#0 CTTCGCGCAGGGTGGAATGCATGGAATGGATGGAGTCCAGCTTTCGCTTGATTCCGCGGC 539 consensus_709#1 GTTTAGGAAAAGTCG--TAAATTGAAC--ATGCAGCT----------------------- 446 ** * * ** * * ** *** *** ** consensus_709#0 CGAGGGCATGTTCCCTGCCCTCGCACCTCACTGTG 574 consensus_709#1 ----------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |