These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_729#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 683 fasta sequence [TTAATCCTCGGTGTACCCTACACGTGGCTAGTAAGGTGGTCTCGTCGACCGGGCGAAGTCGTCGGATAAGTCGTCGAGGAAGGGAAGAGTGAATGGGGAAGAAAAAGAAGAGAAAGAACGGGAAGAAGGAAATTAAAACAAAAAAGGGAAGATCTGTTTGCGAGGGAACAGAAGAAGAAGAACAGATTTCAGCCGAGAAGACGAGAATTAGAGAAGCGGGCTTCGAAAAACGTATCGACGATTTCTCGACCGATATTTTGGAACGTGCGATGCTAGCATTAAAAAATAAAATAAAA-GAAATAAACGCACTCAATCGTTGAGAAGAAAAATGGATAACTGGCGTTAAGAATATTCCGATCGGCAGACGGACGTCGCGTATTATTAATAACAGTTCTGCGATCGACTTTCAGCTGACTCTCAAACACGAACCGAGAATGACAGACACGCGTATATACACGTATATACACACACACACCACGTACACGCGCGCATGCACACCCAAAGACATAATAAGGAGAGGGAGACTCACACAGGAGAATTGGGAAAAAAAAAAATAAGGAGGAAAGATCATAGCTGTGTATGCATATACACCACACTGTACACTAAGATTCTTAATGTTGTAACACTGTAACTCTATTAACTGATTCATAATGCAGTTGTATTCCATAGTAAGTTAAACAAAG] [+] EMBL BI507593 [TTAATCCTCGGTGTACCCTACACGTGGCTAGTAAGGTGGTCTCGTCGACCGGGCGAAGTCGTCGGATAAGTCGTCGAGGAAGGGAAGAGTGAATGGGGAAGAAAAAGAAGAGAAAGAACGGGAAGAAGGAAATTAAAACAAAAAAGGGAAGATCTGTTTGCGAGGGAACAGAAGAAGAAGAACAGATTTCAGCCGAGAAGACGAGAATTAGAGAAGCGGGCTTCGAAAAACGTATCGACGATTTCTCGACCGATATTTTGGAACGTGCGATGCTAGCATTAAAAAATAAAATAAAATGAAATAAACGCACTCAATCGTTGAGAAGAAAAATGGATAACTGGCGTTAAGAATATTCCGATCGGCAGACGGACGTCGCG TTATTAATAACAGTTCTGCGATCGACTTTCAGCTGACTCTCAAACACGAACCGAGAATGACAGACACGCGTATATACACGTATATACACACACACACCACGTACACGCGCGCATGCACACCCAAAGACATAATAAGGAGAGGGAGAC ] [+] EMBL BI510022 [ GTATCGACGATTTCTCGACCGATATTTTGGAACATGCGATGCTAGCATTAAAAAATAAAATA AAATAAACGCACTCAATCGTTGAGAAGAAAAATGGATAACTGGCGTTAAGAATATTCCGATCGGCAGACGTACGTCGCGTATTATTAATAACAGTTCTGCGATCGACTTTCAGCTGACTCTCAAACACGAACCGAGAATGACAGACACGCGTATATACACGTATATACACACACACACCACGTACACGCGCGCATGCACACCCAAAGACATAATAAGGAGAGGGAGACTCACACAGGAGAATTGGGAAAAAAAAAAATAAGGAGGAAAGATCATAGCTGTGTATGCATATACACCACACTGTACACTAAGATTCTTAATGTTGTAACACTGTAACTCTATTAACTGATTCATAATGCAGTTGTATTCCATAGTAAGTTAAACAAAG] consensusID : consensus_729#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 282 fasta sequence [CTTTTTTCAATACGTCTACCAGTGGCACCAACTACGGGGCAACGATTTCTTTAATCCTCGGTGTACCCTACACGTGGCTAGTAAGGTGGTCTCGTCGACCGGGCGAAGTCGTCGGATAAGTCGTCGAGGAAGGGAAGAAAGAAAGGAGAAAAGAAGAAAGGAAGTAAACGGAGTAAGAAAAAGGAGAAGAAAGGTGCGTGTGCAAGCCCATCTGCCCGCCAACGAGACCCCCCGAAGAAATCAAGCGACGAACAACGGAAAGCGTTATTTCGCGAAAAAAAA] [+] EMBL BI515713 [CTTTTTTCAATACGTCTACCAGTGGCACCAACTACGGGGCAACGATTTCTTTAATCCTCGGTGTACCCTACACGTGGCTAGTAAGGTGGTCTCGTCGACCGGGCGAAGTCGTCGGATAAGTCGTCGAGGAAGGGAAGAAAGAAAGGAGAAAAGAAGAAAGGAAGTAAACGGAGTAAGAAAAAGGAGAAGAAAGGTGCGTGTGCAAGCCCATCTGCCCGCCAACGAGACCCCCCGAAGAAATCAAGCGACGAACAACGGAAAGCGTTATTTCGCGAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_729#0 --------------------------------------------------TTAATCCTCG 10 consensus_729#1 CTTTTTTCAATACGTCTACCAGTGGCACCAACTACGGGGCAACGATTTCTTTAATCCTCG 60 ********** consensus_729#0 GTGTACCCTACACGTGGCTAGTAAGGTGGTCTCGTCGACCGGGCGAAGTCGTCGGATAAG 70 consensus_729#1 GTGTACCCTACACGTGGCTAGTAAGGTGGTCTCGTCGACCGGGCGAAGTCGTCGGATAAG 120 ************************************************************ consensus_729#0 TCGTCGAGGAAGGGAAGAGTGAATGGGGAAGAAAAAGAAGAGAAAGAACGGGAAGAAGGA 130 consensus_729#1 TCGTCGAGGAAGGGAAGAAAGAAAGGAGAAAAGAAGAAAGGAAGTAAACGGAGTAAGAAA 180 ****************** *** ** *** * ** *** * ***** * * consensus_729#0 AATTAAAACAAAAAAGGGA----AGATCTGTTTGCGAGGGAACAGAAGAAGAAGAACAGA 186 consensus_729#1 AAGGAGAAGAAAGGTGCGTGTGCAAGCCCATCTGCCCGCCAACGAGACCCCCCGAAGAAA 240 ** * ** *** * * * * * *** * *** * *** * * consensus_729#0 TTTCAGCCGAGAAGACGAGAATTAGAGAAGCGGGCTTCGAAAAACGTATCGACGATTTCT 246 consensus_729#1 TC-------AAGCGACGAACAACGGAAAGCGTTATTTCGCGAAAAAAAA----------- 282 * * ***** * ** * **** *** * consensus_729#0 CGACCGATATTTTGGAACGTGCGATGCTAGCATTAAAAAATAAAATAAAAGAAATAAACG 306 consensus_729#1 ------------------------------------------------------------ consensus_729#0 CACTCAATCGTTGAGAAGAAAAATGGATAACTGGCGTTAAGAATATTCCGATCGGCAGAC 366 consensus_729#1 ------------------------------------------------------------ consensus_729#0 GGACGTCGCGTATTATTAATAACAGTTCTGCGATCGACTTTCAGCTGACTCTCAAACACG 426 consensus_729#1 ------------------------------------------------------------ consensus_729#0 AACCGAGAATGACAGACACGCGTATATACACGTATATACACACACACACCACGTACACGC 486 consensus_729#1 ------------------------------------------------------------ consensus_729#0 GCGCATGCACACCCAAAGACATAATAAGGAGAGGGAGACTCACACAGGAGAATTGGGAAA 546 consensus_729#1 ------------------------------------------------------------ consensus_729#0 AAAAAAAATAAGGAGGAAAGATCATAGCTGTGTATGCATATACACCACACTGTACACTAA 606 consensus_729#1 ------------------------------------------------------------ consensus_729#0 GATTCTTAATGTTGTAACACTGTAACTCTATTAACTGATTCATAATGCAGTTGTATTCCA 666 consensus_729#1 ------------------------------------------------------------ consensus_729#0 TAGTAAGTTAAACAAAG 683 consensus_729#1 ----------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |