These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_747#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 571 fasta sequence [TTTTTTTTTTATCGTTTTCGGATTTTAATATCGTGCTTTTGGAAATAAATAACAATGTCTTTCAGTAAAATAATTGTCCGGTCATTTTTCAGTAGTACTGCTGCTCAACAATTGGTTAAGCCTCCGATTCAAGTATTTGGCATAGGAGGACGATATGCTACAGCACTTTATTCAGCAGGTTCAAAACAAAAAACATTAAATAATATTGAAAAAGATCTTCTTAAATTTCAAGATCTCATGAAGCAAGATCAAAAATTGAATGAATTTGTGAAAAATCCAGCAATAAAAAGAAAAGAGAAAGTAGAAGGACTTAAATCAATTGGAGGAAAAATTAGTCTGAAAAGTGAAACAATAAATTTATTAGNTTTATTAGCAGAAAATGGTCGACTTTCACAAATTAACAATGTAATTAATACATTTAAATTATTAATGGCTGCTACTAGAGGTGAAGTTCCTTGTGAAGTAGTAACTGCAAAACCTCTTGATGCTGAAATGACATCTAAGCTTCAAACAGCTTTGAAAGGATTTTTAAGTAAAGGTCAATCTATTATGCTTACTGCAAAAGTTGATC] [+] EMBL BI504372 [TTTTTTTTTTATCGTTTTCGGATTTTAATATCGTGCTTTTGGAAATAAATAACAATGTCTTTCAGTAAAATAATTGTCCGGTCATTTTTCAGTAGTACTGCTGCTCAACAATTGGTTAAGCCTCCGATTCAAGTATTTGGCATAGGAGGACGATATGCTACAGCACTTTATTCAGCAGGTTCAAAACAAAAAACATTAAATAATATTGAAAAAGATCTTCTTAAATTTCAAGATCTCATGAAGCAAGATCAAAAATTGAATGAATTTGTGAAAAATCCAGCAATAAAAAGAAAAGAGAAAGTAGAAGGACTTAAATCAATTGGAGGAAAAATTAGTCTGAAAAGTGAAACAATAAATTTATTAGNTTTATTAGCAGAAAATGGTCGACTTTCACAAATTAACAATGTAATTAATACATTTAAATTA ] [+] EMBL BI512219 [ GCTCAACAATTGGTTAAGCCTCCGATTCAAGTATTTGGCATAGGAGGACGATATGCTACAGCACTTTATTCAGCAGGTTCAAAACAAAAAACATTAAATAATATTGAAAAAGATCTTCTTAAATTTCAAGATCTCATGAAGCAAGATCAAAAATTGAATGAATTTGTGAAAAATCCAGCAATAAAAAGAAAAGAGAAAGTAGAAGGACTTAAATCAATTGGAGGAAAAATTAGTCTGAAAAGTGAAACAATAAATTTATTAGCTTTATTAGCAGAAAATGGTCGACTTTCACAAATTAACAATGTAATTAATACATTTAAATTATTAATGGCTGCTACTAGAGGTGAAGTTCCTTGTGAAGTAGTAACTGCAAAACCTCTTGATGCTGAAATGACATCTAAGCTTCAAACAGCTTTGAAAGGATTTTTAAGTAAAGGTCAATCTATTATGCTTACTGCAAAAGTTGATC] consensusID : consensus_747#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 273 fasta sequence [TGGAATAATTTATTGTTTAATGACATACACATTGTTCATAAATTATTCTATATGAGTACTTTAACTTTGCTCATTTTACTGAATGTTATAAAAAGTAATCACAATGTTTCANNAATAATATCAAAATATTTTTTTTATTTTACTACNAACACTCATANNNATATATTTATCACCTATTGATATAATCATACCTCCCATAATGGAAGGATCAACTTTTGCAGTAAGCATAATAAATTGACCTTTACTTAAAAATCCTTTCAAAGCTGTTTGAAG] [+] EMBL BI511177 [TGGAATAATTTATTGTTTAATGACATACACATTGTTCATAAATTATTCTATATGAGTACTTTAACTTTGCTCATTTTACTGAATGTTATAAAAAGTAATCACAATGTTTCANNAATAATATCAAAATATTTTTTTTATTTTACTACNAACACTCATANNNATATATTTATCACCTATTGATATAATCATACCTCCCATAATGGAAGGATCAACTTTTGCAGTAAGCATAATAAATTGACCTTTACTTAAAAATCCTTTCAAAGCTGTTTGAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_747#0 TTTTTTTTTTATCGTTTTCGGATTTTAATATCGTGCTTTTGGAAATAAATAACAATGTCT 60 consensus_747#1 ------------------------------------------------------------ consensus_747#0 TTCAGTAAAATAATTGTCCGGTCATTTTTCAGTAGTACTGCTGCTCAACAATTGGTTAAG 120 consensus_747#1 ------------------------------------------------------------ consensus_747#0 CCTCCGATTCAAGTATTTGGCATAGGAGGACGATATGCTACAGCACTTTATTCAGCAGGT 180 consensus_747#1 ------------------------------------------------------------ consensus_747#0 TCAAAACAAAAAACATTAAATAATATTGAAAAAGATCTTCTTAAATTTCAAGATCTCATG 240 consensus_747#1 ----------------------------------------------------------TG 2 ** consensus_747#0 AAGCAAGATCAAAAATTGAATGAATTTGTGAAAAATCCAGCAATAAAAAGAAAAGAGAAA 300 consensus_747#1 GAATAA--TTTATTGTTTAATGA-CATACACATTGTTCATAAATTATTCTATATGAGTAC 59 * ** * * ** ***** * * * ** *** * * * *** * consensus_747#0 GTAGAAGGACTTAAATCAATTGGAGGAAAAATTAGTCTGAAAAGTGAAACAATAAATTTA 360 consensus_747#1 TT----TAACTTTGCTCATTTTACTGAA----TGTTATAAAAAGT--AATCACAA-TGTT 108 * **** *** ** *** * * * ****** ** * ** * * consensus_747#0 TTAGNTTTATTAGCAGAAAATGGTCGACTTTCACAAATTAACAATGTAATTAATACATTT 420 consensus_747#1 TCANNAATAATATCAAAATATTTTTTTTATTTTACTACNAACACTCATANNNATATATTT 168 * * * ** ** ** ** ** * ** * **** * * *** **** consensus_747#0 AAATTATTAATGGCTGCTACTAGAGGTGAAGTTCCTTGTGAAGTAGTAACTGCAAAACCT 480 consensus_747#1 A--TCACCTATTGATATAATCATACCTCCCATAATGGAAGGATCAACTTTTGCAGTAAGC 226 * * * ** * * * * * * * * * * **** * consensus_747#0 CTTGATGCTGAAATGACATCTAAGCTTCAAACAGCTTTGAAAGGATTTTTAAGTAAAGGT 540 consensus_747#1 ----ATAATAAATTGACCTTTA--CTTAAAAATCCTTTCAAAGCTGTTTGAAG------- 273 ** * ** **** * ** *** *** **** **** *** *** consensus_747#0 CAATCTATTATGCTTACTGCAAAAGTTGATC 571 consensus_747#1 ------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |