These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_762#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 668 fasta sequence [AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGATACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACAGCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTAGGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGCTATATAAATGATTATCCTACTGGAAGATTATTGAGGGATGCAAAATTATACGAAATTGGTGCTGGTAC] [+] EMBL BI507773 [AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGATACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACAGCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTAGGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGCTATATAAAT ] [+] EMBL BI504250 [ TTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACAGCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTAGGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTAGACGCAATTCAAATACTAGGTGGAAATGGCTATATAAATGATTATCCTACTGGAAGATTATTGAGGGATGCAAAATTATACGAAATTGGTGCTGGTAC] consensusID : consensus_762#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 498 fasta sequence [AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGATACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGCTATATA] [+] EMBL BI516894 [AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGATACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGCTATATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_762#0 AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGAT 60 consensus_762#1 AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGAT 60 ************************************************************ consensus_762#0 ACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACA 120 consensus_762#1 ACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATG-------- 112 **************************************************** consensus_762#0 GCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTA 180 consensus_762#1 ------------------------------------------------------------ consensus_762#0 GGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAA 240 consensus_762#1 ----------------------------------------ATTGTAAAGTTCCAGTTAAA 132 ******************** consensus_762#0 AATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAA 300 consensus_762#1 AATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAA 192 ************************************************************ consensus_762#0 CGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTT 360 consensus_762#1 CGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTT 252 ************************************************************ consensus_762#0 GAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAG 420 consensus_762#1 GAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAG 312 ************************************************************ consensus_762#0 GAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTA 480 consensus_762#1 GAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTA 372 ************************************************************ consensus_762#0 GTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTAC 540 consensus_762#1 GTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTAC 432 ************************************************************ consensus_762#0 ATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGC 600 consensus_762#1 ATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGC 492 ************************************************************ consensus_762#0 TATATAAATGATTATCCTACTGGAAGATTATTGAGGGATGCAAAATTATACGAAATTGGT 660 consensus_762#1 TATATA------------------------------------------------------ 498 ****** consensus_762#0 GCTGGTAC 668 consensus_762#1 -------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |