These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_792#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 667 fasta sequence [CGATCGAATGTGAATATAAGTCGATGGTTTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGAGTCCGCTACCAGAATATAATGCATTAGAAGCACGACAAGAAAAAATATTAGCACAACTTGCAGAACTTAAGAAACAAGTTTCAACACTTTCTGGATTTTTAAAACAGACAAATCAAGTTGCAGTAATCAATAAAAGTGTTACAAATCAGAAAGCAGTTAATGTAAATCTTATTATTAATGTAAATCCTAAAAGACCACCATATTTTATATCTGCATTACAAAATTTATGGGAAGACACTGATATTAAAGTACAAACTTATGTTCATTCAAGTATTAATAAAGAAGGATCTTTTGTTTATCAATCAACTACAAACTCTCCTAAAAATAATATTATTAATTTATCATTAATTTGGAAAGATGTTGAAGATCTGCAACTTGTATCTGGTCTACATAGTTATTGTATAACTGGTGAAACAAATTTTCTA] [+] EMBL BI508817 [CGATCGAATGTGAATATAAGTCGATGGTTTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGAGTCCGCTACCAGAATATAATGCATTAGAAGCACGACAAGAAAAAATATTAGCACAACTTGCAGAACTTAAGAAACAAGTTTCAACACTTTCTGGATTTTTAAAACAGACAAATCAAGTTGCAGTAATCAATAAAAGTGTTACAAATCAGAAAGCAGTTAATGTAAATCTTATTATTAATGTAAATCCTAAAAGACCACCATATTTTATATCTGCATTACAAAATTTATGGGAAGACACTGATATTAAAGTACAAACTTATGTTCATTCAAGTATTAATAAAGAAGGATCTTTTGTTTATCAATCAACTACAAACTCTCCTAAAAATAATATTATTAATTTATCATTAATTTGGAA ] [+] EMBL BI503912 [ GTCGATGGTTTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGAGTCCGCTACCAGAATATAATGCATTAGAAGCACGACAAGAAAAAATATTAGCACAACTTGCAGAACTTAAGAAACAAGTTTCAACACTTTCTGGATTTTTAAAACAGACAAATCAAGTTGCAGTAATCAATAAAAGTGTTACAAATCAGAAAGCAGTTAATGTAAATCTTATTATTAATGTAAATCCTAAAAGACCACCATATTTTATATCTGCATTACAAAATTTATGGGAAGACACTGATATTAAAGTACAAACTTATGTTCATTCAAGTATTAATAAAGAAGGATCTTTTGTTTATCAATCAACTACAAACTCTCCTAAAAATAATATTATTAATTTATCATTAATTTGGAAAGATGTTGAAGATCTGCAACTTGTATCTGGTCTACATAGTTATTGTATAACTGGTGAAACAAATTTTCTA] consensusID : consensus_792#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 281 fasta sequence [TTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGTAAGCATGGTAGCTACGAGTGTTTCTTCTGTCTCGAGCTTGTTGTGCATGACTCCTCCCAAAAAAAAA] [+] EMBL BI505447 [TTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGTAAGCATGGTAGCTACGAGTGTTTCTTCTGTCTCGAGCTTGTTGTGCATGACTCCTCCCAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_792#0 CGATCGAATGTGAATATAAGTCGATGGTTTTTTACAAATTAATCACGGAATAACGAACAA 60 consensus_792#1 ----------------------------TTTTTACAAATTAATCACGGAATAACGAACAA 32 ******************************** consensus_792#0 AATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATT 120 consensus_792#1 AATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATT 92 ************************************************************ consensus_792#0 GCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCA 180 consensus_792#1 GCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCA 152 ************************************************************ consensus_792#0 TACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAA 240 consensus_792#1 TACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAA 212 ************************************************************ consensus_792#0 GAGTCC------GCTACCAGAATATAATGCATTAGAAGCACGACAAGAAAAAATATTAGC 294 consensus_792#1 GTAAGCATGGTAGCTACGAGTGTTTCTTCTGTCTCGAGCTTGTTGTGCATGACTCCTCCC 272 * * ***** ** * * * * *** * * * * * * * consensus_792#0 ACAACTTGCAGAACTTAAGAAACAAGTTTCAACACTTTCTGGATTTTTAAAACAGACAAA 354 consensus_792#1 AAAAA----AAAA----------------------------------------------- 281 * ** * ** consensus_792#0 TCAAGTTGCAGTAATCAATAAAAGTGTTACAAATCAGAAAGCAGTTAATGTAAATCTTAT 414 consensus_792#1 ------------------------------------------------------------ consensus_792#0 TATTAATGTAAATCCTAAAAGACCACCATATTTTATATCTGCATTACAAAATTTATGGGA 474 consensus_792#1 ------------------------------------------------------------ consensus_792#0 AGACACTGATATTAAAGTACAAACTTATGTTCATTCAAGTATTAATAAAGAAGGATCTTT 534 consensus_792#1 ------------------------------------------------------------ consensus_792#0 TGTTTATCAATCAACTACAAACTCTCCTAAAAATAATATTATTAATTTATCATTAATTTG 594 consensus_792#1 ------------------------------------------------------------ consensus_792#0 GAAAGATGTTGAAGATCTGCAACTTGTATCTGGTCTACATAGTTATTGTATAACTGGTGA 654 consensus_792#1 ------------------------------------------------------------ consensus_792#0 AACAAATTTTCTA 667 consensus_792#1 ------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |