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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_796#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 578 fasta sequence
[TTCTTCTTTTTTTTTTCTCTTTTTTTTCTTTTTACTTTACTTTCCATCGTGGGAATTGTGCTCGAAAAGAAGTTCGAAAACTACCGTCGGATTACACTTAAAAGAGAATAGCAGATGGAAGAGCTGTTTAAATCTTAAAGGACTCTAAGGACGTGGCCGAGGATCGACGGGACAAAGCTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGATCGATACGAAAAATGATTCACGATTAATTTTATTACAAATTATCATCACGTTTCGACACGCATTTCAAATACAATATCTTTAAAAATTCTTCCAAGAGA]
[+] EMBL BI505306 [TTCTTCTTTTTTTTTTCTCTTTTTTTTCTTTTTACTTTACTTTCCATCGTGGGAATTGTGCTCGAAAAGAAGTTCGAAAACTACCGTCGGATTACACTTAAAAGAGAATAGCAGATGGAAGAGCTGTTTAAATCTTAAAGGACTCTAAGGACGTGGCCGAGGATCGACGGGACAAAGCTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGATCGATACGAAAAATGATTCACGATTAATTTTATTACAAATTATCATCACGTTTCGACACGCATTTCAAATACAATATCTTTAAAAATTCTTCCAAGAGA]
consensusID : consensus_796#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 541 fasta sequence
[CTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGACTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACTTCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCGAGTGCCTGCCTCCCGACCACTTGCCCAGGCCCAAGATCTTCGATGAAATCTCTCAGTTGGCCGGTTTCGCCCGACATTCGTAGACTGGGGGACCAACTGTCCCCGTCGCCGCTACCCTCGCCGTC]
[-] EMBL BI507297 [CTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGACTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACTTCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCGAGTGCCTGCCTCCCGACCACTTGCCCAGGCCCAAGATCTTCGATGAAATCTCTCAGTTGGCCGGTTTCGCCCGACATTCGTAGACTGGGGGACCAACTGTCCCCGTCGCCGCTACCCTCGCCGTC]
consensusID : consensus_796#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence
[GTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACTTCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCGAGTGCCTGCCTCCCGACCACTTGCCCAGGCCCAAGATCTTCGATGAAATCTCTCAGTTGGCCGGTTTCGCCCAACATTCGTAGACTGGGGGACCAAGAGCTTCCTTCGGAACTAGAGATCGAGTTGAGACTTCCGGCTGTGTCACTGGCCACCGATCCCGACTGTTTCCCGGATTCAAAGCGCTGATATGGTACAATCTCCTCGGAACGTTGTATGCTGCTCGGCGTGCTGTTGCGTTTCCGGCTCGATAAACCG]
[-] EMBL BI505982 [GTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACTTCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCGAGTGCCTGCCTCCCGACCACTTGCCCAGGCCCAAGATCTTCGATGAAATCTCTCAGTTGGCCGGTTTCGCCCAACATTCGTAGACTGGGGGACCAAGAGCTTCCTTCGGAACTAGAGATCGAGTTGAGACTTCCGGCTGTGTCACTGGCCACCGATCCCGACTGTTTCCCGGATTCAAAGCGCTGATATGGTACAATCTCCTCGGAACGTTGTATGCTGCTCGGCGTGCTGTTGCGTTTCCGGCTCGATAAACCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_796#1 CTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACA 60
consensus_796#2 ------------------------------------------------------------
consensus_796#0 ------------------------------------------------------------
consensus_796#1 CCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTT 120
consensus_796#2 ------------------------------------------------------------
consensus_796#0 ------------------------------------------------------------
consensus_796#1 TCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAAT 180
consensus_796#2 --------------------------------GTCACCTGCAGTATACAACCCCGGCAAT 28
consensus_796#0 ---TTCTTCTTTTTTTTTTCTCTTTTTTTTCTTTTTACTTTACTTTCCATCGTGGGAATT 57
* ** * * * ** * ** * *
consensus_796#1 TTTCTCTGAAGG----CTAACGACTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCT 236
consensus_796#2 TTTCTCTGAAGG----CTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCT 84
consensus_796#0 GTGCTCGAAAAGAAGTTCGAAAACTACCGTCGGATTACACTTAAAAGAGAA-TAGCAGAT 116
* *** ** * * * * * ** * ** * ** * *
consensus_796#1 GTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAA 296
consensus_796#2 GTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAA 144
consensus_796#0 GGAAGAGCTGTTTAAATCTTAAAGGACTCTAAGGACGTGGCCGAGGATCGACGGGACAAA 176
* * ** * * ** * * * * * * **
consensus_796#1 GCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACT 356
consensus_796#2 GCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACT 204
consensus_796#0 GCT--AAGGATGGTGGTCCACTGACCAGG-----GATATGTTGC-CAAACAGCTTATACC 228
*** ** * * ** * *** ** * * * * ** * * * * **
consensus_796#1 TCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCG 416
consensus_796#2 TCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCG 264
consensus_796#0 ACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCAT-G 287
* * * ** * **** * * ** * *** * ** *
consensus_796#1 AGTGCCTGCCTCCCGACCACTTGCCCAGG-----CCCAAGATCTTCGATGAAATCTCTCA 471
consensus_796#2 AGTGCCTGCCTCCCGACCACTTGCCCAGG-----CCCAAGATCTTCGATGAAATCTCTCA 319
consensus_796#0 AACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAA 347
* * * **** * * * * ** **** * * ** * * * *
consensus_796#1 GTTGGCCGGTTTC-------GCCCGACATTCGTAGACTGGG-GGACCAACTGTCCCCGTC 523
consensus_796#2 GTTGGCCGGTTTC-------GCCCAACATTCGTAGACTGGG-GGACCAAGAGCTTCCTTC 371
consensus_796#0 CCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTG 407
* * *** * * ** * ** * * *** * * * * *
consensus_796#1 GCCGCTACCCTCGCCGTC------------------------------------------ 541
consensus_796#2 GGAACTAGAGATCGAGTTGAGACTTCCGGCTGTGTCACTGGCCACCGATCCCGACTGTTT 431
consensus_796#0 GCTGCTGTCGTTTTCGCT-----TTCGCGATGCATTTCTTCCCGTTCA-CCAAATAAACT 461
* ** *
consensus_796#1 ------------------------------------------------------------
consensus_796#2 CCCGGATTCAAAGC---GCTGATATGGTACAATCTCCTCGGAACGTTGTAT-GCTGCTCG 487
consensus_796#0 TTCACGTAGGAAGCTGGATCGATACGAAAAATGATTCACGATTAATTTTATTACAAATTA 521
consensus_796#1 ---------------------------------------------------------
consensus_796#2 GCGTGCTGTTGCGTTTCCGGCTCGATAAACCG------------------------- 519
consensus_796#0 TCATCACGTTTCGACACGCATTTCAAATACAATATCTTTAAAAATTCTTCCAAGAGA 578
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |