These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1811 fasta sequence [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT-AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA-CCGCTGCTGCCATTGCTTATGGCTTGGATAAAAAAACTACCAGCGAACGCAACGTCCTTATCTTTGATCTTGGTGGTGGCACCTTTGATGTCTCAATTCTGACCATTGAAGATGGCATTTTCGAGGTCAAGTCAACAGCAGGAGATACCCATCTTGGCGGCGAAGATTTTGATAACCGTATGGGTAATCACTTTGTACAAGAATTCAAACGGAAATATAAAAAAGATTTAACTGCAAATAAACGCGC-TCTTCGTCGTTTGAGAACAGCTTGTGAGCGTGCGAAACGCAC-TCTGTCTTCGTCTACTCAAGCTAGCATTGAAATTGATTCGCTCTATGAGGGAATCGATTTTTATACATCGATCACCAGAGCTCGATTTGAAGAACTCTGTGCTGATCTCTTCAGAGGAACACTCGAGCCAGTAGAAAAATCATTACGCGATGCTAAAATGGATAAAGCTCAGATTCACGATATCGTTCTGGTTGGTGGATCCACGCGAATTCCTAAGATTCAAAAACTTCTGCAAAGACTTCTTCAATGGAAAGGAATTGAATAAATCTATCAATCCTGATGAGGCTGTGGCATATGGAGCTGCTGTGC-AAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTACAAGATCTATTACTTCTTGATGTAACACCTCTATCTCTTGGTATTGAAACTGCTGGTGGTGTTATGACTGCTCTTATTAAGAGAAATACTACCATTCCAACAAAGCAAACTCAAACCTTCACTACATATGCTGATAATCAACCAGGTGTATTGATTCAAGTCTATGAAGGAGAACGTGCTATGACGAAAGATAACAATCTGTTAGGTAAATTTGAGCTCAGCGGCATTCCTCCAGCTCCTCGAGGAGTTCCTCAAATTGAAGTCACCTTTGATATCGATGCCAATGGTATTCTCAATGTCTCTGCAGTTGATAAATCTACTGGTAAAGAGAACAAAATCACTATTACCAACGATAAAGGTCGTCTCAGCAAAGAAGATATCGAAAGGATGGTCAACGAAGCTGAGAAATATCGTAGCGAAGACGAAAAACAAAAAGAAACTATCGCTGCTAAGAATGGTCTTGAGTCTTACTGCTTCAACATGAAGAGTACAGTGGAAGANNAGAAGTTGAAGGATAAAATCAGCGCCAGTGACAAACAAGTTGTACTGGATAAATGCAACGATATCATT] [+] EMBL BI946410 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAACGAGCCCACCCGCTGCTGCCATTGCTTATGGCT ] [+] EMBL BE844576 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA CCGCTGCT ] [+] EMBL BI946539 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAAATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGTAAATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGAC ] [+] EMBL BE844580 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCTAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTGTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGATGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGA ] [+] EMBL BI946535 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAAATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATG TTTACGTATTATTAACGAGCCCACCCGCTGCTGCCAT ] [+] EMBL BI946426 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAAATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCACGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTt ] [+] EMBL BI946413 [ TTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAACGAGCCCA CCGCTGCTGCCATTGCTg ] [+] EMBL BI946533 [ TTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA CCGCTGCTGCCATTGCTT ] [+] EMBL BI512241 [ ATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAAATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGA ] [+] EMBL BI512627 [ GTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAAT ] [+] EMBL BI511692 [ GTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGC ] [+] EMBL BI946530 [ CACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA CCGCTGCTGCCATTGCTTATGGCTTGGATAAAAAAACTACCAGCGAACGCAACGTCCTTATCTTTGATCTTGGTGGTGGCACCTTTGATGTCTCAATTCTGACCATTGAAGATGGCATTTTCGAGGTCAAGTCAACAGCAGGAGATACCCATCTTGGTGGCGAAGATTTTGATAACCGTATGGGTAATCACTTTGTACAAGAATTCAAACGTAAATATAA ] [+] EMBL BI510653 [ CCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA CCGCTGCTGCCATTGCTTATGGCTTGGATAAAAAAACTACCAGCGAACGCAACGTCC ] [+] EMBL BI946442 [ CTTTGATCTTGGTGGTGGCACCTTTGATGTCTCAATTCTGACCATTGAAGATGGCATTTTCGAGGTCAAGTCAACAGCAGGAGATACCCATCTTGGCGGCGAAGATTTTGATAACCGTATGGTTAATCACTTTGTACAAGAATTCAAACGGAAATATAAAAAAGATTTAACTGCAAATAAACGCGC TCTTCGTCGTTTGAGAACAGCTTGTGAGCGTGCGAAACGCAC TCTGTCTTCGTCTACTCAAGCTAGCATTGAAATTGATTCGCTCTATGAGGGAATCGATTTTTATACATCGATCACCAGAGCTCGATTTGAAGAACTCTGTGCTGATCTCTTCAGAGGAACACTCGAGCCAGTAGAAAAATCATTACGCGATGCTAAAATGGATAAAGCTCAGATTCACGATATCGTTCTGGTTGGTGGATCCACGCGAATTCCTAAGATTCAAAAACTTCTGCAAAGACTTCTTCAATGGAAAGGAATTGAATAAATCTATCAATCCTGATGAGGCTGTGGCATATGGAGCTGCTGTGCAAAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTA ] [-] EMBL BI946540 [ GCGCTTCTTCGTCGTTTGAG ACAGCTTGTGAGCGTGCGAAACGCACTTCTGTCTTCGTCTACTCAAGCTAGCATTGAAATTGATTCGCTCTATGAGGGAATCGATTTTTATACATCGATCACCAGAGCTCGATTTGAAGAACTCTGTGCTGATCTCTTCAGAGGAACACTCGAGCCAGTAGAAAAATCATTACGCGATGCTAAAATGGATAAAGCTCAGATTCACGATATCGTTCTGGTTGGTGGATCCACGCGAATTCCTAAGATTCAAAAACTTCTGC AAGACTTCTTCAATGGAAAGGAATTGAATAAATCTATCAATCCTGATGAGGCTGTGGCATATGGAGCTGCTGTGC AAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTACAAGATCTATTACTTCTTGATGTAACACCTCTATCTCTTGGTATTGAAACTGCTGGTGGTGTTATGACTGCTCTTATTAAGAGAAATACTACCATTCCAACAAAGCAAACTCAAACCTTCACTACATATGCTGATAATCAACCAGGTGTATTGATTCAAGTCTATGAAGGAGAACGTGCTATGACGAAAGATAACAATCTGTTAGGTAAATTTGAGCTCAGCGG ] [+] EMBL BI504420 [ CATATGGAGCTGCTGTGC AAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTACAAGATCTATTACTTCTTGATGTAACACCTCTATCTCTTGGTATTGAAACTGCTGGTGGTGTTATGACTGCTCTTATTAAGAGAAATACTACCATTCCAACAAAGCAAACTCAAACCTTCACTACATATGCTGATAATCAACCAGGTGTATTGATTCAAGTCTATGAAGGAGAACGTGCTATGACGAAAGATAACAATCTGTTAGGTAAATTTGAGCTCAGCGGCATTCCTCCAGCTCCTCGAGGAGTTCCTCAAATTGAAGTCACCTTTGATATCGATGCCAATGGTATTCTCAATGTCTCTGCAGTTGATAAATCTACTGGTAAAGAGAACAAAATCACTATTACCAACGATAAAGGTCGTCTCAGCAAAGAAGATATCGAAAGGATGGTCAACGAAGCTGAGAAATATCGTAGCGAAGACGAAAAACAAAAAGAAACTATCGCTGCTAAGAATGGTCTTGAGTCTTACTGCTTCAACATGAAGAGTACAGTGGAAGANNAGAAGTTGAAGGATAAAATCAGCGCCAGTGACAAACAAGTTGTACTGGATAAATGCAACGATATCATT] consensusID : consensus_8#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 620 fasta sequence [ATCAGCGCCAGTGACAAACAAGTTGTACTGGATAAATGCAACGATATCATTAAATGGCTCGATGCTAACCAATTAGCTGATAAAGAAGAATACGAACATAAACAGAAAGAATTAGAAGCTATATGCAATCCTATTGTCACAAAATTGTATCAGGGCACTGGTGGGATGCCTGGTGGAATGCCTGGTGGAATGCCTGGTGGCTTCCCAGGAGCTGGTGGCGGTGCTCCTGGTGGTGGTGCATCTGGACCTACCATCGAAGAAGTCGATTAAATCGATTACTCGCTTGCCCACTGCCCTCTCCATGATTTACTCCGTTGCAAAGGATAACAACTTCAAGAACATAGAATTAGACAGCTTCGGTCTTTCGTTCCTAAATATATAATTTATCTAGGTTTTATAATTTTTTTTATATCATTGTAAAAATCACTTCTGATTTATTTATTTTGTTCTACTGTAAAACTAGACAAATAATTTATTTCATTAGTAATTTCCTACAGATTATAATAAACGTAAAAAAAAACTATTGTACTTATATTTTGAAAATNNGGATAAAAAAGATCAGTTGTTGGTTTTCTATGTTCAAAAAACTGAAAATATAAAACAATCCCTGAAATACAAAA] [-] EMBL BI946531 [ATCAGCGCCAGTGACAAACAAGTTGTACTGGATAAATGCAACGATATCATTAAATGGCTCGATGCTAACCAATTAGCTGATAAAGAAGAATACGAACATAAACAGAAAGAATTAGAAGCTATATGCAATCCTATTGTCACAAAATTGTATCAGGGCACTGGTGGGATGCCTGGTGGAATGCCTGGTGGAATGCCTGGTGGCTTCCCAGGAGCTGGTGGCGGTGCTCCTGGTGGTGGTGCATCTGGACCTACCATCGAAGAAGTCGATTAAATCGATTACTCGCTTGCCCACTGCCCTCTCCATGATTTACTCCGTTGCAAAGGATAACAACTTCAAGAACATAGAATTAGACAGCTTCGGTCTTTCGTTCCTAAATATATAATTTATCTAGGTTTTATAATTTTTTTTATATCATTGTAAAAATCACTTCTGATTTATTTATTTTGTTCTACTGTAAAACTAGACAAATAATTTATTTCATTAGTAATTTCCTACAGATTATAATAAACGTAAAAAAAAACTATTGTACTTATATTTTGAAAATGTGGATAAAAAAGATCAGTTGTTGGTTTTCTATGTTCAAAAAACTGAAAATATAAAACAATCCCTGAAATACAAAA] [+] EMBL BI516835 [ TCGATGCTAACCAATTAGCTGATAAAGAAGAATACGAACATAAACAGAAAGAATTAGAAGCTATATGCAATCCTATTGTCACAAAATTGTATCAGGGCACTGGTGGGATGCCTGGTGGAATGCCTGGTGGAATGCCTGGTGGCTTCCCAGGAGCTGGTGGCGGTGCTCCTGGTGGTGGTGCATCTGGACCTACCATCGAAGAAGTCGATTAAATCGATTACTCGCTTGCCCACTGCCCTCTCCATGATTTACTCCGTTGCAAAGGATAACAACTTCAAGAACATAGAATTAGACAGCTTCGGTCTTTCGTTCCTAAATATATAATTTATCTAGGTTTTATAATTTTTTTTATATCATTGTAAAAATCACTTCTGATTTATTTATTTTGTTCTACTGTAAAACTAGACAAATAATTTATTTCATTAGTAATTTCCTACAGATTATAATAAACGTAAAAAAAAACTATTGTACTTATATTTTGAAAATNNGGATAAAAAAGATCAGTTGTTGGTTTTCTATGTTCAAAAAACTGAAAA ] consensusID : consensus_8#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 448 fasta sequence [CAGTTTTTTGAACATAGAAAACCAACAACTGATCTTTTTTAGGCACATTTTCAAAATAAAAGTACAATAGTTTTTTTTTACGTTTATTATAATCTGTAGGAAATTACTAATGAAATAAATTATTTGTCTAGTTTTACAGTACCAACAAAATAAATAAATCACAAGTGATTTTTACAATGATATAAAAAAAATTATAAAACCTACATCAATTATATATTTAGGAACGAAAGACCGAAGCTGTCTAATTCTATGTTCTTGAAGTTGTTATCCTTTGCAACGGAGTAAATCATGGAGAGGGCAGTGGGCAAGCGAGTATTCGATTTAATCGACTCCTTCGCATGGTAGGTCCCAGATGCATCATCCACCACGTAGCACCGCCACCACCTCCCTTGGGGAAGCCCACCCACTTCATTTCCCCCCAGCGCATTCCCACCACGGCTTCCCCTAC] [+] EMBL BE844484 [CAGTTTTTTGAACATAGAAAACCAACAACTGATCTTTTTTAGGCACATTTTCAAAATAAAAGTACAATAGTTTTTTTTTACGTTTATTATAATCTGTAGGAAATTACTAATGAAATAAATTATTTGTCTAGTTTTACAGTACCAACAAAATAAATAAATCACAAGTGATTTTTACAATGATATAAAAAAAATTATAAAACCTACATCAATTATATATTTAGGAACGAAAGACCGAAGCTGTCTAATTCTATGTTCTTGAAGTTGTTATCCTTTGCAACGGAGTAAATCATGGAGAGGGCAGTGGGCAAGCGAGTATTCGATTTAATCGACTCCTTCGCATGGTAGGTCCCAGATGCATCATCCACCACGTAGCACCGCCACCACCTCCCTTGGGGAAGCCCACCCACTTCATTTCCCCCCAGCGCATTCCCACCACGGCTTCCCCTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGA 60 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 AGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTA 120 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 TTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAA 180 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 TCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGC 240 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 CAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGG 300 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 TCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGT 360 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 AAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTT 420 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 CCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCT 480 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 GGGAAAAACTGTCAGTAATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCG 540 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 TCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGA 600 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 GCCCACCGCTGCTGCCATTGCTTATGGCTTGGATAAAAAAACTACCAGCGAACGCAACGT 660 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 CCTTATCTTTGATCTTGGTGGTGGCACCTTTGATGTCTCAATTCTGACCATTGAAGATGG 720 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 CATTTTCGAGGTCAAGTCAACAGCAGGAGATACCCATCTTGGCGGCGAAGATTTTGATAA 780 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 CCGTATGGGTAATCACTTTGTACAAGAATTCAAACGGAAATATAAAAAAGATTTAACTGC 840 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 AAATAAACGCGCTCTTCGTCGTTTGAGAACAGCTTGTGAGCGTGCGAAACGCACTCTGTC 900 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 TTCGTCTACTCAAGCTAGCATTGAAATTGATTCGCTCTATGAGGGAATCGATTTTTATAC 960 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 ATCGATCACCAGAGCTCGATTTGAAGAACTCTGTGCTGATCTCTTCAGAGGAACACTCGA 1020 consensus_8#1 ------------------------------------------------------------ consensus_8#2 ------------------------------------------------------------ consensus_8#0 GCCAGTAGAAAAATCATTACGCGATGCTAAAATGGATAAAGCTCAGATTCACGATATCGT 1080 consensus_8#1 --------------------------ATCAGCGCCAGTGACAAACAAGTTGTACTGGATA 34 consensus_8#2 ------------------------------------------------------------ consensus_8#0 TCTGGTTGGTGGATCCACGCGAATTCCTAAGATTCAAAAACTTCTGCAAAGACTTCTTCA 1140 consensus_8#1 AATGCAACGATATCATTAAATGGCTCGATGCTAACCAATTAGCTGATAAAGAAG--AATA 92 consensus_8#2 ------------------------------------------------------------ consensus_8#0 ATGGAAAGGAATTGAATAAATCTATCAATCCTGATGAGGCTGTGGCATATGGAGCTGCTG 1200 consensus_8#1 CGAACATAAACAGAAAGAATTAGAAGCTATATGCAATCCTATTGTCACAAAATTGTATCA 152 consensus_8#2 ------------------------------------------------------------ consensus_8#0 TGCAAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTACAAGATCTATTACTTCTTG 1260 consensus_8#1 GGGCACTGGTGGGAT-GCCTGGTGGAATGCCTGGTGGAATGCCT--GGTGGCTTCCCAGG 209 consensus_8#2 ---CAGTTTTTTGA--ACATAGAAAACCAACAACTGATCTTTTTTAGGCACATTTTCAAA 55 consensus_8#0 ATGTAACACCTCTATCTCTTGGTATTGAAACTGCTGGTGGTGTTATGACTGCTCTTATTA 1320 * * * * * * ** * * * consensus_8#1 AGCTGGTGGCGGTGCTCCTGGTGGTGGTGCATCTGGACCTACCATCGAAGAAGTCGATTA 269 consensus_8#2 ATAAAAGTACAATAGTTTTTTTTTACGTTTATTATAATCTGTAG--GAAATTACTAATGA 113 consensus_8#0 AGAGAAATACTACCATTCCAACAAA-GCAAACTCAAACCT-TCACTACATATGCTGAT-- 1376 * * * * * * ** * ** consensus_8#1 AATCGATTACTCGCTTGCCCACTGCCCTCTCCATGATTTAC-TCCGTTGCAAAGGATAAC 328 consensus_8#2 AATAAATTATTTGTCTAGTT-TTACAGTACCAACAAAATAAATAAATCACAAGTGATTTT 172 consensus_8#0 AATCAACCAGGTGTATTGATTCAAGTCTATGAAGGAGAACGTGCTATGACGAAAGATAAC 1436 *** * * * * * * * * * * *** consensus_8#1 AA-CTTCAAGA-ACATA-GAATTAGACAGCTTCGGTCTTTCGTTCCTAAATATATAATTT 385 consensus_8#2 TA-CAATGATATAAAAA-AAATTATAAAACCTACATCAATTATATATTTAGGAACGAAAG 230 consensus_8#0 AATCTGTTAGGTAAATTTGAGCTCAGCGGCATTCCTCCAGCTCCTCGAGGAGTTCCTCAA 1496 * * * * * * * * * ** consensus_8#1 ATCTAGGTTTTATAATTTTTTTTATATCATTGTAAAAATCACTTCTGATTTATTTATTTT 445 consensus_8#2 ACCGAAGCTGTCTAATTCTATGT-TCTTGAAGTTGTTATCCTTTGCAACGGAGTAAATCA 289 consensus_8#0 ATTGAAGTCACCTT-TGATATCGATGCCAATGGTATTCTCAATGTCTCTGCAGTTGATAA 1555 * * * * * * * * * ** * * * * consensus_8#1 GTTCTACTGTAAAACTAGACAAATAATTTATTTCATTAGTAA---TTTCCTACAGATTAT 502 consensus_8#2 TGGAGAGGGCAG---TGGGCAAGCGAGTATTCGATTTAATCG---ACTCCTTCGCATGGT 343 consensus_8#0 ATCTACTGGTAAAGAGAACAAAATCACTATTACCAACGATAAAGGTCGTCTCAGCAAAGA 1615 * * ** * * * * ** * consensus_8#1 AATAAACGTAAAAAAAAACTATTGTACTTA--TATTTTG------AAAATNNGGATAAAA 554 consensus_8#2 AGGTCCCAGATGCATCATCCACCACGTAGC--ACCGCCA------CCACCTCCCTTGGGG 395 consensus_8#0 AGATATCGAAAGGATGGTCAACGAAGCTGAGAAATATCGTAGCGAAGACGAAAAACAAAA 1675 * * * * * * * consensus_8#1 AAGATCAGTTGTTGGTTTTCTATGTTCAAAAAACTGAAAATATAAAACAATCCCTGAAAT 614 consensus_8#2 AAGCCCACCCACT--TCATTTCCCCCCAGCGCATTCCCACCACG--GCTTCCCCTAC--- 448 consensus_8#0 AGAAACTATCGCTGCTAAGAATGGTCTTGAGTCTTACTGCTTCAACATGAAGAGTACAGT 1735 * * * * * * consensus_8#1 ACAAAA------------------------------------------------------ 620 consensus_8#2 ------------------------------------------------------------ consensus_8#0 GGAAGANNAGAAGTTGAAGGATAAAATCAGCGCCAGTGACAAACAAGTTGTACTGGATAA 1795 consensus_8#1 ---------------- consensus_8#2 ---------------- consensus_8#0 ATGCAACGATATCATT 1811 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |