These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_852#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 503 fasta sequence [ACAAACTCGGCAAGGGAACGCAACATCTCGTTCGAACGCACATTGTCGAGCGAAGAAGAGATCACGTCGGCGAGACGACGTCCTTTCCGATAACCGCCGCGTTTACGAGAAAGGGACAGACAGAAGGGGGAGAGCGTAGCGGTGTCCACGCCAACGAAAACACCAACGAAGCGGAATTCTGCGGTTTTCGCGAGGAGGGCGAGGTCGGTGTTAAACCAGCAAGATTACCGGCCGCGGCGGTTGCGCCAAATACTGTGGTACAGCTACTTCACCCGGCAACATTTCATTCTCCAGCTTTCGACAGTCCTTCACCTCCAATGTTAACTACCTGAAACGGAGGTTCTCGTCAGGGGATTTGAGCTCGGAGCTCGACGATGAACCAAGCACAGACTCCGGGCTGGCCTCCATGGCCAGGGATTCGTCATCCCAATCGTATCAAGCGGTGCCCGAACGCCCGTTGCAGTCCCAACCTACGCCGGTTCCGCCGGCCAGCCAACCGCCCG] [+] EMBL BI515381 [ACAAACTCGGCAAGGGAACGCAACATCTCGTTCGAACGCACATTGTCGAGCGAAGAAGAGATCACGTCGGCGAGACGACGTCCTTTCCGATAACCGCCGCGTTTACGAGAAAGGGACAGACAGAAGGGGGAGAGCGTAGCGGTGTCCACGCCAACGAAAACACCAACGAAGCGGAATTCTGCGGTTTTCGCGAGGAGGGCGAGGTCGGTGTTAAACCAGCAAGATTACCGGCCGCGGCGGTTGCGCCAAATACTGTGGTACAGCTACTTCACCCGGCAACATTTCATTCTCCAGCTTTCGACAGTCCTTCACCTCCAATGTTAACTACCTGAAACGGAGGTTCTCGTCAGGGGATTTGAGCTCGGAGCTCGACGATGAACCAAGCACAGACTCCGGGCTGGCCTCCATGGCCAGGGATTCGTCATCCCAATCGTATCAAGCGGTGCCCGAACGCCCGTTGC ] [+] EMBL BI510950 [ GAGCGAAGAAGAGATCACGTCGGCGAGACGACGTCCTTTCCGATAACCGCCGCGTTTACGAGAAAGGGACAGACAGAAGGGGGAGAGCGTAGCGGTGTCCACGCCAACGAAAACACCAACGAAGCGGAATTCTGCGGTTTTCGCGAGGAGGGCGAGGTCGGTGTTAAACCAGCAAGATTACCGGCCGCGGCGGTTGCGCCAAATACTGTGGTACAGCTACTTCACCCGGCAACATTTCATTCTCCAGCTTTCGACAGTCCTTCACCTCCAATGTTAACTACCTGAAACGGAGGTTCTCGTCAGGGGATTTGAGCTCGGAGCTCGACGATGAACCAAGCACAGACTCCGGGCTGGCCTCCATGGCCAGGGATTCGTCATCCCAATCGTATCAAGCGGTGCCCGAACGCCCGTTGCAGTCCCAACCTACGCCGGTTCCGCCGGCCAGCCAACCGCCCG] consensusID : consensus_852#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 403 fasta sequence [TTATTCCACAAACTCGGCAAGGGAACGCAACATCTCGTTCGAACGCACATTGTCGAGCGAAGAAGAGATCACGTCGGCGAGACGACGTCCTTTCCGATAACCGCCGCGTTTACGAGAAAGGGACAGACAGAAGGGGGAGAGCGTNNNGGTGTCCACGCCAACGAAAACACCAACGAAGCGGAATTCTGCGGTTTTCGCGAGGAGGGCGAGGTCGGTGTTAAACCAGCAAGATTACCGGCCGCGGCGGTTGCGCCAAATACTGTGGTACAGCTACTTCACCCGGCAACATTTCATTCTCCAGCTTTCGACAGTCCTTCACCTCCAATGTTAACTACCTGAAACGGAGTTTGTCTTCCAGGTTCTCGTCAGGGGATTTGAGCTCGGAGCTCGACGATGAACCAAG] [+] EMBL BI510780 [TTATTCCACAAACTCGGCAAGGGAACGCAACATCTCGTTCGAACGCACATTGTCGAGCGAAGAAGAGATCACGTCGGCGAGACGACGTCCTTTCCGATAACCGCCGCGTTTACGAGAAAGGGACAGACAGAAGGGGGAGAGCGTNNNGGTGTCCACGCCAACGAAAACACCAACGAAGCGGAATTCTGCGGTTTTCGCGAGGAGGGCGAGGTCGGTGTTAAACCAGCAAGATTACCGGCCGCGGCGGTTGCGCCAAATACTGTGGTACAGCTACTTCACCCGGCAACATTTCATTCTCCAGCTTTCGACAGTCCTTCACCTCCAATGTTAACTACCTGAAACGGAGTTTGTCTTCCAGGTTCTCGTCAGGGGATTTGAGCTCGGAGCTCGACGATGAACCAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_852#0 -------ACAAACTCGGCAAGGGAACGCAACATCTCGTTCGAACGCACATTGTCGAGCGA 53 consensus_852#1 TTATTCCACAAACTCGGCAAGGGAACGCAACATCTCGTTCGAACGCACATTGTCGAGCGA 60 ***************************************************** consensus_852#0 AGAAGAGATCACGTCGGCGAGACGACGTCCTTTCCGATAACCGCCGCGTTTACGAGAAAG 113 consensus_852#1 AGAAGAGATCACGTCGGCGAGACGACGTCCTTTCCGATAACCGCCGCGTTTACGAGAAAG 120 ************************************************************ consensus_852#0 GGACAGACAGAAGGGGGAGAGCGTAGCGGTGTCCACGCCAACGAAAACACCAACGAAGCG 173 consensus_852#1 GGACAGACAGAAGGGGGAGAGCGTNNNGGTGTCCACGCCAACGAAAACACCAACGAAGCG 180 ************************ ********************************* consensus_852#0 GAATTCTGCGGTTTTCGCGAGGAGGGCGAGGTCGGTGTTAAACCAGCAAGATTACCGGCC 233 consensus_852#1 GAATTCTGCGGTTTTCGCGAGGAGGGCGAGGTCGGTGTTAAACCAGCAAGATTACCGGCC 240 ************************************************************ consensus_852#0 GCGGCGGTTGCGCCAAATACTGTGGTACAGCTACTTCACCCGGCAACATTTCATTCTCCA 293 consensus_852#1 GCGGCGGTTGCGCCAAATACTGTGGTACAGCTACTTCACCCGGCAACATTTCATTCTCCA 300 ************************************************************ consensus_852#0 GCTTTCGACAGTCCTTCACCTCCAATGTTAACTACCTGAAACGGAG------------GT 341 consensus_852#1 GCTTTCGACAGTCCTTCACCTCCAATGTTAACTACCTGAAACGGAGTTTGTCTTCCAGGT 360 ********************************************** ** consensus_852#0 TCTCGTCAGGGGATTTGAGCTCGGAGCTCGACGATGAACCAAGCACAGACTCCGGGCTGG 401 consensus_852#1 TCTCGTCAGGGGATTTGAGCTCGGAGCTCGACGATGAACCAAG----------------- 403 ******************************************* consensus_852#0 CCTCCATGGCCAGGGATTCGTCATCCCAATCGTATCAAGCGGTGCCCGAACGCCCGTTGC 461 consensus_852#1 ------------------------------------------------------------ consensus_852#0 AGTCCCAACCTACGCCGGTTCCGCCGGCCAGCCAACCGCCCG 503 consensus_852#1 ------------------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |