Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 876 cluster # 876       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_876#0 length = 537 sequences # 3  
consensusID : consensus_876#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 537
fasta sequence 
                              [CGTGCTTAAATTTACTAGTTTGTTTTGAAAAGGCGGTCGACGATATCG-ATTATTTACATGTCTTCAAAACACGTTGAACTCGGTGCAAATCACCTGTGTGTTCGGCTCGAGAACAGTCGATAAAGAAGGCAAAAGAAGTCACAGAACCAGCAGTAACTTTTTTTGTATCTACCTACTTACTAGTTTGTATAATACTACACACTTGCCTAATTAATCTCTTTTCTCTTTCTCCTTAAATATTATCTAGTTAGTTGACTAACTTCGATTATTATCTATAGCTAAAAAAAAAAATTACAAGACGTATCCCCTCTATCTGTATGTACGTGGAATTTGATATTTATAATCCTTTGCCTCGCGATTTTATCGACGGAGACGAGAAATATCAAAGAAATATTACGATAAAATAATAATGAATTCGATAACGAATAAAACAATGTTATATTATTCAAAATCTGATATTAGGCCTGATCCATTAATCATTGTAAAATTTGTTTTTGGATATATTGTCCTATTAGTCTCGAAAGAATTAATCTTTCT]

[-] EMBL BI505459             [CGTGCTTAAATTTACTAGTTTGTTTTGAAAAGGCGGTCGACGATATCGTATTATTTACATGTCTTCAAAACACGTTGAACTCGGTGCAAATCACCTGTGTGTTCGGCTCGAGAACAGTCGATAAAGAAGGCAAAAGAAGTCACAGAACCAGCAGTAACTTTTTTTGTATCTACCTACTTACTAGTTTGTATAATACTACACACTTACCTAATTAATCTCTTTTCTCTTTCTTCTTAAATATTATCTAGTTAGTTGACTA   TCGATTATTATCTATAGCTAAAATTAAAATTTACAAGACGTATCCCCTCTATCTGTATGTACGTGGAATTTGATATTTATAATCCTTTGCCTCGCGATTTTATCGACGGAGACGAGAAATATCAAAGAAATATTACGATAAAATAATAATGAATTCGATAACGAATAAAACAATGTTATATTATTCAAAATCTGATATTAGGCCTGATCCATTAATCATTGTAAAATTTGTTTTTGGATATATTGTCCTATTAGTCTCGAAAGAATTAATCTTTCT]
[+] EMBL BI507597             [                   TTGTTTTGAAAAGGCGGTCGACGATATCG ATTATTTACATGTCTTCAAAACACGTTGAACTCGGTGCAAATCACCTGTGTGTTCGGCTCGAGAACAGTCGATAAAGAAGGCAAAAGAAGTCACAGAACCAGCAGTAACTTTTTTTGTATCTACCTACTTACTAGTTTGTATAATACTACACACTTGCCTAATTAATCTCTTTTCTCTTTCTCCTTAAATATTATCTAGTTAGTTGACTAACTTCGATTATTATCTATAGCTA                                                                                                                                                                                                                                                                ]
[-] EMBL BI507498             [                                 CGGTCGACGATATCG ATTATTTACATGTCTTCAAAACACGTTGAACTCGGTGCAAATCACCTGTGTGTTCGGCTCGAGAACAGTCGATAAAGAAGGCAAAAGAAGTCACAGAACCNNCAGTAACTTTTTTTGTATCTACCTACTTACTAGTTTGTATAATACTACACACTTGCCTAATTAATCTCTTTTCTCTTTCTCCTTAAATATTATCTAGTTAGTTGACTAACTTCGATTATTATCTATAGAAAAAAAAAAAAA                                                                                                                                                                                                                                                      ]




>consensus_876#0
CGTGCTTAAATTTACTAGTTTGTTTTGAAAAGGCGGTCGACGATATCGATTATTTACATG
TCTTCAAAACACGTTGAACTCGGTGCAAATCACCTGTGTGTTCGGCTCGAGAACAGTCGA
TAAAGAAGGCAAAAGAAGTCACAGAACCAGCAGTAACTTTTTTTGTATCTACCTACTTAC
TAGTTTGTATAATACTACACACTTGCCTAATTAATCTCTTTTCTCTTTCTCCTTAAATAT
TATCTAGTTAGTTGACTAACTTCGATTATTATCTATAGCTAAAAAAAAAAATTACAAGAC
GTATCCCCTCTATCTGTATGTACGTGGAATTTGATATTTATAATCCTTTGCCTCGCGATT
TTATCGACGGAGACGAGAAATATCAAAGAAATATTACGATAAAATAATAATGAATTCGAT
AACGAATAAAACAATGTTATATTATTCAAAATCTGATATTAGGCCTGATCCATTAATCAT
TGTAAAATTTGTTTTTGGATATATTGTCCTATTAGTCTCGAAAGAATTAATCTTTCT

clustalw multiple alignements is not computed in this case
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)